RNA–Protein interactions for RNA: ENST00000533685.1

SYVN1-215, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-215ENST00000533685 NISCHQ9Y2I1 1504 aa29.22■■■□□ 2.27
SYVN1-215ENST00000533685 CCDC180Q9P1Z9 1646 aa25.79■■□□□ 1.72
SYVN1-215ENST00000533685 ABCC9O60706 1549 aa24.61■■□□□ 1.53
SYVN1-215ENST00000533685 ZCCHC6Q5VYS8 1495 aaKnown RBP24.47■■□□□ 1.51
SYVN1-215ENST00000533685 DCAF1Q9Y4B6 1507 aa24.31■■□□□ 1.48
SYVN1-215ENST00000533685 MYO15BQ96JP2 1530 aa24.27■■□□□ 1.48
SYVN1-215ENST00000533685 NACADO15069 1562 aa24.15■■□□□ 1.46
SYVN1-215ENST00000533685 RB1CC1Q8TDY2 1594 aa24■■□□□ 1.43
SYVN1-215ENST00000533685 DCAF8L2P0C7V8 631 aa24■■□□□ 1.43
SYVN1-215ENST00000533685 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
SYVN1-215ENST00000533685 UNC13AQ9UPW8 1703 aa23.35■■□□□ 1.33
SYVN1-215ENST00000533685 SHROOM4Q9ULL8 1493 aa23.23■■□□□ 1.31
SYVN1-215ENST00000533685 BICRAQ9NZM4 1560 aa23.23■■□□□ 1.31
SYVN1-215ENST00000533685 PABPN1Q86U42 306 aaKnown RBP eCLIP23.04■■□□□ 1.28
SYVN1-215ENST00000533685 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
SYVN1-215ENST00000533685 CECR2Q9BXF3 1484 aa22.62■■□□□ 1.21
SYVN1-215ENST00000533685 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
SYVN1-215ENST00000533685 SMARCA4P51532 1647 aa22.54■■□□□ 1.2
SYVN1-215ENST00000533685 MROH2BQ7Z745 1585 aa22.47■■□□□ 1.19
SYVN1-215ENST00000533685 RSF1Q96T23 1441 aaPredicted RBP22.44■■□□□ 1.18
SYVN1-215ENST00000533685 PEG3Q9GZU2 1588 aa22.41■■□□□ 1.18
SYVN1-215ENST00000533685 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
SYVN1-215ENST00000533685 CC2D2AQ9P2K1 1620 aa22.32■■□□□ 1.16
SYVN1-215ENST00000533685 ATAD2BQ9ULI0 1458 aa22.31■■□□□ 1.16
SYVN1-215ENST00000533685 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
SYVN1-215ENST00000533685 HMGXB3Q12766 1538 aa22.22■■□□□ 1.15
SYVN1-215ENST00000533685 WIZO95785 1651 aa22.2■■□□□ 1.15
SYVN1-215ENST00000533685 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
SYVN1-215ENST00000533685 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
SYVN1-215ENST00000533685 DNAJC5BQ9UF47 199 aa22.1■■□□□ 1.13
SYVN1-215ENST00000533685 SUPT5HO00267 1087 aaKnown RBP22.08■■□□□ 1.13
SYVN1-215ENST00000533685 CCDC88BA6NC98 1476 aa21.79■■□□□ 1.08
SYVN1-215ENST00000533685 CADPSQ9ULU8 1353 aa21.62■■□□□ 1.05
SYVN1-215ENST00000533685 CFTRP13569 1480 aa21.62■■□□□ 1.05
SYVN1-215ENST00000533685 LAMC3Q9Y6N6 1575 aa21.59■■□□□ 1.05
SYVN1-215ENST00000533685 NESP48681 1621 aa21.44■■□□□ 1.02
SYVN1-215ENST00000533685 PDS5BQ9NTI5 1447 aa21.43■■□□□ 1.02
SYVN1-215ENST00000533685 PRDM2Q13029 1718 aa21.42■■□□□ 1.02
SYVN1-215ENST00000533685 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
SYVN1-215ENST00000533685 CEP164Q9UPV0 1460 aa21.28■■□□□ 1
SYVN1-215ENST00000533685 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
SYVN1-215ENST00000533685 KIF21AQ7Z4S6 1674 aa21.19■□□□□ 0.98
SYVN1-215ENST00000533685 ABCC8Q09428 1581 aa21.17■□□□□ 0.98
SYVN1-215ENST00000533685 MRC2Q9UBG0 1479 aa21.15■□□□□ 0.98
SYVN1-215ENST00000533685 WRNQ14191 1432 aaPredicted RBP eCLIP21.15■□□□□ 0.98
SYVN1-215ENST00000533685 DNMBPQ6XZF7 1577 aa21.09■□□□□ 0.97
SYVN1-215ENST00000533685 WDR62O43379 1518 aa21.09■□□□□ 0.97
SYVN1-215ENST00000533685 THOC2Q8NI27 1593 aaKnown RBP21.08■□□□□ 0.97
SYVN1-215ENST00000533685 URB2Q14146 1524 aaKnown RBP21.07■□□□□ 0.96
SYVN1-215ENST00000533685 CUX1P39880 1505 aa21.06■□□□□ 0.96
SYVN1-215ENST00000533685 TOPBP1Q92547 1522 aa21.05■□□□□ 0.96
SYVN1-215ENST00000533685 TOP2BQ02880 1626 aa21.05■□□□□ 0.96
SYVN1-215ENST00000533685 BIVM-ERCC5R4GMW8 1640 aa21.04■□□□□ 0.96
SYVN1-215ENST00000533685 SYNJ1O43426 1573 aa21.01■□□□□ 0.95
SYVN1-215ENST00000533685 CHIC1Q5VXU3 224 aa20.99■□□□□ 0.95
SYVN1-215ENST00000533685 TRIM41Q8WV44 630 aa20.92■□□□□ 0.94
SYVN1-215ENST00000533685 CUX2O14529 1486 aa20.92■□□□□ 0.94
SYVN1-215ENST00000533685 POLA1P09884 1462 aaPredicted RBP20.91■□□□□ 0.94
SYVN1-215ENST00000533685 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
SYVN1-215ENST00000533685 IFT140Q96RY7 1462 aa20.85■□□□□ 0.93
SYVN1-215ENST00000533685 SOGA1O94964 1423 aa20.82■□□□□ 0.92
SYVN1-215ENST00000533685 ABCA10Q8WWZ4 1543 aa20.8■□□□□ 0.92
SYVN1-215ENST00000533685 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
SYVN1-215ENST00000533685 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
SYVN1-215ENST00000533685 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
SYVN1-215ENST00000533685 EEA1Q15075 1411 aa20.69■□□□□ 0.9
SYVN1-215ENST00000533685 KIF27Q86VH2 1401 aa20.69■□□□□ 0.9
SYVN1-215ENST00000533685 ABCA5Q8WWZ7 1642 aa20.64■□□□□ 0.89
SYVN1-215ENST00000533685 ZNF608Q9ULD9 1512 aaPredicted RBP20.61■□□□□ 0.89
SYVN1-215ENST00000533685 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
SYVN1-215ENST00000533685 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
SYVN1-215ENST00000533685 EIF4G3O43432 1585 aaKnown RBP20.58■□□□□ 0.88
SYVN1-215ENST00000533685 ERICH3Q5RHP9 1530 aa20.57■□□□□ 0.88
SYVN1-215ENST00000533685 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
SYVN1-215ENST00000533685 AQRO60306 1485 aaKnown RBP eCLIP20.55■□□□□ 0.886e-23■■■■■ 40.1
SYVN1-215ENST00000533685 RUSC2Q8N2Y8 1516 aa20.52■□□□□ 0.87
SYVN1-215ENST00000533685 IGF1RP08069 1367 aa20.51■□□□□ 0.87
SYVN1-215ENST00000533685 MAGI1Q96QZ7 1491 aaPredicted RBP20.49■□□□□ 0.87
SYVN1-215ENST00000533685 CSRNP3Q8WYN3 585 aa20.47■□□□□ 0.87
SYVN1-215ENST00000533685 PBRM1Q86U86 1689 aa20.47■□□□□ 0.87
SYVN1-215ENST00000533685 CUL7Q14999 1698 aa20.45■□□□□ 0.86
SYVN1-215ENST00000533685 FHAD1B1AJZ9 1412 aa20.43■□□□□ 0.86
SYVN1-215ENST00000533685 PRXQ9BXM0 1461 aa20.43■□□□□ 0.86
SYVN1-215ENST00000533685 SNAPC4Q5SXM2 1469 aa20.41■□□□□ 0.86
SYVN1-215ENST00000533685 ADAMTS12P58397 1594 aa20.4■□□□□ 0.86
SYVN1-215ENST00000533685 CARMIL1Q5VZK9 1371 aa20.4■□□□□ 0.86
SYVN1-215ENST00000533685 SYNJ2O15056 1496 aa20.37■□□□□ 0.85
SYVN1-215ENST00000533685 KIF21BO75037 1637 aa20.36■□□□□ 0.85
SYVN1-215ENST00000533685 FAM9AQ8IZU1 332 aaPredicted RBP20.35■□□□□ 0.85
SYVN1-215ENST00000533685 RAPGEF2Q9Y4G8 1499 aa20.35■□□□□ 0.85
SYVN1-215ENST00000533685 GOLGA3Q08378 1498 aa20.28■□□□□ 0.84
SYVN1-215ENST00000533685 GRIN2AQ12879 1464 aa20.28■□□□□ 0.84
SYVN1-215ENST00000533685 CHMP7Q8WUX9 453 aaPredicted RBP20.26■□□□□ 0.83
SYVN1-215ENST00000533685 NUP160Q12769 1436 aa20.21■□□□□ 0.83
SYVN1-215ENST00000533685 CHD1O14646 1710 aa20.16■□□□□ 0.82
SYVN1-215ENST00000533685 FBLN2P98095 1184 aa20.14■□□□□ 0.81
SYVN1-215ENST00000533685 KIAA0586Q9BVV6 1533 aa20.13■□□□□ 0.81
SYVN1-215ENST00000533685 TNIKQ9UKE5 1360 aa20.13■□□□□ 0.81
SYVN1-215ENST00000533685 CEP170Q5SW79 1584 aa20.12■□□□□ 0.81
SYVN1-215ENST00000533685 UBTFP17480 764 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms