RNA–Protein interactions for RNA: ENST00000575994.5

ACTG1-211, Transcript of actin gamma 1, humanhuman

TSL 3

Gene ACTG1, Length 856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-211ENST00000575994 NISCHQ9Y2I1 1504 aa31.54■■■□□ 2.64
ACTG1-211ENST00000575994 CCDC180Q9P1Z9 1646 aa28.15■■■□□ 2.1
ACTG1-211ENST00000575994 ABCC9O60706 1549 aa27.82■■■□□ 2.04
ACTG1-211ENST00000575994 RB1CC1Q8TDY2 1594 aa26.64■■□□□ 1.86
ACTG1-211ENST00000575994 DCAF8L2P0C7V8 631 aa26.56■■□□□ 1.84
ACTG1-211ENST00000575994 NACADO15069 1562 aa26.53■■□□□ 1.84
ACTG1-211ENST00000575994 MYO15BQ96JP2 1530 aa26.24■■□□□ 1.79
ACTG1-211ENST00000575994 ZCCHC6Q5VYS8 1495 aaKnown RBP26.24■■□□□ 1.79
ACTG1-211ENST00000575994 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
ACTG1-211ENST00000575994 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
ACTG1-211ENST00000575994 PABPN1Q86U42 306 aaKnown RBP eCLIP25.95■■□□□ 1.74
ACTG1-211ENST00000575994 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
ACTG1-211ENST00000575994 SCRIBQ14160 1630 aa25.73■■□□□ 1.71
ACTG1-211ENST00000575994 DNAJC5BQ9UF47 199 aa25.66■■□□□ 1.7
ACTG1-211ENST00000575994 SHROOM4Q9ULL8 1493 aa25.53■■□□□ 1.68
ACTG1-211ENST00000575994 EIF4G1Q04637 1599 aaKnown RBP25.17■■□□□ 1.62
ACTG1-211ENST00000575994 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
ACTG1-211ENST00000575994 CECR2Q9BXF3 1484 aa25.02■■□□□ 1.6
ACTG1-211ENST00000575994 SMARCA4P51532 1647 aa24.54■■□□□ 1.52
ACTG1-211ENST00000575994 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
ACTG1-211ENST00000575994 ATAD2BQ9ULI0 1458 aa24.46■■□□□ 1.51
ACTG1-211ENST00000575994 NCAPD3P42695 1498 aa24.45■■□□□ 1.51
ACTG1-211ENST00000575994 SMARCA2P51531 1590 aa24.45■■□□□ 1.5
ACTG1-211ENST00000575994 HMGXB3Q12766 1538 aa24.35■■□□□ 1.49
ACTG1-211ENST00000575994 MROH2BQ7Z745 1585 aa24.32■■□□□ 1.48
ACTG1-211ENST00000575994 BAZ1BQ9UIG0 1483 aaKnown RBP24.29■■□□□ 1.48
ACTG1-211ENST00000575994 PEG3Q9GZU2 1588 aa24.26■■□□□ 1.47
ACTG1-211ENST00000575994 ERCC6Q03468 1493 aa24.05■■□□□ 1.44
ACTG1-211ENST00000575994 WIZO95785 1651 aa24.05■■□□□ 1.44
ACTG1-211ENST00000575994 NESP48681 1621 aa23.99■■□□□ 1.43
ACTG1-211ENST00000575994 RSF1Q96T23 1441 aaPredicted RBP23.94■■□□□ 1.42
ACTG1-211ENST00000575994 LAMC3Q9Y6N6 1575 aa23.88■■□□□ 1.41
ACTG1-211ENST00000575994 CUX2O14529 1486 aa23.81■■□□□ 1.4
ACTG1-211ENST00000575994 TOP2AP11388 1531 aaKnown RBP23.79■■□□□ 1.4
ACTG1-211ENST00000575994 CADPSQ9ULU8 1353 aa23.76■■□□□ 1.39
ACTG1-211ENST00000575994 PDS5BQ9NTI5 1447 aa23.76■■□□□ 1.39
ACTG1-211ENST00000575994 KIF21AQ7Z4S6 1674 aa23.69■■□□□ 1.38
ACTG1-211ENST00000575994 THOC2Q8NI27 1593 aaKnown RBP23.66■■□□□ 1.38
ACTG1-211ENST00000575994 CFTRP13569 1480 aa23.56■■□□□ 1.36
ACTG1-211ENST00000575994 MRC2Q9UBG0 1479 aa23.53■■□□□ 1.36
ACTG1-211ENST00000575994 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
ACTG1-211ENST00000575994 FANCD2Q9BXW9 1451 aa23.52■■□□□ 1.36
ACTG1-211ENST00000575994 CCDC88BA6NC98 1476 aa23.49■■□□□ 1.35
ACTG1-211ENST00000575994 WDR62O43379 1518 aa23.43■■□□□ 1.34
ACTG1-211ENST00000575994 PRDM2Q13029 1718 aa23.36■■□□□ 1.33
ACTG1-211ENST00000575994 DNAJC5Q9H3Z4 198 aa23.31■■□□□ 1.32
ACTG1-211ENST00000575994 URB2Q14146 1524 aaKnown RBP23.28■■□□□ 1.32
ACTG1-211ENST00000575994 SUPT5HO00267 1087 aaKnown RBP23.26■■□□□ 1.31
ACTG1-211ENST00000575994 TOPBP1Q92547 1522 aa23.1■■□□□ 1.29
ACTG1-211ENST00000575994 ABCC8Q09428 1581 aa23.08■■□□□ 1.29
ACTG1-211ENST00000575994 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
ACTG1-211ENST00000575994 IFT140Q96RY7 1462 aa23.03■■□□□ 1.28
ACTG1-211ENST00000575994 ZNF608Q9ULD9 1512 aaPredicted RBP22.92■■□□□ 1.26
ACTG1-211ENST00000575994 POLA1P09884 1462 aaPredicted RBP22.89■■□□□ 1.25
ACTG1-211ENST00000575994 EIF4G3O43432 1585 aaKnown RBP22.85■■□□□ 1.25
ACTG1-211ENST00000575994 CUX1P39880 1505 aa22.83■■□□□ 1.25
ACTG1-211ENST00000575994 TARBP1Q13395 1621 aaKnown RBP22.83■■□□□ 1.25
ACTG1-211ENST00000575994 FGD5Q6ZNL6 1462 aa22.82■■□□□ 1.24
ACTG1-211ENST00000575994 RAD54L2Q9Y4B4 1467 aa22.8■■□□□ 1.24
ACTG1-211ENST00000575994 SOGA1O94964 1423 aa22.8■■□□□ 1.24
ACTG1-211ENST00000575994 OSCARQ8IYS5 282 aa22.78■■□□□ 1.24
ACTG1-211ENST00000575994 AQRO60306 1485 aaKnown RBP eCLIP22.78■■□□□ 1.244e-13■■■■■ 34.6
ACTG1-211ENST00000575994 TDRD9Q8NDG6 1382 aaKnown RBP22.71■■□□□ 1.23
ACTG1-211ENST00000575994 WDR97A6NE52 1622 aa22.66■■□□□ 1.22
ACTG1-211ENST00000575994 WRNQ14191 1432 aaPredicted RBP eCLIP22.63■■□□□ 1.211e-8■□□□□ 10.4
ACTG1-211ENST00000575994 FBLN2P98095 1184 aa22.62■■□□□ 1.21
ACTG1-211ENST00000575994 CHD1O14646 1710 aa22.59■■□□□ 1.21
ACTG1-211ENST00000575994 SNAPC4Q5SXM2 1469 aa22.59■■□□□ 1.21
ACTG1-211ENST00000575994 TOP2BQ02880 1626 aa22.57■■□□□ 1.2
ACTG1-211ENST00000575994 GRIN2BQ13224 1484 aa22.57■■□□□ 1.2
ACTG1-211ENST00000575994 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
ACTG1-211ENST00000575994 SYNJ1O43426 1573 aa22.56■■□□□ 1.2
ACTG1-211ENST00000575994 TRIM41Q8WV44 630 aa22.56■■□□□ 1.2
ACTG1-211ENST00000575994 ABCA10Q8WWZ4 1543 aa22.56■■□□□ 1.2
ACTG1-211ENST00000575994 GAPVD1Q14C86 1478 aa22.54■■□□□ 1.2
ACTG1-211ENST00000575994 MAGI1Q96QZ7 1491 aaPredicted RBP22.53■■□□□ 1.2
ACTG1-211ENST00000575994 PBRM1Q86U86 1689 aa22.5■■□□□ 1.19
ACTG1-211ENST00000575994 ABCA5Q8WWZ7 1642 aa22.49■■□□□ 1.19
ACTG1-211ENST00000575994 CHMP7Q8WUX9 453 aaPredicted RBP22.49■■□□□ 1.19
ACTG1-211ENST00000575994 SYNJ2O15056 1496 aa22.45■■□□□ 1.18
ACTG1-211ENST00000575994 RIMBP3CA6NJZ7 1639 aa22.44■■□□□ 1.18
ACTG1-211ENST00000575994 RIMBP3BA6NNM3 1639 aa22.44■■□□□ 1.18
ACTG1-211ENST00000575994 RIMBP3Q9UFD9 1639 aa22.44■■□□□ 1.18
ACTG1-211ENST00000575994 ARHGEF11O15085 1522 aa22.42■■□□□ 1.18
ACTG1-211ENST00000575994 CLASP1Q7Z460 1538 aa22.32■■□□□ 1.16
ACTG1-211ENST00000575994 ADAMTS12P58397 1594 aa22.32■■□□□ 1.16
ACTG1-211ENST00000575994 ERICH3Q5RHP9 1530 aa22.29■■□□□ 1.16
ACTG1-211ENST00000575994 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
ACTG1-211ENST00000575994 FHAD1B1AJZ9 1412 aa22.27■■□□□ 1.16
ACTG1-211ENST00000575994 CYB5RLQ6IPT4 315 aa22.24■■□□□ 1.15
ACTG1-211ENST00000575994 ARAP1Q96P48 1450 aa22.22■■□□□ 1.15
ACTG1-211ENST00000575994 KIF27Q86VH2 1401 aa22.18■■□□□ 1.14
ACTG1-211ENST00000575994 CEP170Q5SW79 1584 aa22.16■■□□□ 1.14
ACTG1-211ENST00000575994 NUP160Q12769 1436 aa22.15■■□□□ 1.14
ACTG1-211ENST00000575994 IGF1RP08069 1367 aa22.06■■□□□ 1.12
ACTG1-211ENST00000575994 CUL7Q14999 1698 aa22.06■■□□□ 1.12
ACTG1-211ENST00000575994 ERCC6L2Q5T890 1561 aa22■■□□□ 1.11
ACTG1-211ENST00000575994 SHROOM2Q13796 1616 aa22■■□□□ 1.11
ACTG1-211ENST00000575994 RUSC2Q8N2Y8 1516 aa22■■□□□ 1.11
ACTG1-211ENST00000575994 CARMIL1Q5VZK9 1371 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms