Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 FKBP10-208ENST00000585664 598 ntTSL 313.86□□□□□ -0.194e-13■□□□□ 11.3
SND1Q7KZF4 TM2D3-205ENST00000558677 878 ntTSL 524.26■■□□□ 1.472e-8■□□□□ 11.3
SND1Q7KZF4 TM2D3-213ENST00000560910 554 ntTSL 217.41■□□□□ 0.382e-8■□□□□ 11.3
SND1Q7KZF4 TM2D3-206ENST00000559024 863 ntTSL 27.12□□□□□ -1.272e-8■□□□□ 11.3
SND1Q7KZF4 COX7C-201ENST00000247655 666 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.739e-10■□□□□ 11.3
SND1Q7KZF4 COX7C-207ENST00000515763 347 ntAPPRIS ALT1 TSL 4 BASIC10.47□□□□□ -0.739e-10■□□□□ 11.3
SND1Q7KZF4 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.129e-10■□□□□ 11.3
SND1Q7KZF4 COX7C-206ENST00000513124 693 ntTSL 57.82□□□□□ -1.169e-10■□□□□ 11.3
SND1Q7KZF4 COX7C-202ENST00000505430 496 ntTSL 36.53□□□□□ -1.369e-10■□□□□ 11.3
SND1Q7KZF4 COX7C-205ENST00000511472 369 ntTSL 26.4□□□□□ -1.389e-10■□□□□ 11.3
SND1Q7KZF4 COMT-208ENST00000428707 724 ntTSL 314.53□□□□□ -0.082e-12■□□□□ 11.3
SND1Q7KZF4 B2M-209ENST00000560556 472 ntTSL 38.94□□□□□ -0.981e-15■□□□□ 11.3
SND1Q7KZF4 B2M-213ENST00000623550 2329 nt8.15□□□□□ -1.11e-15■□□□□ 11.3
SND1Q7KZF4 TMEM214-207ENST00000444135 919 ntTSL 515.51■□□□□ 0.072e-10■□□□□ 11.3
SND1Q7KZF4 RRM1-210ENST00000532170 3166 ntTSL 27.55□□□□□ -1.23e-6■□□□□ 11.3
SND1Q7KZF4 RRM1-212ENST00000533349 2863 ntTSL 26.88□□□□□ -1.313e-6■□□□□ 11.3
SND1Q7KZF4 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.43e-6■□□□□ 11.3
SND1Q7KZF4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.393e-26■□□□□ 11.3
SND1Q7KZF4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.693e-26■□□□□ 11.3
SND1Q7KZF4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.493e-26■□□□□ 11.3
SND1Q7KZF4 ACTG1-209ENST00000575659 742 ntTSL 317.58■□□□□ 0.43e-26■□□□□ 11.3
SND1Q7KZF4 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.063e-26■□□□□ 11.3
SND1Q7KZF4 ACTG1-215ENST00000576917 1958 ntTSL 515.04■□□□□ -03e-26■□□□□ 11.3
SND1Q7KZF4 ACTG1-205ENST00000572105 1168 ntTSL 514.51□□□□□ -0.093e-26■□□□□ 11.3
SND1Q7KZF4 ACTG1-207ENST00000574671 1678 ntTSL 1 (best)13.85□□□□□ -0.193e-26■□□□□ 11.3
SND1Q7KZF4 ACTG1-203ENST00000571691 761 ntTSL 313.62□□□□□ -0.233e-26■□□□□ 11.3
SND1Q7KZF4 ACTG1-211ENST00000575994 856 ntTSL 313.33□□□□□ -0.283e-26■□□□□ 11.3
SND1Q7KZF4 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.33e-26■□□□□ 11.3
SND1Q7KZF4 ACTG1-213ENST00000576214 1024 ntTSL 512.99□□□□□ -0.333e-26■□□□□ 11.3
SND1Q7KZF4 ACTG1-214ENST00000576544 1720 ntTSL 512.85□□□□□ -0.353e-26■□□□□ 11.3
SND1Q7KZF4 ACTG1-212ENST00000576209 1698 ntTSL 1 (best)12.61□□□□□ -0.393e-26■□□□□ 11.3
SND1Q7KZF4 TXN-203ENST00000487892 540 ntTSL 29.33□□□□□ -0.921e-9■□□□□ 11.3
SND1Q7KZF4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.06■■□□□ 1.121e-7■□□□□ 11.3
SND1Q7KZF4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.93■□□□□ 0.141e-7■□□□□ 11.3
SND1Q7KZF4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.111e-7■□□□□ 11.3
SND1Q7KZF4 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC12.66□□□□□ -0.381e-7■□□□□ 11.3
SND1Q7KZF4 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.227e-7■□□□□ 11.3
SND1Q7KZF4 VWCE-201ENST00000301770 3368 ntTSL 1 (best)16.12■□□□□ 0.177e-7■□□□□ 11.3
SND1Q7KZF4 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC13.57□□□□□ -0.247e-7■□□□□ 11.3
SND1Q7KZF4 TGFBI-210ENST00000509749 437 ntTSL 27.95□□□□□ -1.141e-11■□□□□ 11.3
SND1Q7KZF4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.152e-7■□□□□ 11.3
SND1Q7KZF4 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC8.19□□□□□ -1.12e-7■□□□□ 11.3
SND1Q7KZF4 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.292e-7■□□□□ 11.3
SND1Q7KZF4 MAN1B1-215ENST00000545539 573 ntTSL 424.16■■□□□ 1.462e-9■□□□□ 11.3
SND1Q7KZF4 MAN1B1-210ENST00000540346 570 ntTSL 416.34■□□□□ 0.212e-9■□□□□ 11.3
SND1Q7KZF4 C4A-254ENST00000480795 570 ntTSL 213.67□□□□□ -0.223e-41■□□□□ 11.3
SND1Q7KZF4 RRBP1-205ENST00000398782 1191 ntAPPRIS ALT2 TSL 225.13■■□□□ 1.613e-30■□□□□ 11.2
SND1Q7KZF4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.657e-7■□□□□ 11.2
SND1Q7KZF4 PPIF-203ENST00000472580 761 ntTSL 517.47■□□□□ 0.397e-7■□□□□ 11.2
SND1Q7KZF4 PPIF-202ENST00000448165 821 ntTSL 215.94■□□□□ 0.147e-7■□□□□ 11.2
SND1Q7KZF4 NDFIP1-202ENST00000503388 4164 ntTSL 25.16□□□□□ -1.581e-9■□□□□ 11.2
SND1Q7KZF4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.822e-6■□□□□ 11.2
SND1Q7KZF4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.78■□□□□ 0.762e-6■□□□□ 11.2
SND1Q7KZF4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.132e-6■□□□□ 11.2
SND1Q7KZF4 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.132e-6■□□□□ 11.2
SND1Q7KZF4 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.222e-6■□□□□ 11.2
SND1Q7KZF4 SLC25A3-214ENST00000551123 1417 ntTSL 1 (best)12.87□□□□□ -0.352e-6■□□□□ 11.2
SND1Q7KZF4 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.372e-6■□□□□ 11.2
SND1Q7KZF4 SLC25A3-203ENST00000401722 6087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.392e-6■□□□□ 11.2
SND1Q7KZF4 SLC25A3-204ENST00000546766 3236 ntTSL 1 (best)11.19□□□□□ -0.622e-6■□□□□ 11.2
SND1Q7KZF4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.372e-9■□□□□ 11.2
SND1Q7KZF4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.853e-7■□□□□ 11.2
SND1Q7KZF4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.43■□□□□ 0.542e-9■□□□□ 11.2
SND1Q7KZF4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.43■□□□□ 0.542e-9■□□□□ 11.2
SND1Q7KZF4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.322e-9■□□□□ 11.2
SND1Q7KZF4 PYCR2-202ENST00000446534 1341 ntTSL 215.88■□□□□ 0.132e-9■□□□□ 11.2
SND1Q7KZF4 PYCR2-206ENST00000478402 3149 ntTSL 215.71■□□□□ 0.112e-9■□□□□ 11.2
SND1Q7KZF4 PYCR2-205ENST00000472798 422 ntTSL 214.36□□□□□ -0.112e-9■□□□□ 11.2
SND1Q7KZF4 CLCN3-210ENST00000515420 735 ntTSL 313.23□□□□□ -0.291e-6■□□□□ 11.2
SND1Q7KZF4 COPS2-201ENST00000299259 2036 ntTSL 1 (best) BASIC11.02□□□□□ -0.653e-7■□□□□ 11.2
SND1Q7KZF4 PYCR2-207ENST00000489681 597 ntTSL 310.11□□□□□ -0.792e-9■□□□□ 11.2
SND1Q7KZF4 COPS2-207ENST00000560240 514 ntTSL 48.31□□□□□ -1.083e-7■□□□□ 11.2
SND1Q7KZF4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.653e-7■□□□□ 11.2
SND1Q7KZF4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.35□□□□□ -1.713e-7■□□□□ 11.2
SND1Q7KZF4 SLC2A8-210ENST00000477027 730 ntTSL 518.02■□□□□ 0.483e-8■□□□□ 11.2
SND1Q7KZF4 SLC2A8-213ENST00000485806 971 ntTSL 217.04■□□□□ 0.323e-8■□□□□ 11.2
SND1Q7KZF4 ZFYVE27-211ENST00000481956 484 ntTSL 312.79□□□□□ -0.365e-6■□□□□ 11.2
SND1Q7KZF4 CFB-276ENST00000467150 526 ntTSL 28.8□□□□□ -14e-16■□□□□ 11.2
SND1Q7KZF4 DAG1-216ENST00000479935 711 ntTSL 1 (best)15.29■□□□□ 0.045e-8■□□□□ 11.2
SND1Q7KZF4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.44■□□□□ 0.76e-10■□□□□ 11.2
SND1Q7KZF4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.616e-10■□□□□ 11.2
SND1Q7KZF4 CDK4-210ENST00000551888 636 ntTSL 218.17■□□□□ 0.56e-10■□□□□ 11.2
SND1Q7KZF4 CDK4-207ENST00000550419 919 ntTSL 318.13■□□□□ 0.496e-10■□□□□ 11.2
SND1Q7KZF4 CDK4-204ENST00000547281 825 ntTSL 316.68■□□□□ 0.266e-10■□□□□ 11.2
SND1Q7KZF4 CDK4-215ENST00000553237 952 ntTSL 216.37■□□□□ 0.216e-10■□□□□ 11.2
SND1Q7KZF4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.23■□□□□ 0.196e-10■□□□□ 11.2
SND1Q7KZF4 CDK4-203ENST00000546489 776 ntTSL 513.62□□□□□ -0.236e-10■□□□□ 11.2
SND1Q7KZF4 CDK4-213ENST00000552713 685 ntTSL 28.79□□□□□ -16e-10■□□□□ 11.2
SND1Q7KZF4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.354e-8■□□□□ 11.2
SND1Q7KZF4 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.92□□□□□ -0.024e-8■□□□□ 11.2
SND1Q7KZF4 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.114e-8■□□□□ 11.2
SND1Q7KZF4 PHB-214ENST00000614445 1952 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.244e-8■□□□□ 11.2
SND1Q7KZF4 PHB-206ENST00000504124 796 ntTSL 513.1□□□□□ -0.316e-8■□□□□ 11.2
SND1Q7KZF4 PHB-202ENST00000393345 847 ntTSL 210.94□□□□□ -0.666e-8■□□□□ 11.2
SND1Q7KZF4 PHB-207ENST00000506273 431 ntTSL 510.54□□□□□ -0.726e-8■□□□□ 11.2
SND1Q7KZF4 PHB-205ENST00000446735 732 ntTSL 510.29□□□□□ -0.766e-8■□□□□ 11.2
SND1Q7KZF4 PHB-203ENST00000419140 907 ntTSL 59.73□□□□□ -0.854e-8■□□□□ 11.2
SND1Q7KZF4 PHB-212ENST00000512041 694 ntTSL 39.73□□□□□ -0.856e-8■□□□□ 11.2
SND1Q7KZF4 PHB-209ENST00000508009 451 ntTSL 57.48□□□□□ -1.216e-8■□□□□ 11.2
SND1Q7KZF4 SHMT2-225ENST00000556798 525 ntTSL 218.14■□□□□ 0.493e-7■□□□□ 11.2
Retrieved 100 of 13,567 protein–RNA pairs in 78.5 ms