RNA–Protein interactions for RNA: ENST00000428390.2

FOXI3-201, Transcript of forkhead box I3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene FOXI3, Length 2,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXI3-201ENST00000428390 NISCHQ9Y2I1 1504 aa38.45■■■■□ 3.75
FOXI3-201ENST00000428390 SHROOM4Q9ULL8 1493 aa32.77■■■□□ 2.84
FOXI3-201ENST00000428390 CCDC180Q9P1Z9 1646 aa32.74■■■□□ 2.83
FOXI3-201ENST00000428390 ZCCHC6Q5VYS8 1495 aaKnown RBP32.46■■■□□ 2.79
FOXI3-201ENST00000428390 SUPT5HO00267 1087 aaKnown RBP32.21■■■□□ 2.75
FOXI3-201ENST00000428390 DCAF8L2P0C7V8 631 aa32.14■■■□□ 2.74
FOXI3-201ENST00000428390 DCAF1Q9Y4B6 1507 aa31.49■■■□□ 2.63
FOXI3-201ENST00000428390 CHIC1Q5VXU3 224 aa31.11■■■□□ 2.57
FOXI3-201ENST00000428390 MYO15BQ96JP2 1530 aa30.99■■■□□ 2.55
FOXI3-201ENST00000428390 SCRIBQ14160 1630 aa30.74■■■□□ 2.51
FOXI3-201ENST00000428390 ABCC9O60706 1549 aa30.67■■■□□ 2.5
FOXI3-201ENST00000428390 PCGF6Q9BYE7 350 aa30.49■■■□□ 2.47
FOXI3-201ENST00000428390 LOC105371045A0A1W2PR82 267 aa30.39■■■□□ 2.46
FOXI3-201ENST00000428390 RSF1Q96T23 1441 aaPredicted RBP30.37■■■□□ 2.45
FOXI3-201ENST00000428390 NACADO15069 1562 aa30.36■■■□□ 2.45
FOXI3-201ENST00000428390 HRCP23327 699 aa30.35■■■□□ 2.45
FOXI3-201ENST00000428390 CECR2Q9BXF3 1484 aa30.06■■■□□ 2.4
FOXI3-201ENST00000428390 RB1CC1Q8TDY2 1594 aa30.01■■■□□ 2.39
FOXI3-201ENST00000428390 PPARGC1BQ86YN6 1023 aaKnown RBP29.95■■■□□ 2.39
FOXI3-201ENST00000428390 MROH2BQ7Z745 1585 aa29.91■■■□□ 2.38
FOXI3-201ENST00000428390 TRIM41Q8WV44 630 aa29.86■■■□□ 2.37
FOXI3-201ENST00000428390 FAM9AQ8IZU1 332 aaPredicted RBP29.85■■■□□ 2.37
FOXI3-201ENST00000428390 EHMT2Q96KQ7 1210 aa29.79■■■□□ 2.36
FOXI3-201ENST00000428390 WIZO95785 1651 aa29.75■■■□□ 2.35
FOXI3-201ENST00000428390 TRIM26Q12899 539 aaPredicted RBP29.67■■■□□ 2.34
FOXI3-201ENST00000428390 BAZ1AQ9NRL2 1556 aaPredicted RBP29.54■■■□□ 2.32
FOXI3-201ENST00000428390 UNC13AQ9UPW8 1703 aa29.5■■■□□ 2.31
FOXI3-201ENST00000428390 PABPN1Q86U42 306 aaKnown RBP eCLIP29.34■■■□□ 2.29
FOXI3-201ENST00000428390 SMARCA4P51532 1647 aa29.33■■■□□ 2.29
FOXI3-201ENST00000428390 TOP2AP11388 1531 aaKnown RBP29.22■■■□□ 2.27
FOXI3-201ENST00000428390 EIF4G1Q04637 1599 aaKnown RBP29.16■■■□□ 2.26
FOXI3-201ENST00000428390 CCDC88BA6NC98 1476 aa29.15■■■□□ 2.26
FOXI3-201ENST00000428390 BICRAQ9NZM4 1560 aa29.14■■■□□ 2.25
FOXI3-201ENST00000428390 SMARCA2P51531 1590 aa29.08■■■□□ 2.25
FOXI3-201ENST00000428390 ABCC8Q09428 1581 aa29.02■■■□□ 2.24
FOXI3-201ENST00000428390 ZEB1P37275 1124 aaPredicted RBP29■■■□□ 2.23
FOXI3-201ENST00000428390 TTBK1Q5TCY1 1321 aaPredicted RBP28.83■■■□□ 2.21
FOXI3-201ENST00000428390 PEG3Q9GZU2 1588 aa28.74■■■□□ 2.19
FOXI3-201ENST00000428390 SOGA1O94964 1423 aa28.71■■■□□ 2.19
FOXI3-201ENST00000428390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.67■■■□□ 2.18
FOXI3-201ENST00000428390 ATAD2BQ9ULI0 1458 aa28.65■■■□□ 2.18
FOXI3-201ENST00000428390 CCER1Q8TC90 406 aaPredicted RBP28.59■■■□□ 2.17
FOXI3-201ENST00000428390 RUSC2Q8N2Y8 1516 aa28.59■■■□□ 2.17
FOXI3-201ENST00000428390 BAZ1BQ9UIG0 1483 aaKnown RBP28.57■■■□□ 2.16
FOXI3-201ENST00000428390 WRNQ14191 1432 aaPredicted RBP eCLIP28.54■■■□□ 2.16
FOXI3-201ENST00000428390 CSRNP3Q8WYN3 585 aa28.53■■■□□ 2.16
FOXI3-201ENST00000428390 UBTFP17480 764 aaKnown RBP28.51■■■□□ 2.16
FOXI3-201ENST00000428390 CEP162Q5TB80 1403 aa28.44■■■□□ 2.14
FOXI3-201ENST00000428390 EEA1Q15075 1411 aa28.43■■■□□ 2.14
FOXI3-201ENST00000428390 SYNJ1O43426 1573 aa28.39■■■□□ 2.14
FOXI3-201ENST00000428390 TNIKQ9UKE5 1360 aa28.39■■■□□ 2.13
FOXI3-201ENST00000428390 GOLGA3Q08378 1498 aa28.27■■■□□ 2.12
FOXI3-201ENST00000428390 RANGAP1P46060 587 aaPredicted RBP28.17■■■□□ 2.1
FOXI3-201ENST00000428390 CEP164Q9UPV0 1460 aa28.13■■■□□ 2.09
FOXI3-201ENST00000428390 NCAPD3P42695 1498 aa28.12■■■□□ 2.09
FOXI3-201ENST00000428390 SCAF1Q9H7N4 1312 aaKnown RBP28.12■■■□□ 2.09
FOXI3-201ENST00000428390 HMGXB3Q12766 1538 aa28.06■■■□□ 2.08
FOXI3-201ENST00000428390 KIF21BO75037 1637 aa28.05■■■□□ 2.08
FOXI3-201ENST00000428390 TOP2BQ02880 1626 aa28.04■■■□□ 2.08
FOXI3-201ENST00000428390 DIEXFQ68CQ4 756 aaKnown RBP28.01■■■□□ 2.07
FOXI3-201ENST00000428390 RAPGEF2Q9Y4G8 1499 aa28.01■■■□□ 2.07
FOXI3-201ENST00000428390 HNRNPUL2Q1KMD3 747 aaKnown RBP28■■■□□ 2.07
FOXI3-201ENST00000428390 CLIP1P30622 1438 aa27.97■■■□□ 2.07
FOXI3-201ENST00000428390 BIVM-ERCC5R4GMW8 1640 aa27.92■■■□□ 2.06
FOXI3-201ENST00000428390 APLP2Q06481 763 aa27.89■■■□□ 2.06
FOXI3-201ENST00000428390 CUX1P39880 1505 aa27.85■■■□□ 2.05
FOXI3-201ENST00000428390 CFTRP13569 1480 aa27.84■■■□□ 2.05
FOXI3-201ENST00000428390 NEUROD1Q13562 356 aa27.81■■■□□ 2.04
FOXI3-201ENST00000428390 VPS8Q8N3P4 1428 aa27.79■■■□□ 2.04
FOXI3-201ENST00000428390 ACIN1Q9UKV3 1341 aaKnown RBP27.78■■■□□ 2.04
FOXI3-201ENST00000428390 PRXQ9BXM0 1461 aa27.71■■■□□ 2.03
FOXI3-201ENST00000428390 ZNF316A6NFI3 1004 aaPredicted RBP27.7■■■□□ 2.03
FOXI3-201ENST00000428390 KIF27Q86VH2 1401 aa27.67■■■□□ 2.02
FOXI3-201ENST00000428390 CENPBP07199 599 aaPredicted RBP27.66■■■□□ 2.02
FOXI3-201ENST00000428390 ERICH3Q5RHP9 1530 aa27.65■■■□□ 2.02
FOXI3-201ENST00000428390 YTHDC1Q96MU7 727 aaKnown RBP27.6■■■□□ 2.01
FOXI3-201ENST00000428390 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
FOXI3-201ENST00000428390 GTF3C3Q9Y5Q9 886 aa27.58■■■□□ 2.01
FOXI3-201ENST00000428390 CC2D2AQ9P2K1 1620 aa27.56■■■□□ 2
FOXI3-201ENST00000428390 PRDM2Q13029 1718 aa27.54■■■□□ 2
FOXI3-201ENST00000428390 ARAP1Q96P48 1450 aa27.52■■■□□ 2
FOXI3-201ENST00000428390 CUX2O14529 1486 aa27.48■■□□□ 1.99
FOXI3-201ENST00000428390 PELP1Q8IZL8 1130 aaKnown RBP27.46■■□□□ 1.99
FOXI3-201ENST00000428390 KANK4Q5T7N3 995 aaPredicted RBP27.43■■□□□ 1.98
FOXI3-201ENST00000428390 IGF1RP08069 1367 aa27.41■■□□□ 1.98
FOXI3-201ENST00000428390 FGD5Q6ZNL6 1462 aa27.41■■□□□ 1.98
FOXI3-201ENST00000428390 MIER1Q8N108 512 aa27.4■■□□□ 1.98
FOXI3-201ENST00000428390 ARHGAP35Q9NRY4 1499 aa27.34■■□□□ 1.97
FOXI3-201ENST00000428390 FANCD2Q9BXW9 1451 aa27.33■■□□□ 1.97
FOXI3-201ENST00000428390 ITGAEP38570 1179 aa27.32■■□□□ 1.96
FOXI3-201ENST00000428390 CARMIL1Q5VZK9 1371 aa27.3■■□□□ 1.96
FOXI3-201ENST00000428390 NESP48681 1621 aa27.26■■□□□ 1.95
FOXI3-201ENST00000428390 RAD54L2Q9Y4B4 1467 aa27.19■■□□□ 1.94
FOXI3-201ENST00000428390 DHX57Q6P158 1386 aaKnown RBP27.17■■□□□ 1.94
FOXI3-201ENST00000428390 DNMBPQ6XZF7 1577 aa27.12■■□□□ 1.93
FOXI3-201ENST00000428390 TOPBP1Q92547 1522 aa27.12■■□□□ 1.93
FOXI3-201ENST00000428390 P3H3Q8IVL6 736 aa27.12■■□□□ 1.93
FOXI3-201ENST00000428390 POLA1P09884 1462 aaPredicted RBP27.11■■□□□ 1.93
FOXI3-201ENST00000428390 RRBP1Q9P2E9 1410 aaKnown RBP27.09■■□□□ 1.93
FOXI3-201ENST00000428390 ATP1B4Q9UN42 357 aaPredicted RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms