Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 TMEM38B-202ENST00000374692 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.331e-7■■□□□ 11.5
SND1Q7KZF4 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC12.79□□□□□ -0.361e-7■■□□□ 11.5
SND1Q7KZF4 SUCLG1-204ENST00000483605 655 ntTSL 312.61□□□□□ -0.391e-10■■□□□ 11.5
SND1Q7KZF4 DLD-201ENST00000205402 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.44e-7■■□□□ 11.5
SND1Q7KZF4 SUCLG1-203ENST00000442240 568 ntTSL 512.45□□□□□ -0.421e-10■■□□□ 11.5
SND1Q7KZF4 NUCB2-216ENST00000533738 534 ntTSL 1 (best)12.28□□□□□ -0.441e-7■■□□□ 11.5
SND1Q7KZF4 DLD-202ENST00000415325 1802 ntTSL 212.07□□□□□ -0.484e-7■■□□□ 11.5
SND1Q7KZF4 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.61e-7■■□□□ 11.5
SND1Q7KZF4 ECM1-206ENST00000496744 1030 ntTSL 311.22□□□□□ -0.611e-7■■□□□ 11.5
SND1Q7KZF4 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.756e-10■■□□□ 11.5
SND1Q7KZF4 SMIM30-201ENST00000397764 1070 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.811e-7■■□□□ 11.5
SND1Q7KZF4 DLD-207ENST00000451081 930 ntTSL 1 (best)9.74□□□□□ -0.856e-7■■□□□ 11.5
SND1Q7KZF4 ECM1-205ENST00000490346 502 ntTSL 39.52□□□□□ -0.891e-7■■□□□ 11.5
SND1Q7KZF4 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -11e-7■■□□□ 11.5
SND1Q7KZF4 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -16e-10■■□□□ 11.5
SND1Q7KZF4 NUCB2-210ENST00000530527 1837 ntTSL 28.67□□□□□ -1.021e-7■■□□□ 11.5
SND1Q7KZF4 DLD-205ENST00000440410 1993 ntTSL 2 BASIC8.57□□□□□ -1.044e-7■■□□□ 11.5
SND1Q7KZF4 NUCB2-204ENST00000526120 496 ntTSL 1 (best)8.51□□□□□ -1.051e-7■■□□□ 11.5
SND1Q7KZF4 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC8.37□□□□□ -1.071e-7■■□□□ 11.5
SND1Q7KZF4 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.121e-7■■□□□ 11.5
SND1Q7KZF4 IGF2R-202ENST00000464636 570 ntTSL 57.99□□□□□ -1.131e-14■■□□□ 11.5
SND1Q7KZF4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.161e-10■■□□□ 11.5
SND1Q7KZF4 DLD-209ENST00000460577 600 ntTSL 27.6□□□□□ -1.196e-7■■□□□ 11.5
SND1Q7KZF4 SMIM30-203ENST00000439551 706 ntTSL 27.07□□□□□ -1.281e-7■■□□□ 11.5
SND1Q7KZF4 DLD-206ENST00000450038 682 ntTSL 57.02□□□□□ -1.296e-7■■□□□ 11.5
SND1Q7KZF4 DLD-208ENST00000453354 537 ntTSL 47.02□□□□□ -1.296e-7■■□□□ 11.5
SND1Q7KZF4 RNF149-206ENST00000490553 592 ntTSL 46.91□□□□□ -1.38e-15■■□□□ 11.5
SND1Q7KZF4 TMEM38B-204ENST00000435034 721 ntTSL 36.66□□□□□ -1.341e-7■■□□□ 11.5
SND1Q7KZF4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.97□□□□□ -1.454e-7■■□□□ 11.5
SND1Q7KZF4 RNF149-203ENST00000463726 622 ntTSL 45.91□□□□□ -1.468e-15■■□□□ 11.5
SND1Q7KZF4 DLD-203ENST00000417551 2041 ntTSL 55.05□□□□□ -1.64e-7■■□□□ 11.5
SND1Q7KZF4 SMIM30-202ENST00000413744 818 ntTSL 24.9□□□□□ -1.631e-7■■□□□ 11.5
SND1Q7KZF4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.78□□□□□ -1.641e-7■■□□□ 11.5
SND1Q7KZF4 NUCB2-217ENST00000533773 1839 ntTSL 54.58□□□□□ -1.681e-7■■□□□ 11.5
SND1Q7KZF4 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.4□□□□□ -1.716e-7■■□□□ 11.5
SND1Q7KZF4 SUCLG1-209ENST00000491642 717 ntTSL 34.27□□□□□ -1.731e-10■■□□□ 11.5
SND1Q7KZF4 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.372e-7■■□□□ 11.5
SND1Q7KZF4 RPS19-207ENST00000600467 420 ntTSL 221.94■■□□□ 1.16e-26■■□□□ 11.5
SND1Q7KZF4 RPS19-204ENST00000598399 1172 ntTSL 513.32□□□□□ -0.286e-26■■□□□ 11.5
SND1Q7KZF4 RPS19-203ENST00000598261 307 ntTSL 312.4□□□□□ -0.426e-26■■□□□ 11.5
SND1Q7KZF4 RPS19-208ENST00000601492 342 ntTSL 58.59□□□□□ -1.036e-26■■□□□ 11.5
SND1Q7KZF4 SLC33A1-204ENST00000468581 764 ntTSL 36.48□□□□□ -1.372e-6■■□□□ 11.5
SND1Q7KZF4 SLC33A1-206ENST00000496772 555 ntTSL 35.32□□□□□ -1.562e-6■■□□□ 11.5
SND1Q7KZF4 A2M-213ENST00000546069 593 ntTSL 57.16□□□□□ -1.261e-70■■□□□ 11.5
SND1Q7KZF4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.54■□□□□ 0.564e-8■■□□□ 11.5
SND1Q7KZF4 SLC35A2-214ENST00000635238 584 ntTSL 320.39■□□□□ 0.857e-7■■□□□ 11.5
SND1Q7KZF4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.641e-7■■□□□ 11.5
SND1Q7KZF4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.551e-7■■□□□ 11.5
SND1Q7KZF4 SCAMP4-204ENST00000414057 1477 ntTSL 1 (best)17.3■□□□□ 0.361e-7■■□□□ 11.5
SND1Q7KZF4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.42■□□□□ 0.221e-7■■□□□ 11.5
SND1Q7KZF4 SYVN1-215ENST00000533685 485 ntTSL 312.89□□□□□ -0.353e-8■■□□□ 11.5
SND1Q7KZF4 SYVN1-205ENST00000525874 475 ntTSL 311.46□□□□□ -0.573e-8■■□□□ 11.5
SND1Q7KZF4 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.31□□□□□ -0.127e-12■■□□□ 11.5
SND1Q7KZF4 PCLAF-201ENST00000300035 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.247e-12■■□□□ 11.5
SND1Q7KZF4 PCLAF-208ENST00000560234 690 ntTSL 210.21□□□□□ -0.777e-12■■□□□ 11.5
SND1Q7KZF4 AC087632.1-210ENST00000635593 668 ntTSL 58.1□□□□□ -1.117e-12■■□□□ 11.5
SND1Q7KZF4 AC087632.1-205ENST00000635704 670 ntTSL 37.85□□□□□ -1.157e-12■■□□□ 11.5
SND1Q7KZF4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC7.81□□□□□ -1.167e-12■■□□□ 11.5
SND1Q7KZF4 PCLAF-204ENST00000558043 689 ntTSL 27.77□□□□□ -1.177e-12■■□□□ 11.5
SND1Q7KZF4 AC087632.1-208ENST00000635511 920 ntTSL 57.68□□□□□ -1.187e-12■■□□□ 11.5
SND1Q7KZF4 AC087632.1-214ENST00000635320 568 ntTSL 47.27□□□□□ -1.257e-12■■□□□ 11.5
SND1Q7KZF4 AC087632.1-203ENST00000634318 1033 ntTSL 57.22□□□□□ -1.257e-12■■□□□ 11.5
SND1Q7KZF4 AC087632.1-206ENST00000635605 757 ntTSL 56.77□□□□□ -1.337e-12■■□□□ 11.5
SND1Q7KZF4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.1□□□□□ -1.437e-12■■□□□ 11.5
SND1Q7KZF4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.587e-12■■□□□ 11.5
SND1Q7KZF4 AC087632.1-207ENST00000634529 372 ntTSL 44.88□□□□□ -1.637e-12■■□□□ 11.5
SND1Q7KZF4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.39■■□□□ 1.174e-9■■□□□ 11.5
SND1Q7KZF4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.62■□□□□ 0.734e-9■■□□□ 11.5
SND1Q7KZF4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.564e-9■■□□□ 11.5
SND1Q7KZF4 FKBP10-209ENST00000585922 563 ntTSL 419.02■□□□□ 0.643e-14■■□□□ 11.5
SND1Q7KZF4 TM2D3-209ENST00000560013 1868 ntTSL 224.54■■□□□ 1.521e-8■■□□□ 11.5
SND1Q7KZF4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.521e-8■■□□□ 11.5
SND1Q7KZF4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.48■□□□□ 0.231e-8■■□□□ 11.5
SND1Q7KZF4 TM2D3-215ENST00000561373 1734 ntTSL 2 BASIC11.72□□□□□ -0.531e-8■■□□□ 11.5
SND1Q7KZF4 TM2D3-202ENST00000347970 1329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.541e-8■■□□□ 11.5
SND1Q7KZF4 TM2D3-203ENST00000428002 1267 ntTSL 2 BASIC10.7□□□□□ -0.71e-8■■□□□ 11.5
SND1Q7KZF4 TM2D3-204ENST00000558129 864 ntTSL 310.16□□□□□ -0.781e-8■■□□□ 11.5
SND1Q7KZF4 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.67■□□□□ 0.16e-42■■□□□ 11.5
SND1Q7KZF4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.161e-6■■□□□ 11.5
SND1Q7KZF4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.96■□□□□ 0.951e-6■■□□□ 11.5
SND1Q7KZF4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.36■□□□□ 0.371e-6■■□□□ 11.5
SND1Q7KZF4 FADS3-208ENST00000529404 2379 ntTSL 216.55■□□□□ 0.241e-6■■□□□ 11.5
SND1Q7KZF4 FADS3-211ENST00000533676 5314 ntTSL 216.28■□□□□ 0.21e-6■■□□□ 11.5
SND1Q7KZF4 FADS3-206ENST00000527379 768 ntTSL 315.53■□□□□ 0.081e-6■■□□□ 11.5
SND1Q7KZF4 SPCS3-203ENST00000507678 2655 ntTSL 224.05■■□□□ 1.443e-12■■□□□ 11.5
SND1Q7KZF4 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.043e-12■■□□□ 11.5
SND1Q7KZF4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.55□□□□□ -0.081e-12■■□□□ 11.5
SND1Q7KZF4 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.221e-12■■□□□ 11.5
SND1Q7KZF4 SLIRP-211ENST00000557623 865 ntTSL 2 BASIC12.96□□□□□ -0.331e-12■■□□□ 11.5
SND1Q7KZF4 SLIRP-209ENST00000557342 408 ntTSL 1 (best) BASIC12.96□□□□□ -0.331e-12■■□□□ 11.5
SND1Q7KZF4 SLIRP-206ENST00000556375 408 ntTSL 211.93□□□□□ -0.51e-12■■□□□ 11.5
SND1Q7KZF4 SLIRP-205ENST00000556310 626 ntTSL 211.93□□□□□ -0.51e-12■■□□□ 11.5
SND1Q7KZF4 SLIRP-212ENST00000613856 420 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.511e-12■■□□□ 11.5
SND1Q7KZF4 SLIRP-204ENST00000555890 471 ntTSL 28.28□□□□□ -1.081e-12■■□□□ 11.5
SND1Q7KZF4 SLIRP-202ENST00000553981 285 ntTSL 34.36□□□□□ -1.711e-12■■□□□ 11.5
SND1Q7KZF4 SLIRP-208ENST00000556956 450 ntTSL 23.72□□□□□ -1.811e-12■■□□□ 11.5
SND1Q7KZF4 SLC20A1-203ENST00000423633 668 ntTSL 29.5□□□□□ -0.896e-7■■□□□ 11.5
SND1Q7KZF4 SLC20A1-208ENST00000492076 613 ntTSL 37.31□□□□□ -1.246e-7■■□□□ 11.5
SND1Q7KZF4 ATP2A2-210ENST00000550262 3670 ntTSL 27.36□□□□□ -1.235e-10■■□□□ 11.5
SND1Q7KZF4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.953e-6■■□□□ 11.4
Retrieved 100 of 13,567 protein–RNA pairs in 70.1 ms