RNA–Protein interactions for RNA: ENST00000406028.1

CLDN5-202, Transcript of claudin 5, humanhuman

TSL 2 BASIC

Gene CLDN5, Length 2,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5-202ENST00000406028 NISCHQ9Y2I1 1504 aa37.62■■■■□ 3.61
CLDN5-202ENST00000406028 CCDC180Q9P1Z9 1646 aa32.58■■■□□ 2.81
CLDN5-202ENST00000406028 ZCCHC6Q5VYS8 1495 aaKnown RBP31.67■■■□□ 2.66
CLDN5-202ENST00000406028 DCAF1Q9Y4B6 1507 aa31.1■■■□□ 2.57
CLDN5-202ENST00000406028 DCAF8L2P0C7V8 631 aa31.09■■■□□ 2.57
CLDN5-202ENST00000406028 SHROOM4Q9ULL8 1493 aa31.05■■■□□ 2.56
CLDN5-202ENST00000406028 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.48
CLDN5-202ENST00000406028 ABCC9O60706 1549 aa30.51■■■□□ 2.47
CLDN5-202ENST00000406028 NACADO15069 1562 aa30.29■■■□□ 2.44
CLDN5-202ENST00000406028 HRCP23327 699 aa30.2■■■□□ 2.42
CLDN5-202ENST00000406028 SUPT5HO00267 1087 aaKnown RBP30.13■■■□□ 2.41
CLDN5-202ENST00000406028 SCRIBQ14160 1630 aa30.06■■■□□ 2.4
CLDN5-202ENST00000406028 RB1CC1Q8TDY2 1594 aa29.95■■■□□ 2.38
CLDN5-202ENST00000406028 PCGF6Q9BYE7 350 aa29.66■■■□□ 2.34
CLDN5-202ENST00000406028 CHIC1Q5VXU3 224 aa29.56■■■□□ 2.32
CLDN5-202ENST00000406028 PPARGC1BQ86YN6 1023 aaKnown RBP29.55■■■□□ 2.32
CLDN5-202ENST00000406028 RSF1Q96T23 1441 aaPredicted RBP29.36■■■□□ 2.29
CLDN5-202ENST00000406028 UNC13AQ9UPW8 1703 aa29.27■■■□□ 2.28
CLDN5-202ENST00000406028 CECR2Q9BXF3 1484 aa29.19■■■□□ 2.26
CLDN5-202ENST00000406028 MROH2BQ7Z745 1585 aa29.07■■■□□ 2.24
CLDN5-202ENST00000406028 BAZ1AQ9NRL2 1556 aaPredicted RBP29.04■■■□□ 2.24
CLDN5-202ENST00000406028 PELP1Q8IZL8 1130 aaKnown RBP29.02■■■□□ 2.24
CLDN5-202ENST00000406028 BICRAQ9NZM4 1560 aa28.97■■■□□ 2.23
CLDN5-202ENST00000406028 PABPN1Q86U42 306 aaKnown RBP eCLIP28.89■■■□□ 2.22
CLDN5-202ENST00000406028 WIZO95785 1651 aa28.85■■■□□ 2.21
CLDN5-202ENST00000406028 LOC105371045A0A1W2PR82 267 aa28.85■■■□□ 2.21
CLDN5-202ENST00000406028 SMARCA4P51532 1647 aa28.82■■■□□ 2.2
CLDN5-202ENST00000406028 TRIM26Q12899 539 aaPredicted RBP28.77■■■□□ 2.2
CLDN5-202ENST00000406028 TOP2AP11388 1531 aaKnown RBP28.58■■■□□ 2.17
CLDN5-202ENST00000406028 ZEB1P37275 1124 aaPredicted RBP28.48■■■□□ 2.15
CLDN5-202ENST00000406028 SCAF1Q9H7N4 1312 aaKnown RBP28.46■■■□□ 2.15
CLDN5-202ENST00000406028 PEG3Q9GZU2 1588 aa28.43■■■□□ 2.14
CLDN5-202ENST00000406028 TRIM41Q8WV44 630 aa28.31■■■□□ 2.12
CLDN5-202ENST00000406028 CCDC88BA6NC98 1476 aa28.31■■■□□ 2.12
CLDN5-202ENST00000406028 SMARCA2P51531 1590 aa28.31■■■□□ 2.12
CLDN5-202ENST00000406028 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
CLDN5-202ENST00000406028 EIF4G1Q04637 1599 aaKnown RBP28.18■■■□□ 2.1
CLDN5-202ENST00000406028 BAZ1BQ9UIG0 1483 aaKnown RBP28.17■■■□□ 2.1
CLDN5-202ENST00000406028 MYT1Q01538 1121 aa28.08■■■□□ 2.08
CLDN5-202ENST00000406028 NCAPD3P42695 1498 aa27.96■■■□□ 2.07
CLDN5-202ENST00000406028 HMGXB3Q12766 1538 aa27.94■■■□□ 2.06
CLDN5-202ENST00000406028 ABCC8Q09428 1581 aa27.83■■■□□ 2.05
CLDN5-202ENST00000406028 ACIN1Q9UKV3 1341 aaKnown RBP27.83■■■□□ 2.05
CLDN5-202ENST00000406028 FAM9AQ8IZU1 332 aaPredicted RBP27.81■■■□□ 2.04
CLDN5-202ENST00000406028 EHMT2Q96KQ7 1210 aa27.81■■■□□ 2.04
CLDN5-202ENST00000406028 NEUROD1Q13562 356 aa27.75■■■□□ 2.03
CLDN5-202ENST00000406028 WRNQ14191 1432 aaPredicted RBP eCLIP27.65■■■□□ 2.02
CLDN5-202ENST00000406028 CC2D2AQ9P2K1 1620 aa27.58■■■□□ 2.01
CLDN5-202ENST00000406028 GTF3C3Q9Y5Q9 886 aa27.58■■■□□ 2.01
CLDN5-202ENST00000406028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.55■■■□□ 2
CLDN5-202ENST00000406028 EEA1Q15075 1411 aa27.51■■□□□ 1.99
CLDN5-202ENST00000406028 CCER1Q8TC90 406 aaPredicted RBP27.49■■□□□ 1.99
CLDN5-202ENST00000406028 CENPBP07199 599 aaPredicted RBP27.48■■□□□ 1.99
CLDN5-202ENST00000406028 SYNJ1O43426 1573 aa27.46■■□□□ 1.99
CLDN5-202ENST00000406028 DIEXFQ68CQ4 756 aaKnown RBP27.45■■□□□ 1.99
CLDN5-202ENST00000406028 CFTRP13569 1480 aa27.45■■□□□ 1.98
CLDN5-202ENST00000406028 SOGA1O94964 1423 aa27.42■■□□□ 1.98
CLDN5-202ENST00000406028 TOP2BQ02880 1626 aa27.34■■□□□ 1.97
CLDN5-202ENST00000406028 CSRNP3Q8WYN3 585 aa27.33■■□□□ 1.97
CLDN5-202ENST00000406028 CADPSQ9ULU8 1353 aa27.3■■□□□ 1.96
CLDN5-202ENST00000406028 PRDM2Q13029 1718 aa27.28■■□□□ 1.96
CLDN5-202ENST00000406028 BIVM-ERCC5R4GMW8 1640 aa27.28■■□□□ 1.96
CLDN5-202ENST00000406028 RUSC2Q8N2Y8 1516 aa27.26■■□□□ 1.96
CLDN5-202ENST00000406028 CUX1P39880 1505 aa27.15■■□□□ 1.94
CLDN5-202ENST00000406028 GOLGA3Q08378 1498 aa27.13■■□□□ 1.93
CLDN5-202ENST00000406028 TNIKQ9UKE5 1360 aa27.12■■□□□ 1.93
CLDN5-202ENST00000406028 CEP164Q9UPV0 1460 aa27.09■■□□□ 1.93
CLDN5-202ENST00000406028 UBTFP17480 764 aaKnown RBP27.07■■□□□ 1.92
CLDN5-202ENST00000406028 KIF21BO75037 1637 aa27.06■■□□□ 1.92
CLDN5-202ENST00000406028 CEP162Q5TB80 1403 aa27■■□□□ 1.91
CLDN5-202ENST00000406028 FANCD2Q9BXW9 1451 aa26.99■■□□□ 1.91
CLDN5-202ENST00000406028 ZNF316A6NFI3 1004 aaPredicted RBP26.97■■□□□ 1.91
CLDN5-202ENST00000406028 TTBK1Q5TCY1 1321 aaPredicted RBP26.96■■□□□ 1.91
CLDN5-202ENST00000406028 YTHDC1Q96MU7 727 aaKnown RBP26.95■■□□□ 1.9
CLDN5-202ENST00000406028 KIF27Q86VH2 1401 aa26.95■■□□□ 1.9
CLDN5-202ENST00000406028 LAMC3Q9Y6N6 1575 aa26.94■■□□□ 1.9
CLDN5-202ENST00000406028 NESP48681 1621 aa26.88■■□□□ 1.89
CLDN5-202ENST00000406028 RAPGEF2Q9Y4G8 1499 aa26.84■■□□□ 1.89
CLDN5-202ENST00000406028 FGD5Q6ZNL6 1462 aa26.82■■□□□ 1.88
CLDN5-202ENST00000406028 ERICH3Q5RHP9 1530 aa26.82■■□□□ 1.88
CLDN5-202ENST00000406028 PRXQ9BXM0 1461 aa26.81■■□□□ 1.88
CLDN5-202ENST00000406028 DNMBPQ6XZF7 1577 aa26.8■■□□□ 1.88
CLDN5-202ENST00000406028 PDS5BQ9NTI5 1447 aa26.78■■□□□ 1.88
CLDN5-202ENST00000406028 MIER1Q8N108 512 aa26.77■■□□□ 1.88
CLDN5-202ENST00000406028 CUX2O14529 1486 aa26.76■■□□□ 1.87
CLDN5-202ENST00000406028 DNAJC5BQ9UF47 199 aa26.74■■□□□ 1.87
CLDN5-202ENST00000406028 TOPBP1Q92547 1522 aa26.73■■□□□ 1.87
CLDN5-202ENST00000406028 CLIP1P30622 1438 aa26.72■■□□□ 1.87
CLDN5-202ENST00000406028 POLA1P09884 1462 aaPredicted RBP26.63■■□□□ 1.85
CLDN5-202ENST00000406028 IGF1RP08069 1367 aa26.62■■□□□ 1.85
CLDN5-202ENST00000406028 URB2Q14146 1524 aaKnown RBP26.59■■□□□ 1.85
CLDN5-202ENST00000406028 ABCA10Q8WWZ4 1543 aa26.59■■□□□ 1.85
CLDN5-202ENST00000406028 RAD54L2Q9Y4B4 1467 aa26.55■■□□□ 1.84
CLDN5-202ENST00000406028 KIF21AQ7Z4S6 1674 aa26.54■■□□□ 1.84
CLDN5-202ENST00000406028 CARMIL1Q5VZK9 1371 aa26.53■■□□□ 1.84
CLDN5-202ENST00000406028 VPS8Q8N3P4 1428 aa26.53■■□□□ 1.84
CLDN5-202ENST00000406028 RANGAP1P46060 587 aaPredicted RBP26.49■■□□□ 1.83
CLDN5-202ENST00000406028 HNRNPUL2Q1KMD3 747 aaKnown RBP26.42■■□□□ 1.82
CLDN5-202ENST00000406028 APLP2Q06481 763 aa26.41■■□□□ 1.82
CLDN5-202ENST00000406028 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms