RNA–Protein interactions for RNA: ENST00000540636.5

GBGT1-208, Transcript of globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group), humanhuman

TSL 2 BASIC

Gene GBGT1, Length 1,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBGT1-208ENST00000540636 NISCHQ9Y2I1 1504 aa39.47■■■■□ 3.91
GBGT1-208ENST00000540636 CCDC180Q9P1Z9 1646 aa33.87■■■■□ 3.01
GBGT1-208ENST00000540636 ZCCHC6Q5VYS8 1495 aaKnown RBP33.36■■■□□ 2.93
GBGT1-208ENST00000540636 SHROOM4Q9ULL8 1493 aa33■■■□□ 2.87
GBGT1-208ENST00000540636 DCAF1Q9Y4B6 1507 aa32.62■■■□□ 2.81
GBGT1-208ENST00000540636 DCAF8L2P0C7V8 631 aa32.36■■■□□ 2.77
GBGT1-208ENST00000540636 SUPT5HO00267 1087 aaKnown RBP32.31■■■□□ 2.76
GBGT1-208ENST00000540636 MYO15BQ96JP2 1530 aa31.84■■■□□ 2.69
GBGT1-208ENST00000540636 CHIC1Q5VXU3 224 aa31.47■■■□□ 2.63
GBGT1-208ENST00000540636 ABCC9O60706 1549 aa31.41■■■□□ 2.62
GBGT1-208ENST00000540636 SCRIBQ14160 1630 aa31.34■■■□□ 2.61
GBGT1-208ENST00000540636 NACADO15069 1562 aa31.33■■■□□ 2.61
GBGT1-208ENST00000540636 RSF1Q96T23 1441 aaPredicted RBP31.05■■■□□ 2.56
GBGT1-208ENST00000540636 RB1CC1Q8TDY2 1594 aa30.81■■■□□ 2.52
GBGT1-208ENST00000540636 CECR2Q9BXF3 1484 aa30.59■■■□□ 2.49
GBGT1-208ENST00000540636 MROH2BQ7Z745 1585 aa30.54■■■□□ 2.48
GBGT1-208ENST00000540636 BAZ1AQ9NRL2 1556 aaPredicted RBP30.39■■■□□ 2.46
GBGT1-208ENST00000540636 WIZO95785 1651 aa30.35■■■□□ 2.45
GBGT1-208ENST00000540636 LOC105371045A0A1W2PR82 267 aa30.32■■■□□ 2.44
GBGT1-208ENST00000540636 TRIM41Q8WV44 630 aa30.3■■■□□ 2.44
GBGT1-208ENST00000540636 UNC13AQ9UPW8 1703 aa30.23■■■□□ 2.43
GBGT1-208ENST00000540636 SMARCA4P51532 1647 aa30.11■■■□□ 2.41
GBGT1-208ENST00000540636 HRCP23327 699 aa30.09■■■□□ 2.41
GBGT1-208ENST00000540636 PCGF6Q9BYE7 350 aa30.08■■■□□ 2.41
GBGT1-208ENST00000540636 TOP2AP11388 1531 aaKnown RBP30.04■■■□□ 2.4
GBGT1-208ENST00000540636 EIF4G1Q04637 1599 aaKnown RBP29.96■■■□□ 2.39
GBGT1-208ENST00000540636 BICRAQ9NZM4 1560 aa29.86■■■□□ 2.37
GBGT1-208ENST00000540636 TRIM26Q12899 539 aaPredicted RBP29.83■■■□□ 2.37
GBGT1-208ENST00000540636 SMARCA2P51531 1590 aa29.8■■■□□ 2.36
GBGT1-208ENST00000540636 CCDC88BA6NC98 1476 aa29.78■■■□□ 2.36
GBGT1-208ENST00000540636 FAM9AQ8IZU1 332 aaPredicted RBP29.78■■■□□ 2.36
GBGT1-208ENST00000540636 PEG3Q9GZU2 1588 aa29.68■■■□□ 2.34
GBGT1-208ENST00000540636 PABPN1Q86U42 306 aaKnown RBP eCLIP29.63■■■□□ 2.33
GBGT1-208ENST00000540636 ABCC8Q09428 1581 aa29.49■■■□□ 2.31
GBGT1-208ENST00000540636 ATAD2BQ9ULI0 1458 aa29.37■■■□□ 2.29
GBGT1-208ENST00000540636 EEA1Q15075 1411 aa29.36■■■□□ 2.29
GBGT1-208ENST00000540636 EHMT2Q96KQ7 1210 aa29.32■■■□□ 2.28
GBGT1-208ENST00000540636 BAZ1BQ9UIG0 1483 aaKnown RBP29.27■■■□□ 2.28
GBGT1-208ENST00000540636 ZEB1P37275 1124 aaPredicted RBP29.23■■■□□ 2.27
GBGT1-208ENST00000540636 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.269e-6■■■■■ 50.1
GBGT1-208ENST00000540636 SOGA1O94964 1423 aa29.18■■■□□ 2.26
GBGT1-208ENST00000540636 PPARGC1BQ86YN6 1023 aaKnown RBP29.18■■■□□ 2.26
GBGT1-208ENST00000540636 TNIKQ9UKE5 1360 aa29.12■■■□□ 2.25
GBGT1-208ENST00000540636 CSRNP3Q8WYN3 585 aa29.12■■■□□ 2.25
GBGT1-208ENST00000540636 CEP162Q5TB80 1403 aa29.03■■■□□ 2.24
GBGT1-208ENST00000540636 SYNJ1O43426 1573 aa29■■■□□ 2.23
GBGT1-208ENST00000540636 RUSC2Q8N2Y8 1516 aa28.99■■■□□ 2.23
GBGT1-208ENST00000540636 GOLGA3Q08378 1498 aa28.99■■■□□ 2.23
GBGT1-208ENST00000540636 HMGXB3Q12766 1538 aa28.96■■■□□ 2.23
GBGT1-208ENST00000540636 NCAPD3P42695 1498 aa28.94■■■□□ 2.22
GBGT1-208ENST00000540636 KIF21BO75037 1637 aa28.88■■■□□ 2.21
GBGT1-208ENST00000540636 CEP164Q9UPV0 1460 aa28.88■■■□□ 2.21
GBGT1-208ENST00000540636 UBTFP17480 764 aaKnown RBP28.86■■■□□ 2.21
GBGT1-208ENST00000540636 TOP2BQ02880 1626 aa28.81■■■□□ 2.2
GBGT1-208ENST00000540636 BIVM-ERCC5R4GMW8 1640 aa28.75■■■□□ 2.19
GBGT1-208ENST00000540636 CFTRP13569 1480 aa28.59■■■□□ 2.17
GBGT1-208ENST00000540636 CLIP1P30622 1438 aa28.57■■■□□ 2.16
GBGT1-208ENST00000540636 RAPGEF2Q9Y4G8 1499 aa28.53■■■□□ 2.16
GBGT1-208ENST00000540636 ERICH3Q5RHP9 1530 aa28.5■■■□□ 2.15
GBGT1-208ENST00000540636 CUX1P39880 1505 aa28.48■■■□□ 2.15
GBGT1-208ENST00000540636 CCER1Q8TC90 406 aaPredicted RBP28.47■■■□□ 2.15
GBGT1-208ENST00000540636 PRDM2Q13029 1718 aa28.47■■■□□ 2.15
GBGT1-208ENST00000540636 VPS8Q8N3P4 1428 aa28.47■■■□□ 2.15
GBGT1-208ENST00000540636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.43■■■□□ 2.14
GBGT1-208ENST00000540636 PRXQ9BXM0 1461 aa28.43■■■□□ 2.14
GBGT1-208ENST00000540636 KIF27Q86VH2 1401 aa28.37■■■□□ 2.13
GBGT1-208ENST00000540636 TTBK1Q5TCY1 1321 aaPredicted RBP28.36■■■□□ 2.13
GBGT1-208ENST00000540636 CADPSQ9ULU8 1353 aa28.29■■■□□ 2.12
GBGT1-208ENST00000540636 APLP2Q06481 763 aa28.29■■■□□ 2.12
GBGT1-208ENST00000540636 CC2D2AQ9P2K1 1620 aa28.2■■■□□ 2.1
GBGT1-208ENST00000540636 ARAP1Q96P48 1450 aa28.12■■■□□ 2.09
GBGT1-208ENST00000540636 RANGAP1P46060 587 aaPredicted RBP28.06■■■□□ 2.08
GBGT1-208ENST00000540636 CUX2O14529 1486 aa28.05■■■□□ 2.08
GBGT1-208ENST00000540636 IGF1RP08069 1367 aa28.02■■■□□ 2.08
GBGT1-208ENST00000540636 FGD5Q6ZNL6 1462 aa28.01■■■□□ 2.07
GBGT1-208ENST00000540636 FANCD2Q9BXW9 1451 aa27.97■■■□□ 2.07
GBGT1-208ENST00000540636 HNRNPUL2Q1KMD3 747 aaKnown RBP27.96■■■□□ 2.07
GBGT1-208ENST00000540636 ARHGAP35Q9NRY4 1499 aa27.93■■■□□ 2.06
GBGT1-208ENST00000540636 CARMIL1Q5VZK9 1371 aa27.9■■■□□ 2.06
GBGT1-208ENST00000540636 DNMBPQ6XZF7 1577 aa27.89■■■□□ 2.06
GBGT1-208ENST00000540636 RRBP1Q9P2E9 1410 aaKnown RBP27.8■■■□□ 2.04
GBGT1-208ENST00000540636 MAP3K1Q13233 1512 aa27.79■■■□□ 2.04
GBGT1-208ENST00000540636 ABCA10Q8WWZ4 1543 aa27.79■■■□□ 2.04
GBGT1-208ENST00000540636 KANK4Q5T7N3 995 aaPredicted RBP27.79■■■□□ 2.04
GBGT1-208ENST00000540636 DIEXFQ68CQ4 756 aaKnown RBP27.79■■■□□ 2.04
GBGT1-208ENST00000540636 TOPBP1Q92547 1522 aa27.78■■■□□ 2.04
GBGT1-208ENST00000540636 LAMC3Q9Y6N6 1575 aa27.76■■■□□ 2.03
GBGT1-208ENST00000540636 CLSPNQ9HAW4 1339 aa27.76■■■□□ 2.03
GBGT1-208ENST00000540636 ZNF316A6NFI3 1004 aaPredicted RBP27.73■■■□□ 2.03
GBGT1-208ENST00000540636 POLA1P09884 1462 aaPredicted RBP27.72■■■□□ 2.03
GBGT1-208ENST00000540636 NESP48681 1621 aa27.67■■■□□ 2.02
GBGT1-208ENST00000540636 CUL7Q14999 1698 aa27.67■■■□□ 2.02
GBGT1-208ENST00000540636 FHAD1B1AJZ9 1412 aa27.66■■■□□ 2.02
GBGT1-208ENST00000540636 RAD54L2Q9Y4B4 1467 aa27.65■■■□□ 2.02
GBGT1-208ENST00000540636 TIAM1Q13009 1591 aa27.65■■■□□ 2.02
GBGT1-208ENST00000540636 CCNB3Q8WWL7 1395 aa27.64■■■□□ 2.01
GBGT1-208ENST00000540636 EFCAB5A4FU69 1503 aa27.58■■■□□ 2.01
GBGT1-208ENST00000540636 DHX57Q6P158 1386 aaKnown RBP27.56■■■□□ 2
GBGT1-208ENST00000540636 WDR97A6NE52 1622 aa27.56■■■□□ 2
GBGT1-208ENST00000540636 PDS5BQ9NTI5 1447 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms