RNA–Protein interactions for RNA: ENST00000439551.1

SMIM30-203, Transcript of small integral membrane protein 30, humanhuman

TSL 2

Gene SMIM30, Length 706 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM30-203ENST00000439551 AEBP2Q6ZN18 517 aaPredicted RBP19.56■□□□□ 0.72
SMIM30-203ENST00000439551 CHIC1Q5VXU3 224 aa18.45■□□□□ 0.54
SMIM30-203ENST00000439551 SENP3Q9H4L4 574 aaPredicted RBP16.71■□□□□ 0.27
SMIM30-203ENST00000439551 PHF23Q9BUL5 403 aaPredicted RBP16.47■□□□□ 0.23
SMIM30-203ENST00000439551 FOXD1Q16676 465 aa15.59■□□□□ 0.09
SMIM30-203ENST00000439551 PLPPR3Q6T4P5 718 aa14.79□□□□□ -0.04
SMIM30-203ENST00000439551 MSH5O43196 834 aa14.64□□□□□ -0.07
SMIM30-203ENST00000439551 PIAS4Q8N2W9 510 aaPredicted RBP14.55□□□□□ -0.08
SMIM30-203ENST00000439551 POTEDQ86YR6 584 aa14.51□□□□□ -0.09
SMIM30-203ENST00000439551 PPP6R1Q9UPN7 881 aa14.47□□□□□ -0.09
SMIM30-203ENST00000439551 ADRA2BP18089 450 aa14.43□□□□□ -0.1
SMIM30-203ENST00000439551 MAPK8IP2Q13387 824 aaPredicted RBP13.29□□□□□ -0.28
SMIM30-203ENST00000439551 DMRT2Q9Y5R5 561 aa13.22□□□□□ -0.29
SMIM30-203ENST00000439551 SCAF1Q9H7N4 1312 aaKnown RBP13.2□□□□□ -0.3
SMIM30-203ENST00000439551 KCNA4P22459 653 aa13.06□□□□□ -0.32
SMIM30-203ENST00000439551 PPP4R3CPQ6ZMV5 832 aa13.02□□□□□ -0.33
SMIM30-203ENST00000439551 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
SMIM30-203ENST00000439551 DCAF8L1A6NGE4 600 aa12.72□□□□□ -0.37
SMIM30-203ENST00000439551 HOXD11P31277 338 aaPredicted RBP12.68□□□□□ -0.38
SMIM30-203ENST00000439551 CACNB1Q02641 598 aaPredicted RBP12.66□□□□□ -0.38
SMIM30-203ENST00000439551 CNKSR2Q8WXI2 1034 aa12.65□□□□□ -0.38
SMIM30-203ENST00000439551 NPM3O75607 178 aaKnown RBP12.58□□□□□ -0.4
SMIM30-203ENST00000439551 RNF216Q9NWF9 866 aaPredicted RBP12.56□□□□□ -0.4
SMIM30-203ENST00000439551 SLC4A1APQ9BWU0 796 aaKnown RBP12.54□□□□□ -0.4
SMIM30-203ENST00000439551 EHMT2Q96KQ7 1210 aa12.51□□□□□ -0.41
SMIM30-203ENST00000439551 RNF39Q9H2S5 420 aa12.47□□□□□ -0.41
SMIM30-203ENST00000439551 C1QBPQ07021 282 aaKnown RBP12.28□□□□□ -0.44
SMIM30-203ENST00000439551 DNAJC5BQ9UF47 199 aa12.26□□□□□ -0.45
SMIM30-203ENST00000439551 CSRNP3Q8WYN3 585 aa12.21□□□□□ -0.45
SMIM30-203ENST00000439551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMIM30-203ENST00000439551 FOXD4L1Q9NU39 408 aa11.99□□□□□ -0.49
SMIM30-203ENST00000439551 ZBTB22O15209 634 aa11.98□□□□□ -0.49
SMIM30-203ENST00000439551 U3KPZ7 1027 aaPredicted RBP11.83□□□□□ -0.52
SMIM30-203ENST00000439551 SLC4A2P04920 1241 aa11.79□□□□□ -0.52
SMIM30-203ENST00000439551 CAPN15O75808 1086 aa11.7□□□□□ -0.54
SMIM30-203ENST00000439551 SPINK5Q9NQ38 1064 aaPredicted RBP11.7□□□□□ -0.54
SMIM30-203ENST00000439551 MYCNP04198 464 aaPredicted RBP11.68□□□□□ -0.54
SMIM30-203ENST00000439551 DSG3P32926 999 aa11.65□□□□□ -0.54
SMIM30-203ENST00000439551 ATXN8OSP0DMR3 200 aa11.58□□□□□ -0.56
SMIM30-203ENST00000439551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.5□□□□□ -0.57
SMIM30-203ENST00000439551 HNRNPUL2Q1KMD3 747 aaKnown RBP11.5□□□□□ -0.57
SMIM30-203ENST00000439551 APLP2Q06481 763 aa11.49□□□□□ -0.57
SMIM30-203ENST00000439551 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
SMIM30-203ENST00000439551 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
SMIM30-203ENST00000439551 SAMD1Q6SPF0 538 aaPredicted RBP11.44□□□□□ -0.58
SMIM30-203ENST00000439551 ABCB7O75027 752 aa11.43□□□□□ -0.58
SMIM30-203ENST00000439551 POTEHQ6S545 545 aa11.35□□□□□ -0.59
SMIM30-203ENST00000439551 ATF5Q9Y2D1 282 aaPredicted RBP11.22□□□□□ -0.61
SMIM30-203ENST00000439551 POLA2Q14181 598 aa11.13□□□□□ -0.63
SMIM30-203ENST00000439551 RBM42Q9BTD8 480 aaKnown RBP11.12□□□□□ -0.63
SMIM30-203ENST00000439551 FKBP8Q14318 412 aa11.05□□□□□ -0.64
SMIM30-203ENST00000439551 CHRDL2Q6WN34 429 aa10.92□□□□□ -0.66
SMIM30-203ENST00000439551 ZBTB12Q9Y330 459 aaPredicted RBP10.89□□□□□ -0.67
SMIM30-203ENST00000439551 FBLN2P98095 1184 aa10.87□□□□□ -0.67
SMIM30-203ENST00000439551 AKT1S1Q96B36 256 aa10.84□□□□□ -0.67
SMIM30-203ENST00000439551 OSCARQ8IYS5 282 aa10.79□□□□□ -0.68
SMIM30-203ENST00000439551 MKRN4PQ13434 485 aaPredicted RBP10.78□□□□□ -0.68
SMIM30-203ENST00000439551 SPDYE4A6NLX3 237 aa10.76□□□□□ -0.69
SMIM30-203ENST00000439551 REM2Q8IYK8 340 aaPredicted RBP10.73□□□□□ -0.69
SMIM30-203ENST00000439551 AMER1Q5JTC6 1135 aaPredicted RBP10.7□□□□□ -0.7
SMIM30-203ENST00000439551 FBXO3Q9UK99 471 aa10.66□□□□□ -0.7
SMIM30-203ENST00000439551 PIP4P2Q8N4L2 257 aa10.64□□□□□ -0.71
SMIM30-203ENST00000439551 PITPNM1O00562 1244 aa10.63□□□□□ -0.71
SMIM30-203ENST00000439551 PROM2Q8N271 834 aa10.61□□□□□ -0.71
SMIM30-203ENST00000439551 RTN4Q9NQC3 1192 aaKnown RBP10.59□□□□□ -0.71
SMIM30-203ENST00000439551 SP7Q8TDD2 431 aaPredicted RBP10.58□□□□□ -0.72
SMIM30-203ENST00000439551 SPDYE2BA6NHP3 402 aa10.55□□□□□ -0.72
SMIM30-203ENST00000439551 SPDYE6P0CI01 402 aa10.55□□□□□ -0.72
SMIM30-203ENST00000439551 FXR2P51116 673 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMIM30-203ENST00000439551 SPDYE2Q495Y8 402 aa10.55□□□□□ -0.72
SMIM30-203ENST00000439551 HAX1O00165 279 aa10.49□□□□□ -0.73
SMIM30-203ENST00000439551 ZNF692Q9BU19 519 aaPredicted RBP10.48□□□□□ -0.73
SMIM30-203ENST00000439551 VASPP50552 380 aaPredicted RBP10.44□□□□□ -0.74
SMIM30-203ENST00000439551 SSUH2Q9Y2M2 353 aa10.43□□□□□ -0.74
SMIM30-203ENST00000439551 CLEC11AQ9Y240 323 aa10.41□□□□□ -0.74
SMIM30-203ENST00000439551 SPDYE1Q8NFV5 336 aaPredicted RBP10.4□□□□□ -0.74
SMIM30-203ENST00000439551 PRKAR2AP13861 404 aaKnown RBP10.35□□□□□ -0.75
SMIM30-203ENST00000439551 STAG3Q9UJ98 1225 aa10.35□□□□□ -0.75
SMIM30-203ENST00000439551 EVX2Q03828 476 aa10.33□□□□□ -0.76
SMIM30-203ENST00000439551 PABPN1Q86U42 306 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMIM30-203ENST00000439551 IFNLR1Q8IU57 520 aaPredicted RBP10.28□□□□□ -0.76
SMIM30-203ENST00000439551 C19orf67A6NJJ6 358 aa10.22□□□□□ -0.77
SMIM30-203ENST00000439551 CHADLQ6NUI6 762 aa10.22□□□□□ -0.77
SMIM30-203ENST00000439551 PLCD3Q8N3E9 789 aa10.21□□□□□ -0.77
SMIM30-203ENST00000439551 PRR29P0C7W0 189 aa10.2□□□□□ -0.78
SMIM30-203ENST00000439551 KLHL34Q8N239 644 aa10.2□□□□□ -0.78
SMIM30-203ENST00000439551 PLEKHG5O94827 1062 aa10.18□□□□□ -0.78
SMIM30-203ENST00000439551 MIER1Q8N108 512 aa10.17□□□□□ -0.78
SMIM30-203ENST00000439551 SPOCK2Q92563 424 aa10.17□□□□□ -0.78
SMIM30-203ENST00000439551 ZBTB47Q9UFB7 747 aaPredicted RBP10.15□□□□□ -0.78
SMIM30-203ENST00000439551 SLC24A1O60721 1099 aa10.14□□□□□ -0.79
SMIM30-203ENST00000439551 GABBR2O75899 941 aa10.1□□□□□ -0.79
SMIM30-203ENST00000439551 PKD2Q13563 968 aa10.06□□□□□ -0.8
SMIM30-203ENST00000439551 FARP1Q9Y4F1 1045 aaPredicted RBP10.03□□□□□ -0.8
SMIM30-203ENST00000439551 CD44P16070 742 aaKnown RBP10.02□□□□□ -0.81
SMIM30-203ENST00000439551 DCAF8L2P0C7V8 631 aa9.99□□□□□ -0.81
SMIM30-203ENST00000439551 ECM2O94769 699 aaPredicted RBP9.98□□□□□ -0.81
SMIM30-203ENST00000439551 TRIM41Q8WV44 630 aa9.94□□□□□ -0.82
SMIM30-203ENST00000439551 CREBZFQ9NS37 354 aa9.94□□□□□ -0.82
SMIM30-203ENST00000439551 CIZ1Q9ULV3 898 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms