RNA–Protein interactions for RNA: ENST00000530356.5

SNX19-209, Transcript of sorting nexin 19, humanhuman

TSL 2 BASIC

Gene SNX19, Length 1,562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-209ENST00000530356 NISCHQ9Y2I1 1504 aa43.03■■■■■ 4.48
SNX19-209ENST00000530356 CCDC180Q9P1Z9 1646 aa37.51■■■■□ 3.59
SNX19-209ENST00000530356 ZCCHC6Q5VYS8 1495 aaKnown RBP36.22■■■■□ 3.39
SNX19-209ENST00000530356 DCAF1Q9Y4B6 1507 aa35.69■■■■□ 3.3
SNX19-209ENST00000530356 MYO15BQ96JP2 1530 aa35.19■■■■□ 3.22
SNX19-209ENST00000530356 DCAF8L2P0C7V8 631 aa35.18■■■■□ 3.22
SNX19-209ENST00000530356 SHROOM4Q9ULL8 1493 aa35.05■■■■□ 3.2
SNX19-209ENST00000530356 ABCC9O60706 1549 aa35■■■■□ 3.19
SNX19-209ENST00000530356 NACADO15069 1562 aa34.82■■■■□ 3.17
SNX19-209ENST00000530356 RB1CC1Q8TDY2 1594 aa34.44■■■■□ 3.1
SNX19-209ENST00000530356 SCRIBQ14160 1630 aa34.36■■■■□ 3.09
SNX19-209ENST00000530356 SUPT5HO00267 1087 aaKnown RBP33.87■■■■□ 3.01
SNX19-209ENST00000530356 UNC13AQ9UPW8 1703 aa33.75■■■□□ 2.99
SNX19-209ENST00000530356 RSF1Q96T23 1441 aaPredicted RBP33.43■■■□□ 2.94
SNX19-209ENST00000530356 BICRAQ9NZM4 1560 aa33.36■■■□□ 2.93
SNX19-209ENST00000530356 CECR2Q9BXF3 1484 aa33.32■■■□□ 2.92
SNX19-209ENST00000530356 BAZ1AQ9NRL2 1556 aaPredicted RBP33.23■■■□□ 2.91
SNX19-209ENST00000530356 MROH2BQ7Z745 1585 aa33.2■■■□□ 2.91
SNX19-209ENST00000530356 SMARCA4P51532 1647 aa33.03■■■□□ 2.88
SNX19-209ENST00000530356 PABPN1Q86U42 306 aaKnown RBP eCLIP32.98■■■□□ 2.87
SNX19-209ENST00000530356 WIZO95785 1651 aa32.95■■■□□ 2.87
SNX19-209ENST00000530356 PEG3Q9GZU2 1588 aa32.69■■■□□ 2.82
SNX19-209ENST00000530356 TOP2AP11388 1531 aaKnown RBP32.68■■■□□ 2.82
SNX19-209ENST00000530356 CHIC1Q5VXU3 224 aa32.66■■■□□ 2.82
SNX19-209ENST00000530356 SMARCA2P51531 1590 aa32.44■■■□□ 2.78
SNX19-209ENST00000530356 ATAD2BQ9ULI0 1458 aa32.38■■■□□ 2.77
SNX19-209ENST00000530356 EIF4G1Q04637 1599 aaKnown RBP32.32■■■□□ 2.76
SNX19-209ENST00000530356 CCDC88BA6NC98 1476 aa32.29■■■□□ 2.76
SNX19-209ENST00000530356 BAZ1BQ9UIG0 1483 aaKnown RBP32.22■■■□□ 2.75
SNX19-209ENST00000530356 HMGXB3Q12766 1538 aa32.13■■■□□ 2.73
SNX19-209ENST00000530356 NCAPD3P42695 1498 aa32.1■■■□□ 2.73
SNX19-209ENST00000530356 TRIM41Q8WV44 630 aa31.9■■■□□ 2.7
SNX19-209ENST00000530356 CC2D2AQ9P2K1 1620 aa31.76■■■□□ 2.67
SNX19-209ENST00000530356 ABCC8Q09428 1581 aa31.65■■■□□ 2.66
SNX19-209ENST00000530356 WRNQ14191 1432 aaPredicted RBP eCLIP31.47■■■□□ 2.63
SNX19-209ENST00000530356 CFTRP13569 1480 aa31.45■■■□□ 2.63
SNX19-209ENST00000530356 PRDM2Q13029 1718 aa31.41■■■□□ 2.62
SNX19-209ENST00000530356 SYNJ1O43426 1573 aa31.32■■■□□ 2.61
SNX19-209ENST00000530356 LOC105371045A0A1W2PR82 267 aa31.31■■■□□ 2.6
SNX19-209ENST00000530356 EEA1Q15075 1411 aa31.26■■■□□ 2.59
SNX19-209ENST00000530356 CADPSQ9ULU8 1353 aa31.26■■■□□ 2.59
SNX19-209ENST00000530356 TOP2BQ02880 1626 aa31.24■■■□□ 2.59
SNX19-209ENST00000530356 BIVM-ERCC5R4GMW8 1640 aa31.24■■■□□ 2.59
SNX19-209ENST00000530356 FAM9AQ8IZU1 332 aaPredicted RBP31.21■■■□□ 2.59
SNX19-209ENST00000530356 SOGA1O94964 1423 aa31.09■■■□□ 2.57
SNX19-209ENST00000530356 CUX1P39880 1505 aa31.04■■■□□ 2.56
SNX19-209ENST00000530356 LAMC3Q9Y6N6 1575 aa31■■■□□ 2.55
SNX19-209ENST00000530356 RUSC2Q8N2Y8 1516 aa30.95■■■□□ 2.55
SNX19-209ENST00000530356 CSRNP3Q8WYN3 585 aa30.92■■■□□ 2.54
SNX19-209ENST00000530356 FANCD2Q9BXW9 1451 aa30.9■■■□□ 2.54
SNX19-209ENST00000530356 KIF21BO75037 1637 aa30.82■■■□□ 2.53
SNX19-209ENST00000530356 NESP48681 1621 aa30.82■■■□□ 2.52
SNX19-209ENST00000530356 GOLGA3Q08378 1498 aa30.77■■■□□ 2.52
SNX19-209ENST00000530356 CEP164Q9UPV0 1460 aa30.76■■■□□ 2.51
SNX19-209ENST00000530356 DNMBPQ6XZF7 1577 aa30.73■■■□□ 2.51
SNX19-209ENST00000530356 TNIKQ9UKE5 1360 aa30.72■■■□□ 2.51
SNX19-209ENST00000530356 PDS5BQ9NTI5 1447 aa30.7■■■□□ 2.5
SNX19-209ENST00000530356 DNAJC5BQ9UF47 199 aa30.69■■■□□ 2.5
SNX19-209ENST00000530356 KIF27Q86VH2 1401 aa30.67■■■□□ 2.5
SNX19-209ENST00000530356 EHMT2Q96KQ7 1210 aa30.66■■■□□ 2.5
SNX19-209ENST00000530356 FGD5Q6ZNL6 1462 aa30.65■■■□□ 2.5
SNX19-209ENST00000530356 TOPBP1Q92547 1522 aa30.62■■■□□ 2.49
SNX19-209ENST00000530356 ERICH3Q5RHP9 1530 aa30.58■■■□□ 2.49
SNX19-209ENST00000530356 PRXQ9BXM0 1461 aa30.54■■■□□ 2.48
SNX19-209ENST00000530356 CEP162Q5TB80 1403 aa30.54■■■□□ 2.48
SNX19-209ENST00000530356 KIF21AQ7Z4S6 1674 aa30.53■■■□□ 2.48
SNX19-209ENST00000530356 URB2Q14146 1524 aaKnown RBP30.5■■■□□ 2.47
SNX19-209ENST00000530356 CUX2O14529 1486 aa30.48■■■□□ 2.47
SNX19-209ENST00000530356 RAPGEF2Q9Y4G8 1499 aa30.48■■■□□ 2.47
SNX19-209ENST00000530356 UBTFP17480 764 aaKnown RBP30.48■■■□□ 2.47
SNX19-209ENST00000530356 POLA1P09884 1462 aaPredicted RBP30.47■■■□□ 2.47
SNX19-209ENST00000530356 ABCA10Q8WWZ4 1543 aa30.45■■■□□ 2.47
SNX19-209ENST00000530356 WDR97A6NE52 1622 aa30.36■■■□□ 2.45
SNX19-209ENST00000530356 IGF1RP08069 1367 aa30.33■■■□□ 2.45
SNX19-209ENST00000530356 RAD54L2Q9Y4B4 1467 aa30.31■■■□□ 2.44
SNX19-209ENST00000530356 MRC2Q9UBG0 1479 aa30.29■■■□□ 2.44
SNX19-209ENST00000530356 CLIP1P30622 1438 aa30.24■■■□□ 2.43
SNX19-209ENST00000530356 TRIM26Q12899 539 aaPredicted RBP30.23■■■□□ 2.43
SNX19-209ENST00000530356 ABCA5Q8WWZ7 1642 aa30.19■■■□□ 2.42
SNX19-209ENST00000530356 CUL7Q14999 1698 aa30.19■■■□□ 2.42
SNX19-209ENST00000530356 CARMIL1Q5VZK9 1371 aa30.18■■■□□ 2.42
SNX19-209ENST00000530356 TARBP1Q13395 1621 aaKnown RBP30.17■■■□□ 2.42
SNX19-209ENST00000530356 PCGF6Q9BYE7 350 aa30.16■■■□□ 2.42
SNX19-209ENST00000530356 WDR62O43379 1518 aa30.15■■■□□ 2.42
SNX19-209ENST00000530356 VPS8Q8N3P4 1428 aa30.05■■■□□ 2.4
SNX19-209ENST00000530356 GAPVD1Q14C86 1478 aa30.05■■■□□ 2.4
SNX19-209ENST00000530356 ERCC6Q03468 1493 aa30.01■■■□□ 2.39
SNX19-209ENST00000530356 THOC2Q8NI27 1593 aaKnown RBP29.99■■■□□ 2.39
SNX19-209ENST00000530356 IFT140Q96RY7 1462 aa29.98■■■□□ 2.39
SNX19-209ENST00000530356 TDRD9Q8NDG6 1382 aaKnown RBP29.97■■■□□ 2.39
SNX19-209ENST00000530356 ARAP1Q96P48 1450 aa29.93■■■□□ 2.38
SNX19-209ENST00000530356 PBRM1Q86U86 1689 aa29.92■■■□□ 2.38
SNX19-209ENST00000530356 CTTNBP2Q8WZ74 1663 aa29.87■■■□□ 2.37
SNX19-209ENST00000530356 ARHGAP35Q9NRY4 1499 aa29.87■■■□□ 2.37
SNX19-209ENST00000530356 GRIN2BQ13224 1484 aa29.8■■■□□ 2.36
SNX19-209ENST00000530356 RANGAP1P46060 587 aaPredicted RBP29.77■■■□□ 2.36
SNX19-209ENST00000530356 ADAMTS12P58397 1594 aa29.77■■■□□ 2.36
SNX19-209ENST00000530356 FHAD1B1AJZ9 1412 aa29.76■■■□□ 2.35
SNX19-209ENST00000530356 AQRO60306 1485 aaKnown RBP eCLIP29.76■■■□□ 2.35
SNX19-209ENST00000530356 EFCAB5A4FU69 1503 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms