RNA–Protein interactions for RNA: ENST00000563744.1

GABARAPL2-202, Transcript of GABA type A receptor associated protein like 2, humanhuman

TSL 1 (best) BASIC

Gene GABARAPL2, Length 791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL2-202ENST00000563744 NISCHQ9Y2I1 1504 aa38.8■■■■□ 3.8
GABARAPL2-202ENST00000563744 CCDC180Q9P1Z9 1646 aa34.67■■■■□ 3.14
GABARAPL2-202ENST00000563744 ABCC9O60706 1549 aa34.42■■■■□ 3.1
GABARAPL2-202ENST00000563744 RB1CC1Q8TDY2 1594 aa32.82■■■□□ 2.84
GABARAPL2-202ENST00000563744 NACADO15069 1562 aa32.66■■■□□ 2.82
GABARAPL2-202ENST00000563744 DCAF8L2P0C7V8 631 aa32.5■■■□□ 2.79
GABARAPL2-202ENST00000563744 MYO15BQ96JP2 1530 aa32.31■■■□□ 2.76
GABARAPL2-202ENST00000563744 ZCCHC6Q5VYS8 1495 aaKnown RBP32.27■■■□□ 2.76
GABARAPL2-202ENST00000563744 UNC13AQ9UPW8 1703 aa32.2■■■□□ 2.75
GABARAPL2-202ENST00000563744 PABPN1Q86U42 306 aaKnown RBP eCLIP32.06■■■□□ 2.72
GABARAPL2-202ENST00000563744 DNAJC5BQ9UF47 199 aa32.04■■■□□ 2.72
GABARAPL2-202ENST00000563744 DCAF1Q9Y4B6 1507 aa32.03■■■□□ 2.72
GABARAPL2-202ENST00000563744 BICRAQ9NZM4 1560 aa31.98■■■□□ 2.71
GABARAPL2-202ENST00000563744 SCRIBQ14160 1630 aa31.69■■■□□ 2.66
GABARAPL2-202ENST00000563744 SHROOM4Q9ULL8 1493 aa31.43■■■□□ 2.62
GABARAPL2-202ENST00000563744 EIF4G1Q04637 1599 aaKnown RBP31.12■■■□□ 2.57
GABARAPL2-202ENST00000563744 CC2D2AQ9P2K1 1620 aa31.1■■■□□ 2.57
GABARAPL2-202ENST00000563744 CECR2Q9BXF3 1484 aa30.93■■■□□ 2.54
GABARAPL2-202ENST00000563744 SMARCA4P51532 1647 aa30.23■■■□□ 2.43
GABARAPL2-202ENST00000563744 NCAPD3P42695 1498 aa30.17■■■□□ 2.42
GABARAPL2-202ENST00000563744 ATAD2BQ9ULI0 1458 aa30.16■■■□□ 2.42
GABARAPL2-202ENST00000563744 BAZ1AQ9NRL2 1556 aaPredicted RBP30.07■■■□□ 2.4
GABARAPL2-202ENST00000563744 SMARCA2P51531 1590 aa30.03■■■□□ 2.4
GABARAPL2-202ENST00000563744 HMGXB3Q12766 1538 aa30■■■□□ 2.39
GABARAPL2-202ENST00000563744 MROH2BQ7Z745 1585 aa29.95■■■□□ 2.39
GABARAPL2-202ENST00000563744 PEG3Q9GZU2 1588 aa29.92■■■□□ 2.38
GABARAPL2-202ENST00000563744 BAZ1BQ9UIG0 1483 aaKnown RBP29.86■■■□□ 2.37
GABARAPL2-202ENST00000563744 NESP48681 1621 aa29.7■■■□□ 2.34
GABARAPL2-202ENST00000563744 ERCC6Q03468 1493 aa29.61■■■□□ 2.33
GABARAPL2-202ENST00000563744 WIZO95785 1651 aa29.61■■■□□ 2.33
GABARAPL2-202ENST00000563744 CUX2O14529 1486 aa29.46■■■□□ 2.31
GABARAPL2-202ENST00000563744 LAMC3Q9Y6N6 1575 aa29.43■■■□□ 2.3
GABARAPL2-202ENST00000563744 RSF1Q96T23 1441 aaPredicted RBP29.41■■■□□ 2.3
GABARAPL2-202ENST00000563744 THOC2Q8NI27 1593 aaKnown RBP29.34■■■□□ 2.29
GABARAPL2-202ENST00000563744 KIF21AQ7Z4S6 1674 aa29.32■■■□□ 2.28
GABARAPL2-202ENST00000563744 CADPSQ9ULU8 1353 aa29.25■■■□□ 2.27
GABARAPL2-202ENST00000563744 TOP2AP11388 1531 aaKnown RBP29.22■■■□□ 2.27
GABARAPL2-202ENST00000563744 PDS5BQ9NTI5 1447 aa29.2■■■□□ 2.26
GABARAPL2-202ENST00000563744 DNAJC5Q9H3Z4 198 aa29.07■■■□□ 2.24
GABARAPL2-202ENST00000563744 CFTRP13569 1480 aa29.01■■■□□ 2.23
GABARAPL2-202ENST00000563744 MRC2Q9UBG0 1479 aa29.01■■■□□ 2.23
GABARAPL2-202ENST00000563744 WDR62O43379 1518 aa28.96■■■□□ 2.23
GABARAPL2-202ENST00000563744 FANCD2Q9BXW9 1451 aa28.95■■■□□ 2.22
GABARAPL2-202ENST00000563744 CEP164Q9UPV0 1460 aa28.94■■■□□ 2.22
GABARAPL2-202ENST00000563744 CCDC88BA6NC98 1476 aa28.88■■■□□ 2.21
GABARAPL2-202ENST00000563744 PRDM2Q13029 1718 aa28.77■■■□□ 2.2
GABARAPL2-202ENST00000563744 URB2Q14146 1524 aaKnown RBP28.75■■■□□ 2.19
GABARAPL2-202ENST00000563744 TOPBP1Q92547 1522 aa28.46■■■□□ 2.15
GABARAPL2-202ENST00000563744 DNMBPQ6XZF7 1577 aa28.37■■■□□ 2.13
GABARAPL2-202ENST00000563744 ZNF608Q9ULD9 1512 aaPredicted RBP28.36■■■□□ 2.13
GABARAPL2-202ENST00000563744 IFT140Q96RY7 1462 aa28.34■■■□□ 2.13
GABARAPL2-202ENST00000563744 ABCC8Q09428 1581 aa28.28■■■□□ 2.12
GABARAPL2-202ENST00000563744 SUPT5HO00267 1087 aaKnown RBP28.26■■■□□ 2.11
GABARAPL2-202ENST00000563744 EIF4G3O43432 1585 aaKnown RBP28.22■■■□□ 2.11
GABARAPL2-202ENST00000563744 TARBP1Q13395 1621 aaKnown RBP28.21■■■□□ 2.11
GABARAPL2-202ENST00000563744 POLA1P09884 1462 aaPredicted RBP28.2■■■□□ 2.1
GABARAPL2-202ENST00000563744 CUX1P39880 1505 aa28.13■■■□□ 2.09
GABARAPL2-202ENST00000563744 RAD54L2Q9Y4B4 1467 aa28.11■■■□□ 2.09
GABARAPL2-202ENST00000563744 AQRO60306 1485 aaKnown RBP eCLIP28.09■■■□□ 2.091e-10■■■■■ 26.8
GABARAPL2-202ENST00000563744 OSCARQ8IYS5 282 aa28.08■■■□□ 2.09
GABARAPL2-202ENST00000563744 FGD5Q6ZNL6 1462 aa28.07■■■□□ 2.08
GABARAPL2-202ENST00000563744 SOGA1O94964 1423 aa28■■■□□ 2.07
GABARAPL2-202ENST00000563744 TDRD9Q8NDG6 1382 aaKnown RBP27.95■■■□□ 2.06
GABARAPL2-202ENST00000563744 TRIM41Q8WV44 630 aa27.94■■■□□ 2.06
GABARAPL2-202ENST00000563744 CHD1O14646 1710 aa27.94■■■□□ 2.06
GABARAPL2-202ENST00000563744 WDR97A6NE52 1622 aa27.91■■■□□ 2.06
GABARAPL2-202ENST00000563744 RIMBP3CA6NJZ7 1639 aa27.85■■■□□ 2.05
GABARAPL2-202ENST00000563744 RIMBP3BA6NNM3 1639 aa27.85■■■□□ 2.05
GABARAPL2-202ENST00000563744 RIMBP3Q9UFD9 1639 aa27.85■■■□□ 2.05
GABARAPL2-202ENST00000563744 SNAPC4Q5SXM2 1469 aa27.83■■■□□ 2.05
GABARAPL2-202ENST00000563744 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
GABARAPL2-202ENST00000563744 SYNJ1O43426 1573 aa27.76■■■□□ 2.03
GABARAPL2-202ENST00000563744 ABCA10Q8WWZ4 1543 aa27.74■■■□□ 2.03
GABARAPL2-202ENST00000563744 FBLN2P98095 1184 aa27.74■■■□□ 2.03
GABARAPL2-202ENST00000563744 BIVM-ERCC5R4GMW8 1640 aa27.74■■■□□ 2.03
GABARAPL2-202ENST00000563744 PBRM1Q86U86 1689 aa27.73■■■□□ 2.03
GABARAPL2-202ENST00000563744 GRIN2BQ13224 1484 aa27.73■■■□□ 2.03
GABARAPL2-202ENST00000563744 ABCA5Q8WWZ7 1642 aa27.73■■■□□ 2.03
GABARAPL2-202ENST00000563744 TOP2BQ02880 1626 aa27.71■■■□□ 2.03
GABARAPL2-202ENST00000563744 MAGI1Q96QZ7 1491 aaPredicted RBP27.7■■■□□ 2.03
GABARAPL2-202ENST00000563744 WRNQ14191 1432 aaPredicted RBP eCLIP27.7■■■□□ 2.03
GABARAPL2-202ENST00000563744 GAPVD1Q14C86 1478 aa27.69■■■□□ 2.02
GABARAPL2-202ENST00000563744 CLASP1Q7Z460 1538 aa27.63■■■□□ 2.01
GABARAPL2-202ENST00000563744 SYNJ2O15056 1496 aa27.63■■■□□ 2.01
GABARAPL2-202ENST00000563744 CHMP7Q8WUX9 453 aaPredicted RBP27.56■■■□□ 2
GABARAPL2-202ENST00000563744 ARAP1Q96P48 1450 aa27.56■■■□□ 2
GABARAPL2-202ENST00000563744 ADAMTS12P58397 1594 aa27.5■■□□□ 1.99
GABARAPL2-202ENST00000563744 CYB5RLQ6IPT4 315 aa27.46■■□□□ 1.99
GABARAPL2-202ENST00000563744 GRIN2AQ12879 1464 aa27.42■■□□□ 1.98
GABARAPL2-202ENST00000563744 ERICH3Q5RHP9 1530 aa27.37■■□□□ 1.97
GABARAPL2-202ENST00000563744 CEP170Q5SW79 1584 aa27.37■■□□□ 1.97
GABARAPL2-202ENST00000563744 FHAD1B1AJZ9 1412 aa27.33■■□□□ 1.97
GABARAPL2-202ENST00000563744 NUP160Q12769 1436 aa27.33■■□□□ 1.96
GABARAPL2-202ENST00000563744 ERCC6L2Q5T890 1561 aa27.29■■□□□ 1.96
GABARAPL2-202ENST00000563744 SHROOM2Q13796 1616 aa27.19■■□□□ 1.94
GABARAPL2-202ENST00000563744 RUSC2Q8N2Y8 1516 aa27.11■■□□□ 1.93
GABARAPL2-202ENST00000563744 KIF27Q86VH2 1401 aa27.1■■□□□ 1.93
GABARAPL2-202ENST00000563744 IGF1RP08069 1367 aa27.09■■□□□ 1.93
GABARAPL2-202ENST00000563744 CUL7Q14999 1698 aa27.04■■□□□ 1.92
GABARAPL2-202ENST00000563744 TRHP20396 242 aaPredicted RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms