RNA–Protein interactions for RNA: ENST00000529404.5

FADS3-208, Transcript of fatty acid desaturase 3, humanhuman

TSL 2

Gene FADS3, Length 2,379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FADS3-208ENST00000529404 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.75
FADS3-208ENST00000529404 CCDC180Q9P1Z9 1646 aa27.64■■■□□ 2.02
FADS3-208ENST00000529404 ZCCHC6Q5VYS8 1495 aaKnown RBP27.27■■□□□ 1.96
FADS3-208ENST00000529404 SHROOM4Q9ULL8 1493 aa27.02■■□□□ 1.92
FADS3-208ENST00000529404 DCAF1Q9Y4B6 1507 aa26.62■■□□□ 1.85
FADS3-208ENST00000529404 DCAF8L2P0C7V8 631 aa26.43■■□□□ 1.82
FADS3-208ENST00000529404 SUPT5HO00267 1087 aaKnown RBP26.41■■□□□ 1.82
FADS3-208ENST00000529404 MYO15BQ96JP2 1530 aa25.97■■□□□ 1.75
FADS3-208ENST00000529404 CHIC1Q5VXU3 224 aa25.74■■□□□ 1.71
FADS3-208ENST00000529404 ABCC9O60706 1549 aa25.68■■□□□ 1.7
FADS3-208ENST00000529404 SCRIBQ14160 1630 aa25.64■■□□□ 1.7
FADS3-208ENST00000529404 NACADO15069 1562 aa25.56■■□□□ 1.68
FADS3-208ENST00000529404 RSF1Q96T23 1441 aaPredicted RBP25.4■■□□□ 1.66
FADS3-208ENST00000529404 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.62
FADS3-208ENST00000529404 CECR2Q9BXF3 1484 aa25.07■■□□□ 1.6
FADS3-208ENST00000529404 MROH2BQ7Z745 1585 aa25■■□□□ 1.59
FADS3-208ENST00000529404 WIZO95785 1651 aa24.84■■□□□ 1.57
FADS3-208ENST00000529404 LOC105371045A0A1W2PR82 267 aa24.83■■□□□ 1.57
FADS3-208ENST00000529404 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
FADS3-208ENST00000529404 UNC13AQ9UPW8 1703 aa24.73■■□□□ 1.55
FADS3-208ENST00000529404 TRIM41Q8WV44 630 aa24.72■■□□□ 1.55
FADS3-208ENST00000529404 SMARCA4P51532 1647 aa24.61■■□□□ 1.53
FADS3-208ENST00000529404 PCGF6Q9BYE7 350 aa24.57■■□□□ 1.52
FADS3-208ENST00000529404 HRCP23327 699 aa24.56■■□□□ 1.52
FADS3-208ENST00000529404 TOP2AP11388 1531 aaKnown RBP24.55■■□□□ 1.52
FADS3-208ENST00000529404 EIF4G1Q04637 1599 aaKnown RBP24.55■■□□□ 1.52
FADS3-208ENST00000529404 BICRAQ9NZM4 1560 aa24.46■■□□□ 1.51
FADS3-208ENST00000529404 SMARCA2P51531 1590 aa24.38■■□□□ 1.49
FADS3-208ENST00000529404 CCDC88BA6NC98 1476 aa24.37■■□□□ 1.49
FADS3-208ENST00000529404 FAM9AQ8IZU1 332 aaPredicted RBP24.36■■□□□ 1.49
FADS3-208ENST00000529404 TRIM26Q12899 539 aaPredicted RBP24.3■■□□□ 1.48
FADS3-208ENST00000529404 PABPN1Q86U42 306 aaKnown RBP eCLIP24.27■■□□□ 1.48
FADS3-208ENST00000529404 PEG3Q9GZU2 1588 aa24.25■■□□□ 1.47
FADS3-208ENST00000529404 ABCC8Q09428 1581 aa24.15■■□□□ 1.46
FADS3-208ENST00000529404 EHMT2Q96KQ7 1210 aa24.02■■□□□ 1.44
FADS3-208ENST00000529404 ATAD2BQ9ULI0 1458 aa24.01■■□□□ 1.43
FADS3-208ENST00000529404 PPARGC1BQ86YN6 1023 aaKnown RBP23.92■■□□□ 1.42
FADS3-208ENST00000529404 EEA1Q15075 1411 aa23.91■■□□□ 1.42
FADS3-208ENST00000529404 BAZ1BQ9UIG0 1483 aaKnown RBP23.89■■□□□ 1.42
FADS3-208ENST00000529404 SOGA1O94964 1423 aa23.89■■□□□ 1.41
FADS3-208ENST00000529404 WRNQ14191 1432 aaPredicted RBP eCLIP23.84■■□□□ 1.41
FADS3-208ENST00000529404 RUSC2Q8N2Y8 1516 aa23.77■■□□□ 1.4
FADS3-208ENST00000529404 TNIKQ9UKE5 1360 aa23.77■■□□□ 1.4
FADS3-208ENST00000529404 CSRNP3Q8WYN3 585 aa23.77■■□□□ 1.4
FADS3-208ENST00000529404 SYNJ1O43426 1573 aa23.74■■□□□ 1.39
FADS3-208ENST00000529404 ZEB1P37275 1124 aaPredicted RBP23.73■■□□□ 1.39
FADS3-208ENST00000529404 CEP162Q5TB80 1403 aa23.71■■□□□ 1.39
FADS3-208ENST00000529404 GOLGA3Q08378 1498 aa23.65■■□□□ 1.38
FADS3-208ENST00000529404 HMGXB3Q12766 1538 aa23.64■■□□□ 1.37
FADS3-208ENST00000529404 NCAPD3P42695 1498 aa23.63■■□□□ 1.37
FADS3-208ENST00000529404 KIF21BO75037 1637 aa23.58■■□□□ 1.36
FADS3-208ENST00000529404 CEP164Q9UPV0 1460 aa23.56■■□□□ 1.36
FADS3-208ENST00000529404 TOP2BQ02880 1626 aa23.53■■□□□ 1.36
FADS3-208ENST00000529404 UBTFP17480 764 aaKnown RBP23.53■■□□□ 1.36
FADS3-208ENST00000529404 BIVM-ERCC5R4GMW8 1640 aa23.49■■□□□ 1.35
FADS3-208ENST00000529404 CFTRP13569 1480 aa23.36■■□□□ 1.33
FADS3-208ENST00000529404 RAPGEF2Q9Y4G8 1499 aa23.34■■□□□ 1.33
FADS3-208ENST00000529404 CLIP1P30622 1438 aa23.32■■□□□ 1.32
FADS3-208ENST00000529404 CUX1P39880 1505 aa23.3■■□□□ 1.32
FADS3-208ENST00000529404 ERICH3Q5RHP9 1530 aa23.25■■□□□ 1.31
FADS3-208ENST00000529404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.25■■□□□ 1.31
FADS3-208ENST00000529404 PRXQ9BXM0 1461 aa23.24■■□□□ 1.31
FADS3-208ENST00000529404 VPS8Q8N3P4 1428 aa23.24■■□□□ 1.31
FADS3-208ENST00000529404 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
FADS3-208ENST00000529404 TTBK1Q5TCY1 1321 aaPredicted RBP23.21■■□□□ 1.31
FADS3-208ENST00000529404 CCER1Q8TC90 406 aaPredicted RBP23.2■■□□□ 1.3
FADS3-208ENST00000529404 KIF27Q86VH2 1401 aa23.14■■□□□ 1.3
FADS3-208ENST00000529404 CADPSQ9ULU8 1353 aa23.1■■□□□ 1.29
FADS3-208ENST00000529404 CC2D2AQ9P2K1 1620 aa23.06■■□□□ 1.28
FADS3-208ENST00000529404 ARAP1Q96P48 1450 aa23.02■■□□□ 1.28
FADS3-208ENST00000529404 APLP2Q06481 763 aa22.99■■□□□ 1.27
FADS3-208ENST00000529404 RANGAP1P46060 587 aaPredicted RBP22.94■■□□□ 1.26
FADS3-208ENST00000529404 CUX2O14529 1486 aa22.91■■□□□ 1.26
FADS3-208ENST00000529404 IGF1RP08069 1367 aa22.91■■□□□ 1.26
FADS3-208ENST00000529404 FGD5Q6ZNL6 1462 aa22.9■■□□□ 1.26
FADS3-208ENST00000529404 FANCD2Q9BXW9 1451 aa22.85■■□□□ 1.25
FADS3-208ENST00000529404 ARHGAP35Q9NRY4 1499 aa22.85■■□□□ 1.25
FADS3-208ENST00000529404 HNRNPUL2Q1KMD3 747 aaKnown RBP22.84■■□□□ 1.25
FADS3-208ENST00000529404 CARMIL1Q5VZK9 1371 aa22.78■■□□□ 1.24
FADS3-208ENST00000529404 DNMBPQ6XZF7 1577 aa22.78■■□□□ 1.24
FADS3-208ENST00000529404 PELP1Q8IZL8 1130 aaKnown RBP22.77■■□□□ 1.24
FADS3-208ENST00000529404 KANK4Q5T7N3 995 aaPredicted RBP22.75■■□□□ 1.23
FADS3-208ENST00000529404 TOPBP1Q92547 1522 aa22.71■■□□□ 1.23
FADS3-208ENST00000529404 ABCA10Q8WWZ4 1543 aa22.7■■□□□ 1.22
FADS3-208ENST00000529404 RRBP1Q9P2E9 1410 aaKnown RBP22.7■■□□□ 1.22
FADS3-208ENST00000529404 NESP48681 1621 aa22.68■■□□□ 1.22
FADS3-208ENST00000529404 POLA1P09884 1462 aaPredicted RBP22.67■■□□□ 1.22
FADS3-208ENST00000529404 MAP3K1Q13233 1512 aa22.66■■□□□ 1.22
FADS3-208ENST00000529404 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
FADS3-208ENST00000529404 DIEXFQ68CQ4 756 aaKnown RBP22.65■■□□□ 1.22
FADS3-208ENST00000529404 RAD54L2Q9Y4B4 1467 aa22.65■■□□□ 1.22
FADS3-208ENST00000529404 ZNF316A6NFI3 1004 aaPredicted RBP22.61■■□□□ 1.21
FADS3-208ENST00000529404 TIAM1Q13009 1591 aa22.59■■□□□ 1.21
FADS3-208ENST00000529404 CLSPNQ9HAW4 1339 aa22.57■■□□□ 1.2
FADS3-208ENST00000529404 CUL7Q14999 1698 aa22.57■■□□□ 1.2
FADS3-208ENST00000529404 CCNB3Q8WWL7 1395 aa22.55■■□□□ 1.2
FADS3-208ENST00000529404 URB2Q14146 1524 aaKnown RBP22.55■■□□□ 1.2
FADS3-208ENST00000529404 WDR97A6NE52 1622 aa22.54■■□□□ 1.2
FADS3-208ENST00000529404 DHX57Q6P158 1386 aaKnown RBP22.53■■□□□ 1.2
FADS3-208ENST00000529404 FHAD1B1AJZ9 1412 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms