RNA–Protein interactions for RNA: ENST00000576214.2

ACTG1-213, Transcript of actin gamma 1, humanhuman

TSL 5

Gene ACTG1, Length 1,024 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-213ENST00000576214 NISCHQ9Y2I1 1504 aa31.71■■■□□ 2.67
ACTG1-213ENST00000576214 CCDC180Q9P1Z9 1646 aa28.48■■■□□ 2.15
ACTG1-213ENST00000576214 ABCC9O60706 1549 aa28.32■■■□□ 2.12
ACTG1-213ENST00000576214 RB1CC1Q8TDY2 1594 aa27■■□□□ 1.91
ACTG1-213ENST00000576214 NACADO15069 1562 aa26.83■■□□□ 1.89
ACTG1-213ENST00000576214 DCAF8L2P0C7V8 631 aa26.62■■□□□ 1.85
ACTG1-213ENST00000576214 UNC13AQ9UPW8 1703 aa26.56■■□□□ 1.84
ACTG1-213ENST00000576214 DNAJC5BQ9UF47 199 aa26.48■■□□□ 1.83
ACTG1-213ENST00000576214 MYO15BQ96JP2 1530 aa26.48■■□□□ 1.83
ACTG1-213ENST00000576214 PABPN1Q86U42 306 aaKnown RBP eCLIP26.33■■□□□ 1.81
ACTG1-213ENST00000576214 ZCCHC6Q5VYS8 1495 aaKnown RBP26.31■■□□□ 1.8
ACTG1-213ENST00000576214 BICRAQ9NZM4 1560 aa26.29■■□□□ 1.8
ACTG1-213ENST00000576214 DCAF1Q9Y4B6 1507 aa26.19■■□□□ 1.78
ACTG1-213ENST00000576214 SCRIBQ14160 1630 aa25.94■■□□□ 1.74
ACTG1-213ENST00000576214 SHROOM4Q9ULL8 1493 aa25.84■■□□□ 1.73
ACTG1-213ENST00000576214 CC2D2AQ9P2K1 1620 aa25.63■■□□□ 1.69
ACTG1-213ENST00000576214 EIF4G1Q04637 1599 aaKnown RBP25.58■■□□□ 1.69
ACTG1-213ENST00000576214 CECR2Q9BXF3 1484 aa25.47■■□□□ 1.67
ACTG1-213ENST00000576214 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
ACTG1-213ENST00000576214 NCAPD3P42695 1498 aa24.75■■□□□ 1.55
ACTG1-213ENST00000576214 ATAD2BQ9ULI0 1458 aa24.7■■□□□ 1.55
ACTG1-213ENST00000576214 SMARCA2P51531 1590 aa24.64■■□□□ 1.54
ACTG1-213ENST00000576214 HMGXB3Q12766 1538 aa24.61■■□□□ 1.53
ACTG1-213ENST00000576214 BAZ1AQ9NRL2 1556 aaPredicted RBP24.6■■□□□ 1.53
ACTG1-213ENST00000576214 PEG3Q9GZU2 1588 aa24.5■■□□□ 1.51
ACTG1-213ENST00000576214 MROH2BQ7Z745 1585 aa24.46■■□□□ 1.51
ACTG1-213ENST00000576214 BAZ1BQ9UIG0 1483 aaKnown RBP24.45■■□□□ 1.51
ACTG1-213ENST00000576214 ERCC6Q03468 1493 aa24.39■■□□□ 1.5
ACTG1-213ENST00000576214 NESP48681 1621 aa24.39■■□□□ 1.49
ACTG1-213ENST00000576214 CUX2O14529 1486 aa24.33■■□□□ 1.49
ACTG1-213ENST00000576214 WIZO95785 1651 aa24.21■■□□□ 1.47
ACTG1-213ENST00000576214 LAMC3Q9Y6N6 1575 aa24.21■■□□□ 1.47
ACTG1-213ENST00000576214 DNAJC5Q9H3Z4 198 aa24.18■■□□□ 1.46
ACTG1-213ENST00000576214 THOC2Q8NI27 1593 aaKnown RBP24.16■■□□□ 1.46
ACTG1-213ENST00000576214 KIF21AQ7Z4S6 1674 aa24.15■■□□□ 1.46
ACTG1-213ENST00000576214 PDS5BQ9NTI5 1447 aa24■■□□□ 1.43
ACTG1-213ENST00000576214 CADPSQ9ULU8 1353 aa23.97■■□□□ 1.43
ACTG1-213ENST00000576214 RSF1Q96T23 1441 aaPredicted RBP23.94■■□□□ 1.42
ACTG1-213ENST00000576214 TOP2AP11388 1531 aaKnown RBP23.86■■□□□ 1.41
ACTG1-213ENST00000576214 MRC2Q9UBG0 1479 aa23.83■■□□□ 1.41
ACTG1-213ENST00000576214 WDR62O43379 1518 aa23.8■■□□□ 1.4
ACTG1-213ENST00000576214 CFTRP13569 1480 aa23.75■■□□□ 1.39
ACTG1-213ENST00000576214 CEP164Q9UPV0 1460 aa23.75■■□□□ 1.39
ACTG1-213ENST00000576214 FANCD2Q9BXW9 1451 aa23.74■■□□□ 1.39
ACTG1-213ENST00000576214 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
ACTG1-213ENST00000576214 URB2Q14146 1524 aaKnown RBP23.58■■□□□ 1.36
ACTG1-213ENST00000576214 CCDC88BA6NC98 1476 aa23.57■■□□□ 1.36
ACTG1-213ENST00000576214 TOPBP1Q92547 1522 aa23.32■■□□□ 1.32
ACTG1-213ENST00000576214 IFT140Q96RY7 1462 aa23.26■■□□□ 1.31
ACTG1-213ENST00000576214 ZNF608Q9ULD9 1512 aaPredicted RBP23.26■■□□□ 1.31
ACTG1-213ENST00000576214 DNMBPQ6XZF7 1577 aa23.26■■□□□ 1.31
ACTG1-213ENST00000576214 TRIM41Q8WV44 630 aa23.22■■□□□ 1.31
ACTG1-213ENST00000576214 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
ACTG1-213ENST00000576214 OSCARQ8IYS5 282 aa23.18■■□□□ 1.3
ACTG1-213ENST00000576214 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
ACTG1-213ENST00000576214 TARBP1Q13395 1621 aaKnown RBP23.16■■□□□ 1.3
ACTG1-213ENST00000576214 POLA1P09884 1462 aaPredicted RBP23.08■■□□□ 1.29
ACTG1-213ENST00000576214 CHD1O14646 1710 aa23.04■■□□□ 1.28
ACTG1-213ENST00000576214 AQRO60306 1485 aaKnown RBP eCLIP23.04■■□□□ 1.284e-13■■■■■ 34.6
ACTG1-213ENST00000576214 RIMBP3CA6NJZ7 1639 aa23.01■■□□□ 1.27
ACTG1-213ENST00000576214 RIMBP3BA6NNM3 1639 aa23.01■■□□□ 1.27
ACTG1-213ENST00000576214 RIMBP3Q9UFD9 1639 aa23.01■■□□□ 1.27
ACTG1-213ENST00000576214 RAD54L2Q9Y4B4 1467 aa23■■□□□ 1.27
ACTG1-213ENST00000576214 CUX1P39880 1505 aa22.98■■□□□ 1.27
ACTG1-213ENST00000576214 FGD5Q6ZNL6 1462 aa22.96■■□□□ 1.27
ACTG1-213ENST00000576214 SOGA1O94964 1423 aa22.93■■□□□ 1.26
ACTG1-213ENST00000576214 SUPT5HO00267 1087 aaKnown RBP22.9■■□□□ 1.26
ACTG1-213ENST00000576214 ARHGEF11O15085 1522 aa22.9■■□□□ 1.26
ACTG1-213ENST00000576214 WDR97A6NE52 1622 aa22.89■■□□□ 1.25
ACTG1-213ENST00000576214 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.25
ACTG1-213ENST00000576214 SNAPC4Q5SXM2 1469 aa22.81■■□□□ 1.24
ACTG1-213ENST00000576214 FBLN2P98095 1184 aa22.79■■□□□ 1.24
ACTG1-213ENST00000576214 PBRM1Q86U86 1689 aa22.78■■□□□ 1.24
ACTG1-213ENST00000576214 GRIN2BQ13224 1484 aa22.74■■□□□ 1.23
ACTG1-213ENST00000576214 MAGI1Q96QZ7 1491 aaPredicted RBP22.73■■□□□ 1.23
ACTG1-213ENST00000576214 CLASP1Q7Z460 1538 aa22.71■■□□□ 1.23
ACTG1-213ENST00000576214 ABCA5Q8WWZ7 1642 aa22.71■■□□□ 1.23
ACTG1-213ENST00000576214 ABCA10Q8WWZ4 1543 aa22.69■■□□□ 1.22
ACTG1-213ENST00000576214 ARAP1Q96P48 1450 aa22.69■■□□□ 1.22
ACTG1-213ENST00000576214 GAPVD1Q14C86 1478 aa22.68■■□□□ 1.22
ACTG1-213ENST00000576214 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
ACTG1-213ENST00000576214 SYNJ1O43426 1573 aa22.67■■□□□ 1.22
ACTG1-213ENST00000576214 SYNJ2O15056 1496 aa22.66■■□□□ 1.22
ACTG1-213ENST00000576214 CYB5RLQ6IPT4 315 aa22.65■■□□□ 1.22
ACTG1-213ENST00000576214 CHMP7Q8WUX9 453 aaPredicted RBP22.64■■□□□ 1.21
ACTG1-213ENST00000576214 TOP2BQ02880 1626 aa22.64■■□□□ 1.21
ACTG1-213ENST00000576214 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.21e-8■□□□□ 10.4
ACTG1-213ENST00000576214 ADAMTS12P58397 1594 aa22.51■■□□□ 1.19
ACTG1-213ENST00000576214 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
ACTG1-213ENST00000576214 CEP170Q5SW79 1584 aa22.44■■□□□ 1.18
ACTG1-213ENST00000576214 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
ACTG1-213ENST00000576214 ERCC6L2Q5T890 1561 aa22.39■■□□□ 1.18
ACTG1-213ENST00000576214 NUP160Q12769 1436 aa22.39■■□□□ 1.17
ACTG1-213ENST00000576214 FHAD1B1AJZ9 1412 aa22.38■■□□□ 1.17
ACTG1-213ENST00000576214 TRHP20396 242 aaPredicted RBP22.37■■□□□ 1.17
ACTG1-213ENST00000576214 SHROOM2Q13796 1616 aa22.35■■□□□ 1.17
ACTG1-213ENST00000576214 RUSC2Q8N2Y8 1516 aa22.21■■□□□ 1.15
ACTG1-213ENST00000576214 CUL7Q14999 1698 aa22.14■■□□□ 1.14
ACTG1-213ENST00000576214 PRG4Q92954 1404 aaPredicted RBP22.14■■□□□ 1.13
ACTG1-213ENST00000576214 KIF27Q86VH2 1401 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms