RNA–Protein interactions for RNA: ENST00000576209.5

ACTG1-212, Transcript of actin gamma 1, humanhuman

TSL 1 (best)

Gene ACTG1, Length 1,698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-212ENST00000576209 NISCHQ9Y2I1 1504 aa28.59■■■□□ 2.17
ACTG1-212ENST00000576209 CCDC180Q9P1Z9 1646 aa25.22■■□□□ 1.63
ACTG1-212ENST00000576209 ABCC9O60706 1549 aa24.47■■□□□ 1.51
ACTG1-212ENST00000576209 DCAF8L2P0C7V8 631 aa23.95■■□□□ 1.43
ACTG1-212ENST00000576209 ZCCHC6Q5VYS8 1495 aaKnown RBP23.88■■□□□ 1.41
ACTG1-212ENST00000576209 NACADO15069 1562 aa23.64■■□□□ 1.37
ACTG1-212ENST00000576209 RB1CC1Q8TDY2 1594 aa23.61■■□□□ 1.37
ACTG1-212ENST00000576209 DCAF1Q9Y4B6 1507 aa23.59■■□□□ 1.37
ACTG1-212ENST00000576209 MYO15BQ96JP2 1530 aa23.52■■□□□ 1.36
ACTG1-212ENST00000576209 SCRIBQ14160 1630 aa23.17■■□□□ 1.3
ACTG1-212ENST00000576209 UNC13AQ9UPW8 1703 aa23.12■■□□□ 1.29
ACTG1-212ENST00000576209 SHROOM4Q9ULL8 1493 aa23■■□□□ 1.27
ACTG1-212ENST00000576209 PABPN1Q86U42 306 aaKnown RBP eCLIP22.97■■□□□ 1.27
ACTG1-212ENST00000576209 BICRAQ9NZM4 1560 aa22.88■■□□□ 1.25
ACTG1-212ENST00000576209 CECR2Q9BXF3 1484 aa22.29■■□□□ 1.16
ACTG1-212ENST00000576209 EIF4G1Q04637 1599 aaKnown RBP22.26■■□□□ 1.15
ACTG1-212ENST00000576209 BAZ1AQ9NRL2 1556 aaPredicted RBP22.13■■□□□ 1.13
ACTG1-212ENST00000576209 SMARCA4P51532 1647 aa22.13■■□□□ 1.13
ACTG1-212ENST00000576209 DNAJC5BQ9UF47 199 aa22.13■■□□□ 1.13
ACTG1-212ENST00000576209 CC2D2AQ9P2K1 1620 aa22.11■■□□□ 1.13
ACTG1-212ENST00000576209 MROH2BQ7Z745 1585 aa22.08■■□□□ 1.13
ACTG1-212ENST00000576209 RSF1Q96T23 1441 aaPredicted RBP21.94■■□□□ 1.1
ACTG1-212ENST00000576209 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
ACTG1-212ENST00000576209 WIZO95785 1651 aa21.9■■□□□ 1.1
ACTG1-212ENST00000576209 SMARCA2P51531 1590 aa21.88■■□□□ 1.09
ACTG1-212ENST00000576209 PEG3Q9GZU2 1588 aa21.83■■□□□ 1.08
ACTG1-212ENST00000576209 SUPT5HO00267 1087 aaKnown RBP21.82■■□□□ 1.08
ACTG1-212ENST00000576209 NCAPD3P42695 1498 aa21.8■■□□□ 1.08
ACTG1-212ENST00000576209 BAZ1BQ9UIG0 1483 aaKnown RBP21.77■■□□□ 1.08
ACTG1-212ENST00000576209 HMGXB3Q12766 1538 aa21.72■■□□□ 1.07
ACTG1-212ENST00000576209 TOP2AP11388 1531 aaKnown RBP21.63■■□□□ 1.05
ACTG1-212ENST00000576209 CCDC88BA6NC98 1476 aa21.4■■□□□ 1.02
ACTG1-212ENST00000576209 NESP48681 1621 aa21.27■■□□□ 1
ACTG1-212ENST00000576209 CADPSQ9ULU8 1353 aa21.22■□□□□ 0.99
ACTG1-212ENST00000576209 LAMC3Q9Y6N6 1575 aa21.19■□□□□ 0.98
ACTG1-212ENST00000576209 CFTRP13569 1480 aa21.15■□□□□ 0.98
ACTG1-212ENST00000576209 ERCC6Q03468 1493 aa21.06■□□□□ 0.96
ACTG1-212ENST00000576209 PDS5BQ9NTI5 1447 aa21.05■□□□□ 0.96
ACTG1-212ENST00000576209 PRDM2Q13029 1718 aa21.05■□□□□ 0.96
ACTG1-212ENST00000576209 KIF21AQ7Z4S6 1674 aa21.03■□□□□ 0.96
ACTG1-212ENST00000576209 FANCD2Q9BXW9 1451 aa21.01■□□□□ 0.95
ACTG1-212ENST00000576209 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
ACTG1-212ENST00000576209 MRC2Q9UBG0 1479 aa20.82■□□□□ 0.92
ACTG1-212ENST00000576209 THOC2Q8NI27 1593 aaKnown RBP20.81■□□□□ 0.92
ACTG1-212ENST00000576209 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
ACTG1-212ENST00000576209 URB2Q14146 1524 aaKnown RBP20.77■□□□□ 0.92
ACTG1-212ENST00000576209 WDR62O43379 1518 aa20.71■□□□□ 0.91
ACTG1-212ENST00000576209 TOPBP1Q92547 1522 aa20.7■□□□□ 0.9
ACTG1-212ENST00000576209 DNMBPQ6XZF7 1577 aa20.69■□□□□ 0.9
ACTG1-212ENST00000576209 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
ACTG1-212ENST00000576209 CUX1P39880 1505 aa20.69■□□□□ 0.9
ACTG1-212ENST00000576209 SYNJ1O43426 1573 aa20.64■□□□□ 0.89
ACTG1-212ENST00000576209 CUX2O14529 1486 aa20.6■□□□□ 0.89
ACTG1-212ENST00000576209 TOP2BQ02880 1626 aa20.58■□□□□ 0.89
ACTG1-212ENST00000576209 FGD5Q6ZNL6 1462 aa20.58■□□□□ 0.88
ACTG1-212ENST00000576209 BIVM-ERCC5R4GMW8 1640 aa20.58■□□□□ 0.88
ACTG1-212ENST00000576209 POLA1P09884 1462 aaPredicted RBP20.55■□□□□ 0.88
ACTG1-212ENST00000576209 TRIM41Q8WV44 630 aa20.53■□□□□ 0.88
ACTG1-212ENST00000576209 RAD54L2Q9Y4B4 1467 aa20.51■□□□□ 0.87
ACTG1-212ENST00000576209 SOGA1O94964 1423 aa20.5■□□□□ 0.87
ACTG1-212ENST00000576209 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
ACTG1-212ENST00000576209 IFT140Q96RY7 1462 aa20.46■□□□□ 0.87
ACTG1-212ENST00000576209 TARBP1Q13395 1621 aaKnown RBP20.43■□□□□ 0.86
ACTG1-212ENST00000576209 ZNF608Q9ULD9 1512 aaPredicted RBP20.39■□□□□ 0.85
ACTG1-212ENST00000576209 TDRD9Q8NDG6 1382 aaKnown RBP20.36■□□□□ 0.85
ACTG1-212ENST00000576209 WDR97A6NE52 1622 aa20.35■□□□□ 0.85
ACTG1-212ENST00000576209 AQRO60306 1485 aaKnown RBP eCLIP20.34■□□□□ 0.854e-18■■■■□ 25.2
ACTG1-212ENST00000576209 ABCA10Q8WWZ4 1543 aa20.34■□□□□ 0.85
ACTG1-212ENST00000576209 EIF4G3O43432 1585 aaKnown RBP20.31■□□□□ 0.84
ACTG1-212ENST00000576209 GAPVD1Q14C86 1478 aa20.25■□□□□ 0.83
ACTG1-212ENST00000576209 ABCA5Q8WWZ7 1642 aa20.24■□□□□ 0.83
ACTG1-212ENST00000576209 KIF27Q86VH2 1401 aa20.23■□□□□ 0.83
ACTG1-212ENST00000576209 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
ACTG1-212ENST00000576209 PBRM1Q86U86 1689 aa20.21■□□□□ 0.83
ACTG1-212ENST00000576209 FAM9AQ8IZU1 332 aaPredicted RBP20.19■□□□□ 0.82
ACTG1-212ENST00000576209 GRIN2BQ13224 1484 aa20.19■□□□□ 0.82
ACTG1-212ENST00000576209 SNAPC4Q5SXM2 1469 aa20.14■□□□□ 0.81
ACTG1-212ENST00000576209 FBLN2P98095 1184 aa20.11■□□□□ 0.81
ACTG1-212ENST00000576209 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
ACTG1-212ENST00000576209 IGF1RP08069 1367 aa20.1■□□□□ 0.81
ACTG1-212ENST00000576209 MAGI1Q96QZ7 1491 aaPredicted RBP20.07■□□□□ 0.8
ACTG1-212ENST00000576209 CHMP7Q8WUX9 453 aaPredicted RBP20.04■□□□□ 0.8
ACTG1-212ENST00000576209 CSRNP3Q8WYN3 585 aa20.03■□□□□ 0.8
ACTG1-212ENST00000576209 ADAMTS12P58397 1594 aa20.03■□□□□ 0.8
ACTG1-212ENST00000576209 EEA1Q15075 1411 aa20.03■□□□□ 0.8
ACTG1-212ENST00000576209 CHD1O14646 1710 aa20.02■□□□□ 0.8
ACTG1-212ENST00000576209 FHAD1B1AJZ9 1412 aa20.01■□□□□ 0.79
ACTG1-212ENST00000576209 CUL7Q14999 1698 aa20.01■□□□□ 0.79
ACTG1-212ENST00000576209 CARMIL1Q5VZK9 1371 aa20■□□□□ 0.79
ACTG1-212ENST00000576209 SYNJ2O15056 1496 aa20■□□□□ 0.79
ACTG1-212ENST00000576209 EHMT2Q96KQ7 1210 aa19.98■□□□□ 0.79
ACTG1-212ENST00000576209 GRIN2AQ12879 1464 aa19.93■□□□□ 0.78
ACTG1-212ENST00000576209 RAPGEF2Q9Y4G8 1499 aa19.92■□□□□ 0.78
ACTG1-212ENST00000576209 PRXQ9BXM0 1461 aa19.9■□□□□ 0.78
ACTG1-212ENST00000576209 OSCARQ8IYS5 282 aa19.89■□□□□ 0.77
ACTG1-212ENST00000576209 CEP170Q5SW79 1584 aa19.84■□□□□ 0.77
ACTG1-212ENST00000576209 KIF21BO75037 1637 aa19.82■□□□□ 0.76
ACTG1-212ENST00000576209 NUP160Q12769 1436 aa19.79■□□□□ 0.76
ACTG1-212ENST00000576209 UBTFP17480 764 aaKnown RBP19.78■□□□□ 0.76
ACTG1-212ENST00000576209 GOLGA3Q08378 1498 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms