RNA–Protein interactions for RNA: ENST00000274150.4

NKD2-201, Transcript of naked cuticle homolog 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKD2, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKD2-201ENST00000274150 NISCHQ9Y2I1 1504 aa43.86■■■■■ 4.61
NKD2-201ENST00000274150 CCDC180Q9P1Z9 1646 aa38.33■■■■□ 3.73
NKD2-201ENST00000274150 ABCC9O60706 1549 aa36.86■■■■□ 3.49
NKD2-201ENST00000274150 ZCCHC6Q5VYS8 1495 aaKnown RBP36.72■■■■□ 3.47
NKD2-201ENST00000274150 DCAF8L2P0C7V8 631 aa36.67■■■■□ 3.46
NKD2-201ENST00000274150 DCAF1Q9Y4B6 1507 aa36.13■■■■□ 3.37
NKD2-201ENST00000274150 NACADO15069 1562 aa35.84■■■■□ 3.33
NKD2-201ENST00000274150 MYO15BQ96JP2 1530 aa35.83■■■■□ 3.33
NKD2-201ENST00000274150 SHROOM4Q9ULL8 1493 aa35.74■■■■□ 3.31
NKD2-201ENST00000274150 RB1CC1Q8TDY2 1594 aa35.67■■■■□ 3.3
NKD2-201ENST00000274150 SCRIBQ14160 1630 aa35.37■■■■□ 3.25
NKD2-201ENST00000274150 UNC13AQ9UPW8 1703 aa34.97■■■■□ 3.19
NKD2-201ENST00000274150 PABPN1Q86U42 306 aaKnown RBP eCLIP34.77■■■■□ 3.16
NKD2-201ENST00000274150 BICRAQ9NZM4 1560 aa34.63■■■■□ 3.13
NKD2-201ENST00000274150 CECR2Q9BXF3 1484 aa34.21■■■■□ 3.07
NKD2-201ENST00000274150 SUPT5HO00267 1087 aaKnown RBP34.18■■■■□ 3.06
NKD2-201ENST00000274150 MROH2BQ7Z745 1585 aa33.92■■■■□ 3.02
NKD2-201ENST00000274150 RSF1Q96T23 1441 aaPredicted RBP33.91■■■■□ 3.02
NKD2-201ENST00000274150 BAZ1AQ9NRL2 1556 aaPredicted RBP33.88■■■■□ 3.01
NKD2-201ENST00000274150 SMARCA4P51532 1647 aa33.79■■■■□ 3
NKD2-201ENST00000274150 WIZO95785 1651 aa33.64■■■□□ 2.98
NKD2-201ENST00000274150 EIF4G1Q04637 1599 aaKnown RBP33.63■■■□□ 2.97
NKD2-201ENST00000274150 ATAD2BQ9ULI0 1458 aa33.37■■■□□ 2.93
NKD2-201ENST00000274150 PEG3Q9GZU2 1588 aa33.32■■■□□ 2.92
NKD2-201ENST00000274150 SMARCA2P51531 1590 aa33.29■■■□□ 2.92
NKD2-201ENST00000274150 CC2D2AQ9P2K1 1620 aa33.27■■■□□ 2.92
NKD2-201ENST00000274150 TOP2AP11388 1531 aaKnown RBP33.18■■■□□ 2.9
NKD2-201ENST00000274150 BAZ1BQ9UIG0 1483 aaKnown RBP33.17■■■□□ 2.9
NKD2-201ENST00000274150 NCAPD3P42695 1498 aa33.12■■■□□ 2.89
NKD2-201ENST00000274150 HMGXB3Q12766 1538 aa32.98■■■□□ 2.87
NKD2-201ENST00000274150 DNAJC5BQ9UF47 199 aa32.96■■■□□ 2.87
NKD2-201ENST00000274150 CCDC88BA6NC98 1476 aa32.93■■■□□ 2.86
NKD2-201ENST00000274150 CHIC1Q5VXU3 224 aa32.39■■■□□ 2.78
NKD2-201ENST00000274150 CADPSQ9ULU8 1353 aa32.29■■■□□ 2.76
NKD2-201ENST00000274150 CFTRP13569 1480 aa32.28■■■□□ 2.76
NKD2-201ENST00000274150 NESP48681 1621 aa32.23■■■□□ 2.75
NKD2-201ENST00000274150 ABCC8Q09428 1581 aa32.15■■■□□ 2.74
NKD2-201ENST00000274150 TRIM41Q8WV44 630 aa32.1■■■□□ 2.73
NKD2-201ENST00000274150 LAMC3Q9Y6N6 1575 aa32.04■■■□□ 2.72
NKD2-201ENST00000274150 PRDM2Q13029 1718 aa32.01■■■□□ 2.72
NKD2-201ENST00000274150 FANCD2Q9BXW9 1451 aa31.94■■■□□ 2.7
NKD2-201ENST00000274150 WRNQ14191 1432 aaPredicted RBP eCLIP31.93■■■□□ 2.7
NKD2-201ENST00000274150 PDS5BQ9NTI5 1447 aa31.86■■■□□ 2.69
NKD2-201ENST00000274150 SYNJ1O43426 1573 aa31.82■■■□□ 2.68
NKD2-201ENST00000274150 KIF21AQ7Z4S6 1674 aa31.77■■■□□ 2.68
NKD2-201ENST00000274150 CEP164Q9UPV0 1460 aa31.76■■■□□ 2.68
NKD2-201ENST00000274150 CUX1P39880 1505 aa31.73■■■□□ 2.67
NKD2-201ENST00000274150 TOP2BQ02880 1626 aa31.66■■■□□ 2.66
NKD2-201ENST00000274150 ERCC6Q03468 1493 aa31.62■■■□□ 2.65
NKD2-201ENST00000274150 FAM9AQ8IZU1 332 aaPredicted RBP31.61■■■□□ 2.65
NKD2-201ENST00000274150 BIVM-ERCC5R4GMW8 1640 aa31.61■■■□□ 2.65
NKD2-201ENST00000274150 URB2Q14146 1524 aaKnown RBP31.57■■■□□ 2.64
NKD2-201ENST00000274150 TOPBP1Q92547 1522 aa31.53■■■□□ 2.64
NKD2-201ENST00000274150 DNMBPQ6XZF7 1577 aa31.52■■■□□ 2.64
NKD2-201ENST00000274150 SOGA1O94964 1423 aa31.47■■■□□ 2.63
NKD2-201ENST00000274150 FGD5Q6ZNL6 1462 aa31.46■■■□□ 2.63
NKD2-201ENST00000274150 MRC2Q9UBG0 1479 aa31.45■■■□□ 2.63
NKD2-201ENST00000274150 RUSC2Q8N2Y8 1516 aa31.4■■■□□ 2.62
NKD2-201ENST00000274150 POLA1P09884 1462 aaPredicted RBP31.36■■■□□ 2.61
NKD2-201ENST00000274150 RAD54L2Q9Y4B4 1467 aa31.33■■■□□ 2.61
NKD2-201ENST00000274150 EHMT2Q96KQ7 1210 aa31.3■■■□□ 2.6
NKD2-201ENST00000274150 THOC2Q8NI27 1593 aaKnown RBP31.29■■■□□ 2.6
NKD2-201ENST00000274150 WDR62O43379 1518 aa31.28■■■□□ 2.6
NKD2-201ENST00000274150 LOC105371045A0A1W2PR82 267 aa31.26■■■□□ 2.6
NKD2-201ENST00000274150 CUX2O14529 1486 aa31.2■■■□□ 2.58
NKD2-201ENST00000274150 CSRNP3Q8WYN3 585 aa31.18■■■□□ 2.58
NKD2-201ENST00000274150 EEA1Q15075 1411 aa31.14■■■□□ 2.58
NKD2-201ENST00000274150 KIF27Q86VH2 1401 aa31.14■■■□□ 2.58
NKD2-201ENST00000274150 ABCA10Q8WWZ4 1543 aa31.11■■■□□ 2.57
NKD2-201ENST00000274150 TDRD9Q8NDG6 1382 aaKnown RBP31.09■■■□□ 2.57
NKD2-201ENST00000274150 TARBP1Q13395 1621 aaKnown RBP31.07■■■□□ 2.56
NKD2-201ENST00000274150 WDR97A6NE52 1622 aa31.01■■■□□ 2.56
NKD2-201ENST00000274150 IFT140Q96RY7 1462 aa31■■■□□ 2.55
NKD2-201ENST00000274150 ZNF608Q9ULD9 1512 aaPredicted RBP30.96■■■□□ 2.55
NKD2-201ENST00000274150 AQRO60306 1485 aaKnown RBP eCLIP30.95■■■□□ 2.55
NKD2-201ENST00000274150 IGF1RP08069 1367 aa30.95■■■□□ 2.54
NKD2-201ENST00000274150 GAPVD1Q14C86 1478 aa30.91■■■□□ 2.54
NKD2-201ENST00000274150 ABCA5Q8WWZ7 1642 aa30.88■■■□□ 2.53
NKD2-201ENST00000274150 UBTFP17480 764 aaKnown RBP30.83■■■□□ 2.53
NKD2-201ENST00000274150 RAPGEF2Q9Y4G8 1499 aa30.82■■■□□ 2.52
NKD2-201ENST00000274150 PRXQ9BXM0 1461 aa30.8■■■□□ 2.52
NKD2-201ENST00000274150 CARMIL1Q5VZK9 1371 aa30.79■■■□□ 2.52
NKD2-201ENST00000274150 KIF21BO75037 1637 aa30.78■■■□□ 2.52
NKD2-201ENST00000274150 GOLGA3Q08378 1498 aa30.77■■■□□ 2.52
NKD2-201ENST00000274150 EIF4G3O43432 1585 aaKnown RBP30.77■■■□□ 2.52
NKD2-201ENST00000274150 PBRM1Q86U86 1689 aa30.72■■■□□ 2.51
NKD2-201ENST00000274150 ERICH3Q5RHP9 1530 aa30.72■■■□□ 2.51
NKD2-201ENST00000274150 GRIN2BQ13224 1484 aa30.7■■■□□ 2.5
NKD2-201ENST00000274150 CUL7Q14999 1698 aa30.64■■■□□ 2.5
NKD2-201ENST00000274150 RANGAP1P46060 587 aaPredicted RBP30.6■■■□□ 2.49
NKD2-201ENST00000274150 SNAPC4Q5SXM2 1469 aa30.6■■■□□ 2.49
NKD2-201ENST00000274150 TNIKQ9UKE5 1360 aa30.59■■■□□ 2.49
NKD2-201ENST00000274150 FHAD1B1AJZ9 1412 aa30.53■■■□□ 2.48
NKD2-201ENST00000274150 ADAMTS12P58397 1594 aa30.52■■■□□ 2.48
NKD2-201ENST00000274150 FBLN2P98095 1184 aa30.51■■■□□ 2.48
NKD2-201ENST00000274150 CEP162Q5TB80 1403 aa30.45■■■□□ 2.47
NKD2-201ENST00000274150 CHMP7Q8WUX9 453 aaPredicted RBP30.45■■■□□ 2.47
NKD2-201ENST00000274150 MAGI1Q96QZ7 1491 aaPredicted RBP30.45■■■□□ 2.47
NKD2-201ENST00000274150 SYNJ2O15056 1496 aa30.37■■■□□ 2.45
NKD2-201ENST00000274150 GRIN2AQ12879 1464 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms