RNA–Protein interactions for RNA: ENST00000626839.2

KCNQ2-213, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KCNQ2, Length 9,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-213ENST00000626839 DCAF8L2P0C7V8 631 aa29.29■■■□□ 2.28
KCNQ2-213ENST00000626839 PELP1Q8IZL8 1130 aaKnown RBP28.47■■■□□ 2.15
KCNQ2-213ENST00000626839 SUPT5HO00267 1087 aaKnown RBP27.83■■■□□ 2.05
KCNQ2-213ENST00000626839 APLP2Q06481 763 aa27.42■■□□□ 1.98
KCNQ2-213ENST00000626839 NISCHQ9Y2I1 1504 aa27.39■■□□□ 1.97
KCNQ2-213ENST00000626839 FAM9AQ8IZU1 332 aaPredicted RBP27.22■■□□□ 1.95
KCNQ2-213ENST00000626839 SHROOM4Q9ULL8 1493 aa27.15■■□□□ 1.94
KCNQ2-213ENST00000626839 CCER1Q8TC90 406 aaPredicted RBP27.1■■□□□ 1.93
KCNQ2-213ENST00000626839 EHMT2Q96KQ7 1210 aa27.06■■□□□ 1.92
KCNQ2-213ENST00000626839 ERICH6Q7L0X2 663 aa27■■□□□ 1.91
KCNQ2-213ENST00000626839 CENPBP07199 599 aaPredicted RBP26.82■■□□□ 1.88
KCNQ2-213ENST00000626839 ZEB1P37275 1124 aaPredicted RBP26.59■■□□□ 1.85
KCNQ2-213ENST00000626839 MYT1Q01538 1121 aa26.58■■□□□ 1.85
KCNQ2-213ENST00000626839 PCGF6Q9BYE7 350 aa26.4■■□□□ 1.82
KCNQ2-213ENST00000626839 NEFLP07196 543 aa26.4■■□□□ 1.82
KCNQ2-213ENST00000626839 TTBK1Q5TCY1 1321 aaPredicted RBP26.33■■□□□ 1.81
KCNQ2-213ENST00000626839 ATP1B4Q9UN42 357 aaPredicted RBP26.02■■□□□ 1.76
KCNQ2-213ENST00000626839 RANGAP1P46060 587 aaPredicted RBP25.97■■□□□ 1.75
KCNQ2-213ENST00000626839 TRIM41Q8WV44 630 aa25.96■■□□□ 1.75
KCNQ2-213ENST00000626839 DAXXQ9UER7 740 aaPredicted RBP25.93■■□□□ 1.74
KCNQ2-213ENST00000626839 UBTFP17480 764 aaKnown RBP25.85■■□□□ 1.73
KCNQ2-213ENST00000626839 YTHDC1Q96MU7 727 aaKnown RBP25.85■■□□□ 1.73
KCNQ2-213ENST00000626839 TRIM26Q12899 539 aaPredicted RBP25.31■■□□□ 1.64
KCNQ2-213ENST00000626839 ZNF316A6NFI3 1004 aaPredicted RBP25.25■■□□□ 1.63
KCNQ2-213ENST00000626839 MYT1LQ9UL68 1186 aa25.23■■□□□ 1.63
KCNQ2-213ENST00000626839 RTL5Q5HYW3 569 aaPredicted RBP25.22■■□□□ 1.63
KCNQ2-213ENST00000626839 POLR3GLQ9BT43 218 aa25.18■■□□□ 1.62
KCNQ2-213ENST00000626839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.07■■□□□ 1.6
KCNQ2-213ENST00000626839 HNRNPUL2Q1KMD3 747 aaKnown RBP25.07■■□□□ 1.6
KCNQ2-213ENST00000626839 CLSPNQ9HAW4 1339 aa25.05■■□□□ 1.6
KCNQ2-213ENST00000626839 HRCP23327 699 aa25.01■■□□□ 1.59
KCNQ2-213ENST00000626839 PPARGC1BQ86YN6 1023 aaKnown RBP24.99■■□□□ 1.59
KCNQ2-213ENST00000626839 ITGAEP38570 1179 aa24.98■■□□□ 1.59
KCNQ2-213ENST00000626839 SLC4A1APQ9BWU0 796 aaKnown RBP24.92■■□□□ 1.58
KCNQ2-213ENST00000626839 CNGB1Q14028 1251 aaPredicted RBP24.72■■□□□ 1.55
KCNQ2-213ENST00000626839 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.55
KCNQ2-213ENST00000626839 ZBTB47Q9UFB7 747 aaPredicted RBP24.68■■□□□ 1.54
KCNQ2-213ENST00000626839 DIEXFQ68CQ4 756 aaKnown RBP24.65■■□□□ 1.54
KCNQ2-213ENST00000626839 CDK11AQ9UQ88 783 aaPredicted RBP24.45■■□□□ 1.51
KCNQ2-213ENST00000626839 FAM50AQ14320 339 aaKnown RBP24.42■■□□□ 1.5
KCNQ2-213ENST00000626839 ANP32CO43423 234 aa24.38■■□□□ 1.49
KCNQ2-213ENST00000626839 CANXP27824 592 aaKnown RBP24.35■■□□□ 1.49
KCNQ2-213ENST00000626839 TRIM52Q96A61 297 aa24.34■■□□□ 1.49
KCNQ2-213ENST00000626839 NEFMP07197 916 aa24.32■■□□□ 1.48
KCNQ2-213ENST00000626839 LOC105371045A0A1W2PR82 267 aa24.31■■□□□ 1.48
KCNQ2-213ENST00000626839 ANP32AP39687 249 aaKnown RBP24.23■■□□□ 1.47
KCNQ2-213ENST00000626839 ANP32BQ92688 251 aaKnown RBP24.21■■□□□ 1.47
KCNQ2-213ENST00000626839 NEUROD1Q13562 356 aa24.18■■□□□ 1.46
KCNQ2-213ENST00000626839 SLC24A1O60721 1099 aa24.17■■□□□ 1.46
KCNQ2-213ENST00000626839 ZNF326Q5BKZ1 582 aaKnown RBP24.13■■□□□ 1.45
KCNQ2-213ENST00000626839 BCANQ96GW7 911 aa24.11■■□□□ 1.45
KCNQ2-213ENST00000626839 GTF3C3Q9Y5Q9 886 aa24.07■■□□□ 1.44
KCNQ2-213ENST00000626839 HSP90AA1P07900 732 aaKnown RBP23.99■■□□□ 1.43
KCNQ2-213ENST00000626839 GLIPR1L2Q4G1C9 344 aa23.97■■□□□ 1.43
KCNQ2-213ENST00000626839 BCL11AQ9H165 835 aa23.96■■□□□ 1.43
KCNQ2-213ENST00000626839 UPF2Q9HAU5 1272 aaKnown RBP23.95■■□□□ 1.42
KCNQ2-213ENST00000626839 EIF5BO60841 1220 aaKnown RBP23.75■■□□□ 1.39
KCNQ2-213ENST00000626839 NPM2Q86SE8 214 aaKnown RBP23.74■■□□□ 1.39
KCNQ2-213ENST00000626839 FBLN2P98095 1184 aa23.7■■□□□ 1.38
KCNQ2-213ENST00000626839 ESF1Q9H501 851 aaKnown RBP23.65■■□□□ 1.38
KCNQ2-213ENST00000626839 ACIN1Q9UKV3 1341 aaKnown RBP23.63■■□□□ 1.37
KCNQ2-213ENST00000626839 TONSLQ96HA7 1378 aa23.62■■□□□ 1.37
KCNQ2-213ENST00000626839 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.58■■□□□ 1.37
KCNQ2-213ENST00000626839 CDK11BP21127 795 aaKnown RBP23.55■■□□□ 1.36
KCNQ2-213ENST00000626839 ABCC9O60706 1549 aa23.53■■□□□ 1.36
KCNQ2-213ENST00000626839 STAG3Q9UJ98 1225 aa23.48■■□□□ 1.35
KCNQ2-213ENST00000626839 ZNF777Q9ULD5 760 aaPredicted RBP23.45■■□□□ 1.34
KCNQ2-213ENST00000626839 FKBP8Q14318 412 aa23.44■■□□□ 1.34
KCNQ2-213ENST00000626839 MYH16Q9H6N6 1097 aa23.44■■□□□ 1.34
KCNQ2-213ENST00000626839 HNRNPUQ00839 825 aaKnown RBP eCLIP23.43■■□□□ 1.34
KCNQ2-213ENST00000626839 PABPN1Q86U42 306 aaKnown RBP eCLIP23.4■■□□□ 1.34
KCNQ2-213ENST00000626839 CCDC136Q96JN2 1154 aa23.4■■□□□ 1.34
KCNQ2-213ENST00000626839 TMC1Q8TDI8 760 aa23.34■■□□□ 1.33
KCNQ2-213ENST00000626839 WDR43Q15061 677 aaKnown RBP eCLIP23.33■■□□□ 1.33
KCNQ2-213ENST00000626839 ANP32EQ9BTT0 268 aa23.33■■□□□ 1.33
KCNQ2-213ENST00000626839 ARID3CA6NKF2 412 aa23.3■■□□□ 1.32
KCNQ2-213ENST00000626839 P3H3Q8IVL6 736 aa23.3■■□□□ 1.32
KCNQ2-213ENST00000626839 FAM9BQ8IZU0 186 aa23.29■■□□□ 1.32
KCNQ2-213ENST00000626839 NBR1Q14596 966 aa23.28■■□□□ 1.32
KCNQ2-213ENST00000626839 BECN1Q14457 450 aa23.28■■□□□ 1.32
KCNQ2-213ENST00000626839 SCRIBQ14160 1630 aa23.27■■□□□ 1.32
KCNQ2-213ENST00000626839 CHGAP10645 457 aaKnown RBP23.25■■□□□ 1.31
KCNQ2-213ENST00000626839 CSRNP3Q8WYN3 585 aa23.24■■□□□ 1.31
KCNQ2-213ENST00000626839 DCAF1Q9Y4B6 1507 aa23.24■■□□□ 1.31
KCNQ2-213ENST00000626839 NCLP19338 710 aaKnown RBP23.22■■□□□ 1.31
KCNQ2-213ENST00000626839 TRIM44Q96DX7 344 aaPredicted RBP23.21■■□□□ 1.31
KCNQ2-213ENST00000626839 GOLGA6L22H0YM25 854 aa23.21■■□□□ 1.31
KCNQ2-213ENST00000626839 TNNT2P45379 298 aaPredicted RBP23.21■■□□□ 1.31
KCNQ2-213ENST00000626839 DDRGK1Q96HY6 314 aa23.21■■□□□ 1.31
KCNQ2-213ENST00000626839 ARXQ96QS3 562 aa23.2■■□□□ 1.3
KCNQ2-213ENST00000626839 NPM1P06748 294 aaKnown RBP eCLIP23.16■■□□□ 1.3
KCNQ2-213ENST00000626839 ZRSR1Q15695 479 aaKnown RBP23.13■■□□□ 1.29
KCNQ2-213ENST00000626839 DDX10Q13206 875 aaKnown RBP23.13■■□□□ 1.29
KCNQ2-213ENST00000626839 SALL2Q9Y467 1007 aaPredicted RBP23.09■■□□□ 1.29
KCNQ2-213ENST00000626839 MRS2Q9HD23 443 aa23.09■■□□□ 1.29
KCNQ2-213ENST00000626839 CASC1Q6TDU7 716 aa23.09■■□□□ 1.29
KCNQ2-213ENST00000626839 CCDC180Q9P1Z9 1646 aa23.08■■□□□ 1.28
KCNQ2-213ENST00000626839 SCAF1Q9H7N4 1312 aaKnown RBP23■■□□□ 1.27
KCNQ2-213ENST00000626839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.99■■□□□ 1.27
KCNQ2-213ENST00000626839 MTUS2Q5JR59 1369 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms