RNA–Protein interactions for RNA: ENST00000550262.1

ATP2A2-210, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 2

Gene ATP2A2, Length 3,670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-210ENST00000550262 NISCHQ9Y2I1 1504 aa12.76□□□□□ -0.37
ATP2A2-210ENST00000550262 CCDC180Q9P1Z9 1646 aa12.57□□□□□ -0.4
ATP2A2-210ENST00000550262 SHROOM4Q9ULL8 1493 aa12.06□□□□□ -0.48
ATP2A2-210ENST00000550262 MYO15BQ96JP2 1530 aa11.93□□□□□ -0.5
ATP2A2-210ENST00000550262 HRCP23327 699 aa11.63□□□□□ -0.55
ATP2A2-210ENST00000550262 PELP1Q8IZL8 1130 aaKnown RBP11.62□□□□□ -0.55
ATP2A2-210ENST00000550262 UNC13AQ9UPW8 1703 aa11.53□□□□□ -0.56
ATP2A2-210ENST00000550262 DCAF1Q9Y4B6 1507 aa11.51□□□□□ -0.57
ATP2A2-210ENST00000550262 NACADO15069 1562 aa11.28□□□□□ -0.6
ATP2A2-210ENST00000550262 MYT1Q01538 1121 aa11.27□□□□□ -0.61
ATP2A2-210ENST00000550262 ZCCHC6Q5VYS8 1495 aaKnown RBP11.15□□□□□ -0.62
ATP2A2-210ENST00000550262 RB1CC1Q8TDY2 1594 aa11.14□□□□□ -0.63
ATP2A2-210ENST00000550262 SCAF1Q9H7N4 1312 aaKnown RBP11.13□□□□□ -0.63
ATP2A2-210ENST00000550262 PPARGC1BQ86YN6 1023 aaKnown RBP11.09□□□□□ -0.63
ATP2A2-210ENST00000550262 BICRAQ9NZM4 1560 aa11.08□□□□□ -0.64
ATP2A2-210ENST00000550262 SUPT5HO00267 1087 aaKnown RBP11.03□□□□□ -0.64
ATP2A2-210ENST00000550262 TTBK1Q5TCY1 1321 aaPredicted RBP11.02□□□□□ -0.65
ATP2A2-210ENST00000550262 PCGF6Q9BYE7 350 aa10.99□□□□□ -0.65
ATP2A2-210ENST00000550262 EIF4G1Q04637 1599 aaKnown RBP10.9□□□□□ -0.66
ATP2A2-210ENST00000550262 SLC24A1O60721 1099 aa10.87□□□□□ -0.67
ATP2A2-210ENST00000550262 CHIC1Q5VXU3 224 aa10.79□□□□□ -0.68
ATP2A2-210ENST00000550262 ABCC9O60706 1549 aa10.76□□□□□ -0.69
ATP2A2-210ENST00000550262 CUX2O14529 1486 aa10.74□□□□□ -0.69
ATP2A2-210ENST00000550262 PEG3Q9GZU2 1588 aa10.67□□□□□ -0.7
ATP2A2-210ENST00000550262 LOC105371045A0A1W2PR82 267 aa10.65□□□□□ -0.7
ATP2A2-210ENST00000550262 ACIN1Q9UKV3 1341 aaKnown RBP10.64□□□□□ -0.71
ATP2A2-210ENST00000550262 PRDM2Q13029 1718 aa10.62□□□□□ -0.71
ATP2A2-210ENST00000550262 ZEB1P37275 1124 aaPredicted RBP10.58□□□□□ -0.72
ATP2A2-210ENST00000550262 TRIM26Q12899 539 aaPredicted RBP10.57□□□□□ -0.72
ATP2A2-210ENST00000550262 SMARCA2P51531 1590 aa10.56□□□□□ -0.72
ATP2A2-210ENST00000550262 APLP2Q06481 763 aa10.55□□□□□ -0.72
ATP2A2-210ENST00000550262 WRNQ14191 1432 aaPredicted RBP eCLIP10.54□□□□□ -0.72
ATP2A2-210ENST00000550262 AEBP2Q6ZN18 517 aaPredicted RBP10.54□□□□□ -0.72
ATP2A2-210ENST00000550262 NEUROD1Q13562 356 aa10.53□□□□□ -0.72
ATP2A2-210ENST00000550262 THOC2Q8NI27 1593 aaKnown RBP10.51□□□□□ -0.73
ATP2A2-210ENST00000550262 WDR97A6NE52 1622 aa10.49□□□□□ -0.73
ATP2A2-210ENST00000550262 TRIM41Q8WV44 630 aa10.47□□□□□ -0.73
ATP2A2-210ENST00000550262 HMGXB3Q12766 1538 aa10.45□□□□□ -0.74
ATP2A2-210ENST00000550262 CC2D2AQ9P2K1 1620 aa10.41□□□□□ -0.74
ATP2A2-210ENST00000550262 PRKCSHP14314 528 aaPredicted RBP10.4□□□□□ -0.74
ATP2A2-210ENST00000550262 FAM9AQ8IZU1 332 aaPredicted RBP10.4□□□□□ -0.74
ATP2A2-210ENST00000550262 DCAF8L2P0C7V8 631 aa10.38□□□□□ -0.75
ATP2A2-210ENST00000550262 BCL11AQ9H165 835 aa10.36□□□□□ -0.75
ATP2A2-210ENST00000550262 EHMT2Q96KQ7 1210 aa10.3□□□□□ -0.76
ATP2A2-210ENST00000550262 CLSPNQ9HAW4 1339 aa10.3□□□□□ -0.76
ATP2A2-210ENST00000550262 GTF3C3Q9Y5Q9 886 aa10.26□□□□□ -0.77
ATP2A2-210ENST00000550262 BAZ1BQ9UIG0 1483 aaKnown RBP10.22□□□□□ -0.77
ATP2A2-210ENST00000550262 ANP32EQ9BTT0 268 aa10.21□□□□□ -0.78
ATP2A2-210ENST00000550262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.19□□□□□ -0.78
ATP2A2-210ENST00000550262 BAZ1AQ9NRL2 1556 aaPredicted RBP10.18□□□□□ -0.78
ATP2A2-210ENST00000550262 LAMC3Q9Y6N6 1575 aa10.18□□□□□ -0.78
ATP2A2-210ENST00000550262 RSF1Q96T23 1441 aaPredicted RBP10.17□□□□□ -0.78
ATP2A2-210ENST00000550262 WDR62O43379 1518 aa10.12□□□□□ -0.79
ATP2A2-210ENST00000550262 TSHZ2Q9NRE2 1034 aa10.12□□□□□ -0.79
ATP2A2-210ENST00000550262 CENPBP07199 599 aaPredicted RBP10.11□□□□□ -0.79
ATP2A2-210ENST00000550262 KIF21BO75037 1637 aa10.11□□□□□ -0.79
ATP2A2-210ENST00000550262 DIEXFQ68CQ4 756 aaKnown RBP10.11□□□□□ -0.79
ATP2A2-210ENST00000550262 CCER1Q8TC90 406 aaPredicted RBP10.09□□□□□ -0.79
ATP2A2-210ENST00000550262 YTHDC1Q96MU7 727 aaKnown RBP10.06□□□□□ -0.8
ATP2A2-210ENST00000550262 NCAPD3P42695 1498 aa10.05□□□□□ -0.8
ATP2A2-210ENST00000550262 DNAJC5Q9H3Z4 198 aa10.04□□□□□ -0.8
ATP2A2-210ENST00000550262 POLR1AO95602 1720 aaPredicted RBP10.04□□□□□ -0.8
ATP2A2-210ENST00000550262 CSRNP3Q8WYN3 585 aa10.02□□□□□ -0.81
ATP2A2-210ENST00000550262 SUPT16HQ9Y5B9 1047 aaKnown RBP10□□□□□ -0.81
ATP2A2-210ENST00000550262 SYNJ1O43426 1573 aa9.97□□□□□ -0.81
ATP2A2-210ENST00000550262 KDM5BQ9UGL1 1544 aa9.93□□□□□ -0.82
ATP2A2-210ENST00000550262 MAPKBP1O60336 1514 aa9.93□□□□□ -0.82
ATP2A2-210ENST00000550262 DAXXQ9UER7 740 aaPredicted RBP9.92□□□□□ -0.82
ATP2A2-210ENST00000550262 ABCA5Q8WWZ7 1642 aa9.92□□□□□ -0.82
ATP2A2-210ENST00000550262 MSH5O43196 834 aa9.92□□□□□ -0.82
ATP2A2-210ENST00000550262 WIZO95785 1651 aa9.91□□□□□ -0.82
ATP2A2-210ENST00000550262 ERICH6Q7L0X2 663 aa9.91□□□□□ -0.82
ATP2A2-210ENST00000550262 MIER1Q8N108 512 aa9.9□□□□□ -0.82
ATP2A2-210ENST00000550262 FANCIQ9NVI1 1328 aa9.9□□□□□ -0.83
ATP2A2-210ENST00000550262 DNAJC5BQ9UF47 199 aa9.89□□□□□ -0.83
ATP2A2-210ENST00000550262 TNIKQ9UKE5 1360 aa9.88□□□□□ -0.83
ATP2A2-210ENST00000550262 ZNF316A6NFI3 1004 aaPredicted RBP9.88□□□□□ -0.83
ATP2A2-210ENST00000550262 TOP2AP11388 1531 aaKnown RBP9.86□□□□□ -0.83
ATP2A2-210ENST00000550262 PLPPR3Q6T4P5 718 aa9.86□□□□□ -0.83
ATP2A2-210ENST00000550262 KIF21AQ7Z4S6 1674 aa9.86□□□□□ -0.83
ATP2A2-210ENST00000550262 UBE2Q2Q8WVN8 375 aa9.85□□□□□ -0.83
ATP2A2-210ENST00000550262 MROH2BQ7Z745 1585 aa9.84□□□□□ -0.83
ATP2A2-210ENST00000550262 EEA1Q15075 1411 aa9.84□□□□□ -0.83
ATP2A2-210ENST00000550262 CECR2Q9BXF3 1484 aa9.83□□□□□ -0.84
ATP2A2-210ENST00000550262 SCRIBQ14160 1630 aa9.82□□□□□ -0.84
ATP2A2-210ENST00000550262 RRBP1Q9P2E9 1410 aaKnown RBP9.82□□□□□ -0.84
ATP2A2-210ENST00000550262 CEP162Q5TB80 1403 aa9.82□□□□□ -0.84
ATP2A2-210ENST00000550262 BIVM-ERCC5R4GMW8 1640 aa9.81□□□□□ -0.84
ATP2A2-210ENST00000550262 ABCC8Q09428 1581 aa9.81□□□□□ -0.84
ATP2A2-210ENST00000550262 VIRMAQ69YN4 1812 aaKnown RBP9.8□□□□□ -0.84
ATP2A2-210ENST00000550262 MAP3K1Q13233 1512 aa9.79□□□□□ -0.84
ATP2A2-210ENST00000550262 SMARCA4P51532 1647 aa9.79□□□□□ -0.84
ATP2A2-210ENST00000550262 ERICH6BQ5W0A0 696 aa9.77□□□□□ -0.85
ATP2A2-210ENST00000550262 CFAP43Q8NDM7 1665 aa9.76□□□□□ -0.85
ATP2A2-210ENST00000550262 DHX57Q6P158 1386 aaKnown RBP9.76□□□□□ -0.85
ATP2A2-210ENST00000550262 SHROOM2Q13796 1616 aa9.75□□□□□ -0.85
ATP2A2-210ENST00000550262 ERICH3Q5RHP9 1530 aa9.75□□□□□ -0.85
ATP2A2-210ENST00000550262 CCDC88BA6NC98 1476 aa9.73□□□□□ -0.85
ATP2A2-210ENST00000550262 CLASP1Q7Z460 1538 aa9.72□□□□□ -0.85
ATP2A2-210ENST00000550262 HNRNPUL2Q1KMD3 747 aaKnown RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms