RNA–Protein interactions for RNA: ENST00000549338.5

SLC25A3-212, Transcript of solute carrier family 25 member 3, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene SLC25A3, Length 1,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A3-212ENST00000549338 NISCHQ9Y2I1 1504 aa30.74■■■□□ 2.51
SLC25A3-212ENST00000549338 ABCC9O60706 1549 aa27.47■■□□□ 1.99
SLC25A3-212ENST00000549338 CCDC180Q9P1Z9 1646 aa27.35■■□□□ 1.97
SLC25A3-212ENST00000549338 DCAF8L2P0C7V8 631 aa26.14■■□□□ 1.78
SLC25A3-212ENST00000549338 RB1CC1Q8TDY2 1594 aa26.05■■□□□ 1.76
SLC25A3-212ENST00000549338 NACADO15069 1562 aa25.9■■□□□ 1.74
SLC25A3-212ENST00000549338 AEBP2Q6ZN18 517 aaPredicted RBP25.81■■□□□ 1.72
SLC25A3-212ENST00000549338 DNAJC5BQ9UF47 199 aa25.78■■□□□ 1.72
SLC25A3-212ENST00000549338 PABPN1Q86U42 306 aaKnown RBP eCLIP25.72■■□□□ 1.71
SLC25A3-212ENST00000549338 MYO15BQ96JP2 1530 aa25.54■■□□□ 1.68
SLC25A3-212ENST00000549338 ZCCHC6Q5VYS8 1495 aaKnown RBP25.47■■□□□ 1.67
SLC25A3-212ENST00000549338 UNC13AQ9UPW8 1703 aa25.44■■□□□ 1.66
SLC25A3-212ENST00000549338 BICRAQ9NZM4 1560 aa25.36■■□□□ 1.65
SLC25A3-212ENST00000549338 DCAF1Q9Y4B6 1507 aa25.29■■□□□ 1.64
SLC25A3-212ENST00000549338 SCRIBQ14160 1630 aa25.11■■□□□ 1.61
SLC25A3-212ENST00000549338 CHIC1Q5VXU3 224 aa25.06■■□□□ 1.6
SLC25A3-212ENST00000549338 SHROOM4Q9ULL8 1493 aa24.84■■□□□ 1.57
SLC25A3-212ENST00000549338 CC2D2AQ9P2K1 1620 aa24.73■■□□□ 1.55
SLC25A3-212ENST00000549338 EIF4G1Q04637 1599 aaKnown RBP24.7■■□□□ 1.54
SLC25A3-212ENST00000549338 CECR2Q9BXF3 1484 aa24.67■■□□□ 1.54
SLC25A3-212ENST00000549338 NCAPD3P42695 1498 aa23.99■■□□□ 1.43
SLC25A3-212ENST00000549338 ATAD2BQ9ULI0 1458 aa23.96■■□□□ 1.43
SLC25A3-212ENST00000549338 SMARCA4P51532 1647 aa23.91■■□□□ 1.42
SLC25A3-212ENST00000549338 SMARCA2P51531 1590 aa23.8■■□□□ 1.4
SLC25A3-212ENST00000549338 BAZ1AQ9NRL2 1556 aaPredicted RBP23.79■■□□□ 1.4
SLC25A3-212ENST00000549338 MROH2BQ7Z745 1585 aa23.76■■□□□ 1.39
SLC25A3-212ENST00000549338 HMGXB3Q12766 1538 aa23.73■■□□□ 1.39
SLC25A3-212ENST00000549338 BAZ1BQ9UIG0 1483 aaKnown RBP23.71■■□□□ 1.39
SLC25A3-212ENST00000549338 NESP48681 1621 aa23.66■■□□□ 1.38
SLC25A3-212ENST00000549338 ERCC6Q03468 1493 aa23.63■■□□□ 1.37
SLC25A3-212ENST00000549338 PEG3Q9GZU2 1588 aa23.62■■□□□ 1.37
SLC25A3-212ENST00000549338 CUX2O14529 1486 aa23.46■■□□□ 1.35
SLC25A3-212ENST00000549338 DNAJC5Q9H3Z4 198 aa23.45■■□□□ 1.34
SLC25A3-212ENST00000549338 WIZO95785 1651 aa23.44■■□□□ 1.34
SLC25A3-212ENST00000549338 LAMC3Q9Y6N6 1575 aa23.34■■□□□ 1.33
SLC25A3-212ENST00000549338 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.33
SLC25A3-212ENST00000549338 CADPSQ9ULU8 1353 aa23.3■■□□□ 1.32
SLC25A3-212ENST00000549338 PDS5BQ9NTI5 1447 aa23.26■■□□□ 1.31
SLC25A3-212ENST00000549338 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
SLC25A3-212ENST00000549338 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
SLC25A3-212ENST00000549338 TOP2AP11388 1531 aaKnown RBP23.08■■□□□ 1.29
SLC25A3-212ENST00000549338 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
SLC25A3-212ENST00000549338 CFTRP13569 1480 aa23.04■■□□□ 1.28
SLC25A3-212ENST00000549338 FANCD2Q9BXW9 1451 aa23.02■■□□□ 1.28
SLC25A3-212ENST00000549338 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
SLC25A3-212ENST00000549338 WDR62O43379 1518 aa22.96■■□□□ 1.27
SLC25A3-212ENST00000549338 CCDC88BA6NC98 1476 aa22.93■■□□□ 1.26
SLC25A3-212ENST00000549338 URB2Q14146 1524 aaKnown RBP22.84■■□□□ 1.25
SLC25A3-212ENST00000549338 PRDM2Q13029 1718 aa22.62■■□□□ 1.21
SLC25A3-212ENST00000549338 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
SLC25A3-212ENST00000549338 OSCARQ8IYS5 282 aa22.58■■□□□ 1.21
SLC25A3-212ENST00000549338 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
SLC25A3-212ENST00000549338 SUPT5HO00267 1087 aaKnown RBP22.57■■□□□ 1.2
SLC25A3-212ENST00000549338 TRIM41Q8WV44 630 aa22.56■■□□□ 1.2
SLC25A3-212ENST00000549338 IFT140Q96RY7 1462 aa22.52■■□□□ 1.2
SLC25A3-212ENST00000549338 ABCC8Q09428 1581 aa22.47■■□□□ 1.19
SLC25A3-212ENST00000549338 DNMBPQ6XZF7 1577 aa22.46■■□□□ 1.19
SLC25A3-212ENST00000549338 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.189e-10■■■■■ 45.4
SLC25A3-212ENST00000549338 RAD54L2Q9Y4B4 1467 aa22.38■■□□□ 1.17
SLC25A3-212ENST00000549338 POLA1P09884 1462 aaPredicted RBP22.37■■□□□ 1.17
SLC25A3-212ENST00000549338 TARBP1Q13395 1621 aaKnown RBP22.35■■□□□ 1.17
SLC25A3-212ENST00000549338 SOGA1O94964 1423 aa22.33■■□□□ 1.17
SLC25A3-212ENST00000549338 TDRD9Q8NDG6 1382 aaKnown RBP22.33■■□□□ 1.17
SLC25A3-212ENST00000549338 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.16
SLC25A3-212ENST00000549338 FBLN2P98095 1184 aa22.3■■□□□ 1.16
SLC25A3-212ENST00000549338 CUX1P39880 1505 aa22.28■■□□□ 1.16
SLC25A3-212ENST00000549338 FGD5Q6ZNL6 1462 aa22.27■■□□□ 1.16
SLC25A3-212ENST00000549338 RIMBP3CA6NJZ7 1639 aa22.16■■□□□ 1.14
SLC25A3-212ENST00000549338 RIMBP3BA6NNM3 1639 aa22.16■■□□□ 1.14
SLC25A3-212ENST00000549338 RIMBP3Q9UFD9 1639 aa22.16■■□□□ 1.14
SLC25A3-212ENST00000549338 CHD1O14646 1710 aa22.13■■□□□ 1.13
SLC25A3-212ENST00000549338 ARHGEF11O15085 1522 aa22.12■■□□□ 1.13
SLC25A3-212ENST00000549338 SNAPC4Q5SXM2 1469 aa22.11■■□□□ 1.13
SLC25A3-212ENST00000549338 CYB5RLQ6IPT4 315 aa22.11■■□□□ 1.13
SLC25A3-212ENST00000549338 CHMP7Q8WUX9 453 aaPredicted RBP22.1■■□□□ 1.13
SLC25A3-212ENST00000549338 GRIN2BQ13224 1484 aa22.04■■□□□ 1.12
SLC25A3-212ENST00000549338 PHF23Q9BUL5 403 aaPredicted RBP22.04■■□□□ 1.12
SLC25A3-212ENST00000549338 GAPVD1Q14C86 1478 aa22.02■■□□□ 1.12
SLC25A3-212ENST00000549338 MAGI1Q96QZ7 1491 aaPredicted RBP21.98■■□□□ 1.11
SLC25A3-212ENST00000549338 ABCA10Q8WWZ4 1543 aa21.98■■□□□ 1.11
SLC25A3-212ENST00000549338 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
SLC25A3-212ENST00000549338 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
SLC25A3-212ENST00000549338 SYNJ2O15056 1496 aa21.95■■□□□ 1.1
SLC25A3-212ENST00000549338 ARAP1Q96P48 1450 aa21.94■■□□□ 1.1
SLC25A3-212ENST00000549338 SYNJ1O43426 1573 aa21.93■■□□□ 1.1
SLC25A3-212ENST00000549338 CLASP1Q7Z460 1538 aa21.9■■□□□ 1.1
SLC25A3-212ENST00000549338 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
SLC25A3-212ENST00000549338 ABCA5Q8WWZ7 1642 aa21.89■■□□□ 1.09
SLC25A3-212ENST00000549338 SENP3Q9H4L4 574 aaPredicted RBP21.89■■□□□ 1.09
SLC25A3-212ENST00000549338 PBRM1Q86U86 1689 aa21.88■■□□□ 1.09
SLC25A3-212ENST00000549338 BIVM-ERCC5R4GMW8 1640 aa21.86■■□□□ 1.09
SLC25A3-212ENST00000549338 TRHP20396 242 aaPredicted RBP21.8■■□□□ 1.08
SLC25A3-212ENST00000549338 GRIN2AQ12879 1464 aa21.77■■□□□ 1.07
SLC25A3-212ENST00000549338 FHAD1B1AJZ9 1412 aa21.72■■□□□ 1.07
SLC25A3-212ENST00000549338 ADAMTS12P58397 1594 aa21.72■■□□□ 1.07
SLC25A3-212ENST00000549338 NUP160Q12769 1436 aa21.69■■□□□ 1.06
SLC25A3-212ENST00000549338 CEP170Q5SW79 1584 aa21.69■■□□□ 1.06
SLC25A3-212ENST00000549338 ERCC6L2Q5T890 1561 aa21.68■■□□□ 1.06
SLC25A3-212ENST00000549338 ERICH3Q5RHP9 1530 aa21.67■■□□□ 1.06
SLC25A3-212ENST00000549338 JPH4Q96JJ6 628 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms