RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 NISCHQ9Y2I1 1504 aa34.52■■■■□ 3.12
CDK5R1-201ENST00000313401 DCAF8L2P0C7V8 631 aa32.19■■■□□ 2.74
CDK5R1-201ENST00000313401 SHROOM4Q9ULL8 1493 aa31.94■■■□□ 2.7
CDK5R1-201ENST00000313401 SUPT5HO00267 1087 aaKnown RBP31.84■■■□□ 2.69
CDK5R1-201ENST00000313401 EHMT2Q96KQ7 1210 aa30.23■■■□□ 2.43
CDK5R1-201ENST00000313401 PCGF6Q9BYE7 350 aa30.08■■■□□ 2.41
CDK5R1-201ENST00000313401 FAM9AQ8IZU1 332 aaPredicted RBP29.79■■■□□ 2.36
CDK5R1-201ENST00000313401 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
CDK5R1-201ENST00000313401 LOC105371045A0A1W2PR82 267 aa29.5■■■□□ 2.31
CDK5R1-201ENST00000313401 TRIM41Q8WV44 630 aa29.26■■■□□ 2.28
CDK5R1-201ENST00000313401 HRCP23327 699 aa29.24■■■□□ 2.27
CDK5R1-201ENST00000313401 TTBK1Q5TCY1 1321 aaPredicted RBP29.18■■■□□ 2.26
CDK5R1-201ENST00000313401 PPARGC1BQ86YN6 1023 aaKnown RBP29.18■■■□□ 2.26
CDK5R1-201ENST00000313401 ZCCHC6Q5VYS8 1495 aaKnown RBP28.91■■■□□ 2.22
CDK5R1-201ENST00000313401 TRIM26Q12899 539 aaPredicted RBP28.78■■■□□ 2.2
CDK5R1-201ENST00000313401 MYO15BQ96JP2 1530 aa28.7■■■□□ 2.19
CDK5R1-201ENST00000313401 RANGAP1P46060 587 aaPredicted RBP28.54■■■□□ 2.16
CDK5R1-201ENST00000313401 CCER1Q8TC90 406 aaPredicted RBP28.51■■■□□ 2.15
CDK5R1-201ENST00000313401 ZEB1P37275 1124 aaPredicted RBP28.43■■■□□ 2.14
CDK5R1-201ENST00000313401 ABCC9O60706 1549 aa28.35■■■□□ 2.13
CDK5R1-201ENST00000313401 UBTFP17480 764 aaKnown RBP28.35■■■□□ 2.13
CDK5R1-201ENST00000313401 CCDC180Q9P1Z9 1646 aa28.3■■■□□ 2.12
CDK5R1-201ENST00000313401 APLP2Q06481 763 aa28.18■■■□□ 2.1
CDK5R1-201ENST00000313401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.17■■■□□ 2.1
CDK5R1-201ENST00000313401 SCRIBQ14160 1630 aa28.06■■■□□ 2.08
CDK5R1-201ENST00000313401 PABPN1Q86U42 306 aaKnown RBP eCLIP27.9■■■□□ 2.06
CDK5R1-201ENST00000313401 DCAF1Q9Y4B6 1507 aa27.9■■■□□ 2.06
CDK5R1-201ENST00000313401 YTHDC1Q96MU7 727 aaKnown RBP27.89■■■□□ 2.06
CDK5R1-201ENST00000313401 HNRNPUL2Q1KMD3 747 aaKnown RBP27.81■■■□□ 2.04
CDK5R1-201ENST00000313401 RSF1Q96T23 1441 aaPredicted RBP27.76■■■□□ 2.03
CDK5R1-201ENST00000313401 CENPBP07199 599 aaPredicted RBP27.74■■■□□ 2.03
CDK5R1-201ENST00000313401 ATP1B4Q9UN42 357 aaPredicted RBP27.55■■■□□ 2
CDK5R1-201ENST00000313401 DIEXFQ68CQ4 756 aaKnown RBP27.53■■■□□ 2
CDK5R1-201ENST00000313401 ITGAEP38570 1179 aa27.48■■□□□ 1.99
CDK5R1-201ENST00000313401 CECR2Q9BXF3 1484 aa27.4■■□□□ 1.98
CDK5R1-201ENST00000313401 CSRNP3Q8WYN3 585 aa27.35■■□□□ 1.97
CDK5R1-201ENST00000313401 RB1CC1Q8TDY2 1594 aa27.27■■□□□ 1.96
CDK5R1-201ENST00000313401 PELP1Q8IZL8 1130 aaKnown RBP27.22■■□□□ 1.95
CDK5R1-201ENST00000313401 GTF3C3Q9Y5Q9 886 aa27.19■■□□□ 1.94
CDK5R1-201ENST00000313401 SCAF1Q9H7N4 1312 aaKnown RBP27.1■■□□□ 1.93
CDK5R1-201ENST00000313401 MROH2BQ7Z745 1585 aa27.05■■□□□ 1.92
CDK5R1-201ENST00000313401 ACIN1Q9UKV3 1341 aaKnown RBP27.03■■□□□ 1.92
CDK5R1-201ENST00000313401 ZNF316A6NFI3 1004 aaPredicted RBP27.01■■□□□ 1.91
CDK5R1-201ENST00000313401 NEUROD1Q13562 356 aa27■■□□□ 1.91
CDK5R1-201ENST00000313401 CEP162Q5TB80 1403 aa26.87■■□□□ 1.89
CDK5R1-201ENST00000313401 NACADO15069 1562 aa26.87■■□□□ 1.89
CDK5R1-201ENST00000313401 SOGA1O94964 1423 aa26.81■■□□□ 1.88
CDK5R1-201ENST00000313401 WIZO95785 1651 aa26.77■■□□□ 1.88
CDK5R1-201ENST00000313401 ABCC8Q09428 1581 aa26.76■■□□□ 1.88
CDK5R1-201ENST00000313401 FAM50AQ14320 339 aaKnown RBP26.76■■□□□ 1.87
CDK5R1-201ENST00000313401 P3H3Q8IVL6 736 aa26.74■■□□□ 1.87
CDK5R1-201ENST00000313401 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
CDK5R1-201ENST00000313401 MIER1Q8N108 512 aa26.64■■□□□ 1.86
CDK5R1-201ENST00000313401 BAZ1AQ9NRL2 1556 aaPredicted RBP26.64■■□□□ 1.86
CDK5R1-201ENST00000313401 CLIP1P30622 1438 aa26.6■■□□□ 1.85
CDK5R1-201ENST00000313401 WRNQ14191 1432 aaPredicted RBP eCLIP26.58■■□□□ 1.85
CDK5R1-201ENST00000313401 TNIKQ9UKE5 1360 aa26.58■■□□□ 1.85
CDK5R1-201ENST00000313401 CNGB1Q14028 1251 aaPredicted RBP26.5■■□□□ 1.83
CDK5R1-201ENST00000313401 GOLGA3Q08378 1498 aa26.5■■□□□ 1.83
CDK5R1-201ENST00000313401 BCANQ96GW7 911 aa26.48■■□□□ 1.83
CDK5R1-201ENST00000313401 NEFLP07196 543 aa26.47■■□□□ 1.83
CDK5R1-201ENST00000313401 RUSC2Q8N2Y8 1516 aa26.44■■□□□ 1.82
CDK5R1-201ENST00000313401 EEA1Q15075 1411 aa26.39■■□□□ 1.81
CDK5R1-201ENST00000313401 ARID3CA6NKF2 412 aa26.32■■□□□ 1.8
CDK5R1-201ENST00000313401 POLR3GLQ9BT43 218 aa26.3■■□□□ 1.8
CDK5R1-201ENST00000313401 HIRIP3Q9BW71 556 aaPredicted RBP26.28■■□□□ 1.8
CDK5R1-201ENST00000313401 BAZ1BQ9UIG0 1483 aaKnown RBP26.26■■□□□ 1.79
CDK5R1-201ENST00000313401 CEP164Q9UPV0 1460 aa26.25■■□□□ 1.79
CDK5R1-201ENST00000313401 DDX10Q13206 875 aaKnown RBP26.21■■□□□ 1.79
CDK5R1-201ENST00000313401 TOP2AP11388 1531 aaKnown RBP26.2■■□□□ 1.79
CDK5R1-201ENST00000313401 TRIM52Q96A61 297 aa26.19■■□□□ 1.78
CDK5R1-201ENST00000313401 MYT1Q01538 1121 aa26.17■■□□□ 1.78
CDK5R1-201ENST00000313401 KANK4Q5T7N3 995 aaPredicted RBP26.16■■□□□ 1.78
CDK5R1-201ENST00000313401 SMARCA4P51532 1647 aa26.07■■□□□ 1.76
CDK5R1-201ENST00000313401 ERICH6Q7L0X2 663 aa26.07■■□□□ 1.76
CDK5R1-201ENST00000313401 ANP32CO43423 234 aa26.04■■□□□ 1.76
CDK5R1-201ENST00000313401 VPS8Q8N3P4 1428 aa26.03■■□□□ 1.76
CDK5R1-201ENST00000313401 RAPGEF2Q9Y4G8 1499 aa25.99■■□□□ 1.75
CDK5R1-201ENST00000313401 SMARCA2P51531 1590 aa25.99■■□□□ 1.75
CDK5R1-201ENST00000313401 SIN3AQ96ST3 1273 aa25.98■■□□□ 1.75
CDK5R1-201ENST00000313401 CHIC2Q9UKJ5 165 aa25.95■■□□□ 1.74
CDK5R1-201ENST00000313401 FKBP8Q14318 412 aa25.94■■□□□ 1.74
CDK5R1-201ENST00000313401 KIF27Q86VH2 1401 aa25.92■■□□□ 1.74
CDK5R1-201ENST00000313401 ZNF326Q5BKZ1 582 aaKnown RBP25.91■■□□□ 1.74
CDK5R1-201ENST00000313401 TONSLQ96HA7 1378 aa25.82■■□□□ 1.72
CDK5R1-201ENST00000313401 ATAD2BQ9ULI0 1458 aa25.81■■□□□ 1.72
CDK5R1-201ENST00000313401 FBLN2P98095 1184 aa25.79■■□□□ 1.72
CDK5R1-201ENST00000313401 CCNB3Q8WWL7 1395 aa25.79■■□□□ 1.72
CDK5R1-201ENST00000313401 RRP7BPQ9NSQ0 103 aa25.73■■□□□ 1.71
CDK5R1-201ENST00000313401 CUX2O14529 1486 aa25.73■■□□□ 1.71
CDK5R1-201ENST00000313401 MTUS2Q5JR59 1369 aa25.71■■□□□ 1.71
CDK5R1-201ENST00000313401 HNRNPUQ00839 825 aaKnown RBP eCLIP25.7■■□□□ 1.7
CDK5R1-201ENST00000313401 ZNF777Q9ULD5 760 aaPredicted RBP25.69■■□□□ 1.7
CDK5R1-201ENST00000313401 IRX6P78412 446 aaPredicted RBP25.68■■□□□ 1.7
CDK5R1-201ENST00000313401 KCNH8Q96L42 1107 aa25.66■■□□□ 1.7
CDK5R1-201ENST00000313401 CARMIL1Q5VZK9 1371 aa25.66■■□□□ 1.7
CDK5R1-201ENST00000313401 SUPT16HQ9Y5B9 1047 aaKnown RBP25.64■■□□□ 1.7
CDK5R1-201ENST00000313401 CLSPNQ9HAW4 1339 aa25.62■■□□□ 1.69
CDK5R1-201ENST00000313401 DHX57Q6P158 1386 aaKnown RBP25.62■■□□□ 1.69
CDK5R1-201ENST00000313401 FAM9BQ8IZU0 186 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms