RNA–Protein interactions for RNA: ENST00000528515.5

MVB12A-204, Transcript of multivesicular body subunit 12A, humanhuman

TSL 5 BASIC

Gene MVB12A, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12A-204ENST00000528515 NISCHQ9Y2I1 1504 aa45.46■■■■■ 4.87
MVB12A-204ENST00000528515 CCDC180Q9P1Z9 1646 aa40.45■■■■■ 4.07
MVB12A-204ENST00000528515 ABCC9O60706 1549 aa39.46■■■■□ 3.91
MVB12A-204ENST00000528515 RB1CC1Q8TDY2 1594 aa37.93■■■■□ 3.66
MVB12A-204ENST00000528515 ZCCHC6Q5VYS8 1495 aaKnown RBP37.91■■■■□ 3.66
MVB12A-204ENST00000528515 NACADO15069 1562 aa37.89■■■■□ 3.66
MVB12A-204ENST00000528515 DCAF8L2P0C7V8 631 aa37.89■■■■□ 3.66
MVB12A-204ENST00000528515 MYO15BQ96JP2 1530 aa37.67■■■■□ 3.62
MVB12A-204ENST00000528515 DCAF1Q9Y4B6 1507 aa37.61■■■■□ 3.61
MVB12A-204ENST00000528515 UNC13AQ9UPW8 1703 aa37.22■■■■□ 3.55
MVB12A-204ENST00000528515 SCRIBQ14160 1630 aa36.92■■■■□ 3.5
MVB12A-204ENST00000528515 DNAJC5BQ9UF47 199 aa36.79■■■■□ 3.48
MVB12A-204ENST00000528515 PABPN1Q86U42 306 aaKnown RBP eCLIP36.77■■■■□ 3.48
MVB12A-204ENST00000528515 BICRAQ9NZM4 1560 aa36.74■■■■□ 3.47
MVB12A-204ENST00000528515 SHROOM4Q9ULL8 1493 aa36.34■■■■□ 3.41
MVB12A-204ENST00000528515 EIF4G1Q04637 1599 aaKnown RBP35.76■■■■□ 3.32
MVB12A-204ENST00000528515 CC2D2AQ9P2K1 1620 aa35.67■■■■□ 3.3
MVB12A-204ENST00000528515 CECR2Q9BXF3 1484 aa35.57■■■■□ 3.28
MVB12A-204ENST00000528515 SMARCA4P51532 1647 aa35.31■■■■□ 3.24
MVB12A-204ENST00000528515 BAZ1AQ9NRL2 1556 aaPredicted RBP35.26■■■■□ 3.24
MVB12A-204ENST00000528515 MROH2BQ7Z745 1585 aa35.04■■■■□ 3.2
MVB12A-204ENST00000528515 SMARCA2P51531 1590 aa35■■■■□ 3.19
MVB12A-204ENST00000528515 ATAD2BQ9ULI0 1458 aa34.97■■■■□ 3.19
MVB12A-204ENST00000528515 PEG3Q9GZU2 1588 aa34.9■■■■□ 3.18
MVB12A-204ENST00000528515 NCAPD3P42695 1498 aa34.88■■■■□ 3.17
MVB12A-204ENST00000528515 HMGXB3Q12766 1538 aa34.82■■■■□ 3.16
MVB12A-204ENST00000528515 WIZO95785 1651 aa34.77■■■■□ 3.16
MVB12A-204ENST00000528515 BAZ1BQ9UIG0 1483 aaKnown RBP34.74■■■■□ 3.15
MVB12A-204ENST00000528515 RSF1Q96T23 1441 aaPredicted RBP34.66■■■■□ 3.14
MVB12A-204ENST00000528515 TOP2AP11388 1531 aaKnown RBP34.35■■■■□ 3.09
MVB12A-204ENST00000528515 ERCC6Q03468 1493 aa34.14■■■■□ 3.06
MVB12A-204ENST00000528515 NESP48681 1621 aa34.05■■■■□ 3.04
MVB12A-204ENST00000528515 LAMC3Q9Y6N6 1575 aa34.04■■■■□ 3.04
MVB12A-204ENST00000528515 CUX2O14529 1486 aa34.03■■■■□ 3.04
MVB12A-204ENST00000528515 SUPT5HO00267 1087 aaKnown RBP33.97■■■■□ 3.03
MVB12A-204ENST00000528515 CCDC88BA6NC98 1476 aa33.89■■■■□ 3.02
MVB12A-204ENST00000528515 CADPSQ9ULU8 1353 aa33.88■■■■□ 3.01
MVB12A-204ENST00000528515 KIF21AQ7Z4S6 1674 aa33.8■■■■□ 3
MVB12A-204ENST00000528515 DNAJC5Q9H3Z4 198 aa33.78■■■■□ 3
MVB12A-204ENST00000528515 PRDM2Q13029 1718 aa33.78■■■■□ 3
MVB12A-204ENST00000528515 CFTRP13569 1480 aa33.74■■■□□ 2.99
MVB12A-204ENST00000528515 PDS5BQ9NTI5 1447 aa33.73■■■□□ 2.99
MVB12A-204ENST00000528515 THOC2Q8NI27 1593 aaKnown RBP33.56■■■□□ 2.96
MVB12A-204ENST00000528515 FANCD2Q9BXW9 1451 aa33.55■■■□□ 2.96
MVB12A-204ENST00000528515 CEP164Q9UPV0 1460 aa33.51■■■□□ 2.96
MVB12A-204ENST00000528515 MRC2Q9UBG0 1479 aa33.41■■■□□ 2.94
MVB12A-204ENST00000528515 WDR62O43379 1518 aa33.31■■■□□ 2.92
MVB12A-204ENST00000528515 URB2Q14146 1524 aaKnown RBP33.2■■■□□ 2.91
MVB12A-204ENST00000528515 DNMBPQ6XZF7 1577 aa33.07■■■□□ 2.88
MVB12A-204ENST00000528515 TOPBP1Q92547 1522 aa33.05■■■□□ 2.88
MVB12A-204ENST00000528515 ABCC8Q09428 1581 aa33.04■■■□□ 2.88
MVB12A-204ENST00000528515 CUX1P39880 1505 aa32.87■■■□□ 2.85
MVB12A-204ENST00000528515 POLA1P09884 1462 aaPredicted RBP32.77■■■□□ 2.84
MVB12A-204ENST00000528515 IFT140Q96RY7 1462 aa32.77■■■□□ 2.84
MVB12A-204ENST00000528515 FGD5Q6ZNL6 1462 aa32.74■■■□□ 2.83
MVB12A-204ENST00000528515 BIVM-ERCC5R4GMW8 1640 aa32.73■■■□□ 2.83
MVB12A-204ENST00000528515 WRNQ14191 1432 aaPredicted RBP eCLIP32.71■■■□□ 2.839e-6■■■■■ 50.1
MVB12A-204ENST00000528515 TARBP1Q13395 1621 aaKnown RBP32.7■■■□□ 2.83
MVB12A-204ENST00000528515 SYNJ1O43426 1573 aa32.69■■■□□ 2.82
MVB12A-204ENST00000528515 TOP2BQ02880 1626 aa32.69■■■□□ 2.82
MVB12A-204ENST00000528515 RAD54L2Q9Y4B4 1467 aa32.61■■■□□ 2.81
MVB12A-204ENST00000528515 SOGA1O94964 1423 aa32.61■■■□□ 2.81
MVB12A-204ENST00000528515 ZNF608Q9ULD9 1512 aaPredicted RBP32.61■■■□□ 2.81
MVB12A-204ENST00000528515 EIF4G3O43432 1585 aaKnown RBP32.58■■■□□ 2.81
MVB12A-204ENST00000528515 WDR97A6NE52 1622 aa32.57■■■□□ 2.8
MVB12A-204ENST00000528515 OSCARQ8IYS5 282 aa32.54■■■□□ 2.8
MVB12A-204ENST00000528515 AQRO60306 1485 aaKnown RBP eCLIP32.43■■■□□ 2.787e-8■■■■□ 23.6
MVB12A-204ENST00000528515 ABCA10Q8WWZ4 1543 aa32.41■■■□□ 2.78
MVB12A-204ENST00000528515 TDRD9Q8NDG6 1382 aaKnown RBP32.39■■■□□ 2.78
MVB12A-204ENST00000528515 PBRM1Q86U86 1689 aa32.37■■■□□ 2.77
MVB12A-204ENST00000528515 TRIM41Q8WV44 630 aa32.36■■■□□ 2.77
MVB12A-204ENST00000528515 ABCA5Q8WWZ7 1642 aa32.33■■■□□ 2.77
MVB12A-204ENST00000528515 GAPVD1Q14C86 1478 aa32.27■■■□□ 2.76
MVB12A-204ENST00000528515 GRIN2BQ13224 1484 aa32.23■■■□□ 2.75
MVB12A-204ENST00000528515 CHD1O14646 1710 aa32.22■■■□□ 2.75
MVB12A-204ENST00000528515 SNAPC4Q5SXM2 1469 aa32.18■■■□□ 2.74
MVB12A-204ENST00000528515 MAGI1Q96QZ7 1491 aaPredicted RBP32.13■■■□□ 2.73
MVB12A-204ENST00000528515 ERICH3Q5RHP9 1530 aa32.05■■■□□ 2.72
MVB12A-204ENST00000528515 FBLN2P98095 1184 aa32.02■■■□□ 2.72
MVB12A-204ENST00000528515 ADAMTS12P58397 1594 aa32.02■■■□□ 2.72
MVB12A-204ENST00000528515 KIF27Q86VH2 1401 aa32.01■■■□□ 2.72
MVB12A-204ENST00000528515 SYNJ2O15056 1496 aa32■■■□□ 2.71
MVB12A-204ENST00000528515 RIMBP3CA6NJZ7 1639 aa31.99■■■□□ 2.71
MVB12A-204ENST00000528515 RIMBP3BA6NNM3 1639 aa31.99■■■□□ 2.71
MVB12A-204ENST00000528515 RIMBP3Q9UFD9 1639 aa31.99■■■□□ 2.71
MVB12A-204ENST00000528515 CHMP7Q8WUX9 453 aaPredicted RBP31.94■■■□□ 2.7
MVB12A-204ENST00000528515 ARHGEF11O15085 1522 aa31.92■■■□□ 2.7
MVB12A-204ENST00000528515 CUL7Q14999 1698 aa31.89■■■□□ 2.7
MVB12A-204ENST00000528515 FHAD1B1AJZ9 1412 aa31.88■■■□□ 2.69
MVB12A-204ENST00000528515 GRIN2AQ12879 1464 aa31.83■■■□□ 2.69
MVB12A-204ENST00000528515 RUSC2Q8N2Y8 1516 aa31.79■■■□□ 2.68
MVB12A-204ENST00000528515 IGF1RP08069 1367 aa31.79■■■□□ 2.68
MVB12A-204ENST00000528515 CHIC1Q5VXU3 224 aa31.77■■■□□ 2.68
MVB12A-204ENST00000528515 CLASP1Q7Z460 1538 aa31.73■■■□□ 2.67
MVB12A-204ENST00000528515 CYB5RLQ6IPT4 315 aa31.72■■■□□ 2.67
MVB12A-204ENST00000528515 CEP170Q5SW79 1584 aa31.69■■■□□ 2.66
MVB12A-204ENST00000528515 CARMIL1Q5VZK9 1371 aa31.65■■■□□ 2.66
MVB12A-204ENST00000528515 NUP160Q12769 1436 aa31.64■■■□□ 2.66
MVB12A-204ENST00000528515 ARAP1Q96P48 1450 aa31.59■■■□□ 2.65
MVB12A-204ENST00000528515 EEA1Q15075 1411 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms