RNA–Protein interactions for RNA: ENST00000441090.6

LRCH3-207, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2 BASIC

Gene LRCH3, Length 2,034 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-207ENST00000441090 NISCHQ9Y2I1 1504 aa40.29■■■■■ 4.04
LRCH3-207ENST00000441090 CCDC180Q9P1Z9 1646 aa34.65■■■■□ 3.14
LRCH3-207ENST00000441090 ZCCHC6Q5VYS8 1495 aaKnown RBP34.04■■■■□ 3.04
LRCH3-207ENST00000441090 SHROOM4Q9ULL8 1493 aa33.69■■■□□ 2.98
LRCH3-207ENST00000441090 DCAF1Q9Y4B6 1507 aa33.24■■■□□ 2.91
LRCH3-207ENST00000441090 DCAF8L2P0C7V8 631 aa33.06■■■□□ 2.88
LRCH3-207ENST00000441090 SUPT5HO00267 1087 aaKnown RBP32.87■■■□□ 2.85
LRCH3-207ENST00000441090 MYO15BQ96JP2 1530 aa32.45■■■□□ 2.79
LRCH3-207ENST00000441090 SCRIBQ14160 1630 aa32.12■■■□□ 2.73
LRCH3-207ENST00000441090 ABCC9O60706 1549 aa32.08■■■□□ 2.73
LRCH3-207ENST00000441090 NACADO15069 1562 aa32.02■■■□□ 2.72
LRCH3-207ENST00000441090 CHIC1Q5VXU3 224 aa31.93■■■□□ 2.7
LRCH3-207ENST00000441090 RSF1Q96T23 1441 aaPredicted RBP31.65■■■□□ 2.66
LRCH3-207ENST00000441090 RB1CC1Q8TDY2 1594 aa31.54■■■□□ 2.64
LRCH3-207ENST00000441090 CECR2Q9BXF3 1484 aa31.31■■■□□ 2.6
LRCH3-207ENST00000441090 MROH2BQ7Z745 1585 aa31.22■■■□□ 2.59
LRCH3-207ENST00000441090 UNC13AQ9UPW8 1703 aa31.12■■■□□ 2.57
LRCH3-207ENST00000441090 WIZO95785 1651 aa31.07■■■□□ 2.56
LRCH3-207ENST00000441090 BAZ1AQ9NRL2 1556 aaPredicted RBP31.02■■■□□ 2.56
LRCH3-207ENST00000441090 LOC105371045A0A1W2PR82 267 aa30.82■■■□□ 2.52
LRCH3-207ENST00000441090 SMARCA4P51532 1647 aa30.8■■■□□ 2.52
LRCH3-207ENST00000441090 TRIM41Q8WV44 630 aa30.77■■■□□ 2.52
LRCH3-207ENST00000441090 TOP2AP11388 1531 aaKnown RBP30.67■■■□□ 2.5
LRCH3-207ENST00000441090 BICRAQ9NZM4 1560 aa30.65■■■□□ 2.5
LRCH3-207ENST00000441090 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
LRCH3-207ENST00000441090 SMARCA2P51531 1590 aa30.45■■■□□ 2.47
LRCH3-207ENST00000441090 PCGF6Q9BYE7 350 aa30.44■■■□□ 2.46
LRCH3-207ENST00000441090 CCDC88BA6NC98 1476 aa30.41■■■□□ 2.46
LRCH3-207ENST00000441090 PABPN1Q86U42 306 aaKnown RBP eCLIP30.39■■■□□ 2.46
LRCH3-207ENST00000441090 FAM9AQ8IZU1 332 aaPredicted RBP30.33■■■□□ 2.45
LRCH3-207ENST00000441090 PEG3Q9GZU2 1588 aa30.33■■■□□ 2.45
LRCH3-207ENST00000441090 HRCP23327 699 aa30.32■■■□□ 2.44
LRCH3-207ENST00000441090 ABCC8Q09428 1581 aa30.16■■■□□ 2.42
LRCH3-207ENST00000441090 TRIM26Q12899 539 aaPredicted RBP30.11■■■□□ 2.41
LRCH3-207ENST00000441090 ATAD2BQ9ULI0 1458 aa30.02■■■□□ 2.4
LRCH3-207ENST00000441090 EHMT2Q96KQ7 1210 aa29.93■■■□□ 2.38
LRCH3-207ENST00000441090 BAZ1BQ9UIG0 1483 aaKnown RBP29.91■■■□□ 2.38
LRCH3-207ENST00000441090 EEA1Q15075 1411 aa29.77■■■□□ 2.36
LRCH3-207ENST00000441090 SOGA1O94964 1423 aa29.76■■■□□ 2.35
LRCH3-207ENST00000441090 WRNQ14191 1432 aaPredicted RBP eCLIP29.75■■■□□ 2.35
LRCH3-207ENST00000441090 SYNJ1O43426 1573 aa29.66■■■□□ 2.34
LRCH3-207ENST00000441090 RUSC2Q8N2Y8 1516 aa29.63■■■□□ 2.33
LRCH3-207ENST00000441090 HMGXB3Q12766 1538 aa29.61■■■□□ 2.33
LRCH3-207ENST00000441090 CSRNP3Q8WYN3 585 aa29.58■■■□□ 2.33
LRCH3-207ENST00000441090 PPARGC1BQ86YN6 1023 aaKnown RBP29.55■■■□□ 2.32
LRCH3-207ENST00000441090 TNIKQ9UKE5 1360 aa29.55■■■□□ 2.32
LRCH3-207ENST00000441090 NCAPD3P42695 1498 aa29.55■■■□□ 2.32
LRCH3-207ENST00000441090 CEP162Q5TB80 1403 aa29.51■■■□□ 2.31
LRCH3-207ENST00000441090 GOLGA3Q08378 1498 aa29.47■■■□□ 2.31
LRCH3-207ENST00000441090 TOP2BQ02880 1626 aa29.41■■■□□ 2.3
LRCH3-207ENST00000441090 KIF21BO75037 1637 aa29.41■■■□□ 2.3
LRCH3-207ENST00000441090 BIVM-ERCC5R4GMW8 1640 aa29.37■■■□□ 2.29
LRCH3-207ENST00000441090 ZEB1P37275 1124 aaPredicted RBP29.36■■■□□ 2.29
LRCH3-207ENST00000441090 CEP164Q9UPV0 1460 aa29.36■■■□□ 2.29
LRCH3-207ENST00000441090 UBTFP17480 764 aaKnown RBP29.32■■■□□ 2.28
LRCH3-207ENST00000441090 CFTRP13569 1480 aa29.2■■■□□ 2.26
LRCH3-207ENST00000441090 PRDM2Q13029 1718 aa29.18■■■□□ 2.26
LRCH3-207ENST00000441090 CUX1P39880 1505 aa29.12■■■□□ 2.25
LRCH3-207ENST00000441090 RAPGEF2Q9Y4G8 1499 aa29.1■■■□□ 2.25
LRCH3-207ENST00000441090 CLIP1P30622 1438 aa29.05■■■□□ 2.24
LRCH3-207ENST00000441090 ERICH3Q5RHP9 1530 aa29.01■■■□□ 2.23
LRCH3-207ENST00000441090 CC2D2AQ9P2K1 1620 aa28.97■■■□□ 2.23
LRCH3-207ENST00000441090 PRXQ9BXM0 1461 aa28.96■■■□□ 2.23
LRCH3-207ENST00000441090 VPS8Q8N3P4 1428 aa28.93■■■□□ 2.22
LRCH3-207ENST00000441090 TTBK1Q5TCY1 1321 aaPredicted RBP28.91■■■□□ 2.22
LRCH3-207ENST00000441090 KIF27Q86VH2 1401 aa28.89■■■□□ 2.22
LRCH3-207ENST00000441090 CADPSQ9ULU8 1353 aa28.89■■■□□ 2.22
LRCH3-207ENST00000441090 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.84■■■□□ 2.21
LRCH3-207ENST00000441090 CCER1Q8TC90 406 aaPredicted RBP28.79■■■□□ 2.2
LRCH3-207ENST00000441090 ARAP1Q96P48 1450 aa28.67■■■□□ 2.18
LRCH3-207ENST00000441090 RANGAP1P46060 587 aaPredicted RBP28.64■■■□□ 2.18
LRCH3-207ENST00000441090 FGD5Q6ZNL6 1462 aa28.64■■■□□ 2.18
LRCH3-207ENST00000441090 APLP2Q06481 763 aa28.64■■■□□ 2.17
LRCH3-207ENST00000441090 CUX2O14529 1486 aa28.63■■■□□ 2.17
LRCH3-207ENST00000441090 FANCD2Q9BXW9 1451 aa28.61■■■□□ 2.17
LRCH3-207ENST00000441090 IGF1RP08069 1367 aa28.55■■■□□ 2.16
LRCH3-207ENST00000441090 DNMBPQ6XZF7 1577 aa28.52■■■□□ 2.16
LRCH3-207ENST00000441090 ARHGAP35Q9NRY4 1499 aa28.48■■■□□ 2.15
LRCH3-207ENST00000441090 NESP48681 1621 aa28.43■■■□□ 2.14
LRCH3-207ENST00000441090 CARMIL1Q5VZK9 1371 aa28.43■■■□□ 2.14
LRCH3-207ENST00000441090 LAMC3Q9Y6N6 1575 aa28.41■■■□□ 2.14
LRCH3-207ENST00000441090 TOPBP1Q92547 1522 aa28.41■■■□□ 2.14
LRCH3-207ENST00000441090 HNRNPUL2Q1KMD3 747 aaKnown RBP28.39■■■□□ 2.14
LRCH3-207ENST00000441090 ABCA10Q8WWZ4 1543 aa28.37■■■□□ 2.13
LRCH3-207ENST00000441090 POLA1P09884 1462 aaPredicted RBP28.36■■■□□ 2.13
LRCH3-207ENST00000441090 RAD54L2Q9Y4B4 1467 aa28.31■■■□□ 2.12
LRCH3-207ENST00000441090 KANK4Q5T7N3 995 aaPredicted RBP28.3■■■□□ 2.12
LRCH3-207ENST00000441090 WDR97A6NE52 1622 aa28.25■■■□□ 2.11
LRCH3-207ENST00000441090 CUL7Q14999 1698 aa28.25■■■□□ 2.11
LRCH3-207ENST00000441090 RRBP1Q9P2E9 1410 aaKnown RBP28.22■■■□□ 2.11
LRCH3-207ENST00000441090 URB2Q14146 1524 aaKnown RBP28.22■■■□□ 2.11
LRCH3-207ENST00000441090 MAP3K1Q13233 1512 aa28.21■■■□□ 2.11
LRCH3-207ENST00000441090 TIAM1Q13009 1591 aa28.17■■■□□ 2.1
LRCH3-207ENST00000441090 CTTNBP2Q8WZ74 1663 aa28.14■■■□□ 2.1
LRCH3-207ENST00000441090 PDS5BQ9NTI5 1447 aa28.14■■■□□ 2.1
LRCH3-207ENST00000441090 KIF21AQ7Z4S6 1674 aa28.1■■■□□ 2.09
LRCH3-207ENST00000441090 ABCA5Q8WWZ7 1642 aa28.1■■■□□ 2.09
LRCH3-207ENST00000441090 FHAD1B1AJZ9 1412 aa28.09■■■□□ 2.09
LRCH3-207ENST00000441090 EFCAB5A4FU69 1503 aa28.07■■■□□ 2.08
LRCH3-207ENST00000441090 CFAP43Q8NDM7 1665 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms