RNA–Protein interactions for RNA: ENST00000552981.5

SLC25A3-217, Transcript of solute carrier family 25 member 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC25A3, Length 1,351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A3-217ENST00000552981 NISCHQ9Y2I1 1504 aa37.38■■■■□ 3.57
SLC25A3-217ENST00000552981 CCDC180Q9P1Z9 1646 aa33.21■■■□□ 2.91
SLC25A3-217ENST00000552981 ABCC9O60706 1549 aa32.34■■■□□ 2.77
SLC25A3-217ENST00000552981 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
SLC25A3-217ENST00000552981 RB1CC1Q8TDY2 1594 aa31.16■■■□□ 2.58
SLC25A3-217ENST00000552981 NACADO15069 1562 aa31.15■■■□□ 2.58
SLC25A3-217ENST00000552981 MYO15BQ96JP2 1530 aa31.03■■■□□ 2.56
SLC25A3-217ENST00000552981 DCAF8L2P0C7V8 631 aa31.01■■■□□ 2.55
SLC25A3-217ENST00000552981 DCAF1Q9Y4B6 1507 aa30.95■■■□□ 2.54
SLC25A3-217ENST00000552981 UNC13AQ9UPW8 1703 aa30.55■■■□□ 2.48
SLC25A3-217ENST00000552981 SCRIBQ14160 1630 aa30.32■■■□□ 2.44
SLC25A3-217ENST00000552981 BICRAQ9NZM4 1560 aa30.3■■■□□ 2.44
SLC25A3-217ENST00000552981 PABPN1Q86U42 306 aaKnown RBP eCLIP30.19■■■□□ 2.42
SLC25A3-217ENST00000552981 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
SLC25A3-217ENST00000552981 DNAJC5BQ9UF47 199 aa29.58■■■□□ 2.33
SLC25A3-217ENST00000552981 EIF4G1Q04637 1599 aaKnown RBP29.45■■■□□ 2.3
SLC25A3-217ENST00000552981 CC2D2AQ9P2K1 1620 aa29.29■■■□□ 2.28
SLC25A3-217ENST00000552981 CECR2Q9BXF3 1484 aa29.13■■■□□ 2.25
SLC25A3-217ENST00000552981 SMARCA4P51532 1647 aa29.01■■■□□ 2.24
SLC25A3-217ENST00000552981 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
SLC25A3-217ENST00000552981 MROH2BQ7Z745 1585 aa28.83■■■□□ 2.21
SLC25A3-217ENST00000552981 ATAD2BQ9ULI0 1458 aa28.8■■■□□ 2.2
SLC25A3-217ENST00000552981 NCAPD3P42695 1498 aa28.74■■■□□ 2.19
SLC25A3-217ENST00000552981 SMARCA2P51531 1590 aa28.74■■■□□ 2.19
SLC25A3-217ENST00000552981 PEG3Q9GZU2 1588 aa28.74■■■□□ 2.19
SLC25A3-217ENST00000552981 HMGXB3Q12766 1538 aa28.65■■■□□ 2.18
SLC25A3-217ENST00000552981 BAZ1BQ9UIG0 1483 aaKnown RBP28.55■■■□□ 2.16
SLC25A3-217ENST00000552981 WIZO95785 1651 aa28.54■■■□□ 2.16
SLC25A3-217ENST00000552981 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
SLC25A3-217ENST00000552981 TOP2AP11388 1531 aaKnown RBP28.24■■■□□ 2.11
SLC25A3-217ENST00000552981 NESP48681 1621 aa28.06■■■□□ 2.08
SLC25A3-217ENST00000552981 LAMC3Q9Y6N6 1575 aa27.98■■■□□ 2.07
SLC25A3-217ENST00000552981 CADPSQ9ULU8 1353 aa27.88■■■□□ 2.05
SLC25A3-217ENST00000552981 CCDC88BA6NC98 1476 aa27.87■■■□□ 2.05
SLC25A3-217ENST00000552981 ERCC6Q03468 1493 aa27.82■■■□□ 2.04
SLC25A3-217ENST00000552981 CFTRP13569 1480 aa27.78■■■□□ 2.04
SLC25A3-217ENST00000552981 SUPT5HO00267 1087 aaKnown RBP27.76■■■□□ 2.03
SLC25A3-217ENST00000552981 KIF21AQ7Z4S6 1674 aa27.75■■■□□ 2.03
SLC25A3-217ENST00000552981 PDS5BQ9NTI5 1447 aa27.73■■■□□ 2.03
SLC25A3-217ENST00000552981 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
SLC25A3-217ENST00000552981 PRDM2Q13029 1718 aa27.63■■■□□ 2.01
SLC25A3-217ENST00000552981 FANCD2Q9BXW9 1451 aa27.6■■■□□ 2.01
SLC25A3-217ENST00000552981 CEP164Q9UPV0 1460 aa27.54■■■□□ 2
SLC25A3-217ENST00000552981 CUX2O14529 1486 aa27.52■■■□□ 2
SLC25A3-217ENST00000552981 MRC2Q9UBG0 1479 aa27.49■■□□□ 1.99
SLC25A3-217ENST00000552981 WDR62O43379 1518 aa27.44■■□□□ 1.98
SLC25A3-217ENST00000552981 URB2Q14146 1524 aaKnown RBP27.35■■□□□ 1.97
SLC25A3-217ENST00000552981 TOPBP1Q92547 1522 aa27.19■■□□□ 1.94
SLC25A3-217ENST00000552981 DNMBPQ6XZF7 1577 aa27.17■■□□□ 1.94
SLC25A3-217ENST00000552981 ABCC8Q09428 1581 aa27.11■■□□□ 1.93
SLC25A3-217ENST00000552981 CUX1P39880 1505 aa27.05■■□□□ 1.92
SLC25A3-217ENST00000552981 POLA1P09884 1462 aaPredicted RBP26.97■■□□□ 1.91
SLC25A3-217ENST00000552981 IFT140Q96RY7 1462 aa26.96■■□□□ 1.91
SLC25A3-217ENST00000552981 TARBP1Q13395 1621 aaKnown RBP26.92■■□□□ 1.9
SLC25A3-217ENST00000552981 FGD5Q6ZNL6 1462 aa26.92■■□□□ 1.9
SLC25A3-217ENST00000552981 SYNJ1O43426 1573 aa26.87■■□□□ 1.89
SLC25A3-217ENST00000552981 ZNF608Q9ULD9 1512 aaPredicted RBP26.87■■□□□ 1.89
SLC25A3-217ENST00000552981 WRNQ14191 1432 aaPredicted RBP eCLIP26.86■■□□□ 1.89
SLC25A3-217ENST00000552981 BIVM-ERCC5R4GMW8 1640 aa26.85■■□□□ 1.89
SLC25A3-217ENST00000552981 RAD54L2Q9Y4B4 1467 aa26.84■■□□□ 1.89
SLC25A3-217ENST00000552981 TOP2BQ02880 1626 aa26.84■■□□□ 1.89
SLC25A3-217ENST00000552981 EIF4G3O43432 1585 aaKnown RBP26.8■■□□□ 1.88
SLC25A3-217ENST00000552981 SOGA1O94964 1423 aa26.79■■□□□ 1.88
SLC25A3-217ENST00000552981 WDR97A6NE52 1622 aa26.76■■□□□ 1.87
SLC25A3-217ENST00000552981 AQRO60306 1485 aaKnown RBP eCLIP26.69■■□□□ 1.869e-10■■■■■ 45.4
SLC25A3-217ENST00000552981 ABCA10Q8WWZ4 1543 aa26.66■■□□□ 1.86
SLC25A3-217ENST00000552981 TDRD9Q8NDG6 1382 aaKnown RBP26.64■■□□□ 1.85
SLC25A3-217ENST00000552981 ABCA5Q8WWZ7 1642 aa26.59■■□□□ 1.85
SLC25A3-217ENST00000552981 PBRM1Q86U86 1689 aa26.52■■□□□ 1.84
SLC25A3-217ENST00000552981 GAPVD1Q14C86 1478 aa26.51■■□□□ 1.83
SLC25A3-217ENST00000552981 GRIN2BQ13224 1484 aa26.48■■□□□ 1.83
SLC25A3-217ENST00000552981 SNAPC4Q5SXM2 1469 aa26.48■■□□□ 1.83
SLC25A3-217ENST00000552981 DNAJC5Q9H3Z4 198 aa26.47■■□□□ 1.83
SLC25A3-217ENST00000552981 CHD1O14646 1710 aa26.43■■□□□ 1.82
SLC25A3-217ENST00000552981 MAGI1Q96QZ7 1491 aaPredicted RBP26.43■■□□□ 1.82
SLC25A3-217ENST00000552981 ADAMTS12P58397 1594 aa26.33■■□□□ 1.81
SLC25A3-217ENST00000552981 ERICH3Q5RHP9 1530 aa26.33■■□□□ 1.81
SLC25A3-217ENST00000552981 SYNJ2O15056 1496 aa26.32■■□□□ 1.8
SLC25A3-217ENST00000552981 OSCARQ8IYS5 282 aa26.3■■□□□ 1.8
SLC25A3-217ENST00000552981 KIF27Q86VH2 1401 aa26.27■■□□□ 1.8
SLC25A3-217ENST00000552981 FBLN2P98095 1184 aa26.23■■□□□ 1.79
SLC25A3-217ENST00000552981 TRIM41Q8WV44 630 aa26.2■■□□□ 1.79
SLC25A3-217ENST00000552981 FHAD1B1AJZ9 1412 aa26.2■■□□□ 1.78
SLC25A3-217ENST00000552981 CHMP7Q8WUX9 453 aaPredicted RBP26.2■■□□□ 1.78
SLC25A3-217ENST00000552981 GRIN2AQ12879 1464 aa26.19■■□□□ 1.78
SLC25A3-217ENST00000552981 CLASP1Q7Z460 1538 aa26.16■■□□□ 1.78
SLC25A3-217ENST00000552981 IGF1RP08069 1367 aa26.16■■□□□ 1.78
SLC25A3-217ENST00000552981 RUSC2Q8N2Y8 1516 aa26.13■■□□□ 1.77
SLC25A3-217ENST00000552981 CUL7Q14999 1698 aa26.13■■□□□ 1.77
SLC25A3-217ENST00000552981 CEP170Q5SW79 1584 aa26.09■■□□□ 1.77
SLC25A3-217ENST00000552981 NUP160Q12769 1436 aa26.08■■□□□ 1.76
SLC25A3-217ENST00000552981 CHIC1Q5VXU3 224 aa26.02■■□□□ 1.76
SLC25A3-217ENST00000552981 RIMBP3CA6NJZ7 1639 aa26.01■■□□□ 1.75
SLC25A3-217ENST00000552981 RIMBP3BA6NNM3 1639 aa26.01■■□□□ 1.75
SLC25A3-217ENST00000552981 ARHGEF11O15085 1522 aa26.01■■□□□ 1.75
SLC25A3-217ENST00000552981 RIMBP3Q9UFD9 1639 aa26.01■■□□□ 1.75
SLC25A3-217ENST00000552981 CARMIL1Q5VZK9 1371 aa25.98■■□□□ 1.75
SLC25A3-217ENST00000552981 SHROOM2Q13796 1616 aa25.9■■□□□ 1.74
SLC25A3-217ENST00000552981 RAPGEF2Q9Y4G8 1499 aa25.87■■□□□ 1.73
SLC25A3-217ENST00000552981 PRXQ9BXM0 1461 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms