RNA–Protein interactions for RNA: ENST00000533738.6

NUCB2-216, Transcript of nucleobindin 2, humanhuman

TSL 1 (best)

Gene NUCB2, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-216ENST00000533738 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
NUCB2-216ENST00000533738 CCDC180Q9P1Z9 1646 aa26.05■■□□□ 1.76
NUCB2-216ENST00000533738 ABCC9O60706 1549 aa25.65■■□□□ 1.7
NUCB2-216ENST00000533738 RB1CC1Q8TDY2 1594 aa24.59■■□□□ 1.53
NUCB2-216ENST00000533738 NACADO15069 1562 aa24.52■■□□□ 1.52
NUCB2-216ENST00000533738 DCAF8L2P0C7V8 631 aa24.45■■□□□ 1.5
NUCB2-216ENST00000533738 ZCCHC6Q5VYS8 1495 aaKnown RBP24.35■■□□□ 1.49
NUCB2-216ENST00000533738 MYO15BQ96JP2 1530 aa24.34■■□□□ 1.49
NUCB2-216ENST00000533738 DCAF1Q9Y4B6 1507 aa24.19■■□□□ 1.46
NUCB2-216ENST00000533738 UNC13AQ9UPW8 1703 aa24.02■■□□□ 1.44
NUCB2-216ENST00000533738 PABPN1Q86U42 306 aaKnown RBP eCLIP23.94■■□□□ 1.42
NUCB2-216ENST00000533738 BICRAQ9NZM4 1560 aa23.88■■□□□ 1.41
NUCB2-216ENST00000533738 SCRIBQ14160 1630 aa23.79■■□□□ 1.4
NUCB2-216ENST00000533738 DNAJC5BQ9UF47 199 aa23.68■■□□□ 1.38
NUCB2-216ENST00000533738 SHROOM4Q9ULL8 1493 aa23.6■■□□□ 1.37
NUCB2-216ENST00000533738 EIF4G1Q04637 1599 aaKnown RBP23.25■■□□□ 1.31
NUCB2-216ENST00000533738 CC2D2AQ9P2K1 1620 aa23.19■■□□□ 1.3
NUCB2-216ENST00000533738 CECR2Q9BXF3 1484 aa23.06■■□□□ 1.28
NUCB2-216ENST00000533738 SMARCA4P51532 1647 aa22.73■■□□□ 1.23
NUCB2-216ENST00000533738 BAZ1AQ9NRL2 1556 aaPredicted RBP22.67■■□□□ 1.22
NUCB2-216ENST00000533738 NCAPD3P42695 1498 aa22.64■■□□□ 1.21
NUCB2-216ENST00000533738 ATAD2BQ9ULI0 1458 aa22.64■■□□□ 1.21
NUCB2-216ENST00000533738 SMARCA2P51531 1590 aa22.59■■□□□ 1.21
NUCB2-216ENST00000533738 AEBP2Q6ZN18 517 aaPredicted RBP22.56■■□□□ 1.2
NUCB2-216ENST00000533738 MROH2BQ7Z745 1585 aa22.55■■□□□ 1.2
NUCB2-216ENST00000533738 HMGXB3Q12766 1538 aa22.52■■□□□ 1.2
NUCB2-216ENST00000533738 PEG3Q9GZU2 1588 aa22.51■■□□□ 1.19
NUCB2-216ENST00000533738 BAZ1BQ9UIG0 1483 aaKnown RBP22.44■■□□□ 1.18
NUCB2-216ENST00000533738 WIZO95785 1651 aa22.29■■□□□ 1.16
NUCB2-216ENST00000533738 RSF1Q96T23 1441 aaPredicted RBP22.23■■□□□ 1.15
NUCB2-216ENST00000533738 NESP48681 1621 aa22.17■■□□□ 1.14
NUCB2-216ENST00000533738 ERCC6Q03468 1493 aa22.1■■□□□ 1.13
NUCB2-216ENST00000533738 LAMC3Q9Y6N6 1575 aa22.06■■□□□ 1.12
NUCB2-216ENST00000533738 TOP2AP11388 1531 aaKnown RBP22.06■■□□□ 1.12
NUCB2-216ENST00000533738 CADPSQ9ULU8 1353 aa21.97■■□□□ 1.11
NUCB2-216ENST00000533738 CUX2O14529 1486 aa21.93■■□□□ 1.1
NUCB2-216ENST00000533738 PDS5BQ9NTI5 1447 aa21.91■■□□□ 1.1
NUCB2-216ENST00000533738 KIF21AQ7Z4S6 1674 aa21.88■■□□□ 1.09
NUCB2-216ENST00000533738 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
NUCB2-216ENST00000533738 CFTRP13569 1480 aa21.82■■□□□ 1.08
NUCB2-216ENST00000533738 CCDC88BA6NC98 1476 aa21.79■■□□□ 1.08
NUCB2-216ENST00000533738 FANCD2Q9BXW9 1451 aa21.73■■□□□ 1.07
NUCB2-216ENST00000533738 MRC2Q9UBG0 1479 aa21.72■■□□□ 1.07
NUCB2-216ENST00000533738 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
NUCB2-216ENST00000533738 WDR62O43379 1518 aa21.66■■□□□ 1.06
NUCB2-216ENST00000533738 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
NUCB2-216ENST00000533738 PRDM2Q13029 1718 aa21.6■■□□□ 1.05
NUCB2-216ENST00000533738 SUPT5HO00267 1087 aaKnown RBP21.54■■□□□ 1.04
NUCB2-216ENST00000533738 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
NUCB2-216ENST00000533738 DNAJC5Q9H3Z4 198 aa21.4■■□□□ 1.02
NUCB2-216ENST00000533738 TOPBP1Q92547 1522 aa21.37■■□□□ 1.01
NUCB2-216ENST00000533738 DNMBPQ6XZF7 1577 aa21.33■■□□□ 1.01
NUCB2-216ENST00000533738 ABCC8Q09428 1581 aa21.31■■□□□ 1
NUCB2-216ENST00000533738 IFT140Q96RY7 1462 aa21.26■□□□□ 0.99
NUCB2-216ENST00000533738 ZNF608Q9ULD9 1512 aaPredicted RBP21.2■□□□□ 0.98
NUCB2-216ENST00000533738 POLA1P09884 1462 aaPredicted RBP21.19■□□□□ 0.98
NUCB2-216ENST00000533738 CUX1P39880 1505 aa21.17■□□□□ 0.98
NUCB2-216ENST00000533738 TARBP1Q13395 1621 aaKnown RBP21.15■□□□□ 0.98
NUCB2-216ENST00000533738 FGD5Q6ZNL6 1462 aa21.11■□□□□ 0.97
NUCB2-216ENST00000533738 EIF4G3O43432 1585 aaKnown RBP21.1■□□□□ 0.97
NUCB2-216ENST00000533738 RAD54L2Q9Y4B4 1467 aa21.1■□□□□ 0.97
NUCB2-216ENST00000533738 SOGA1O94964 1423 aa21.07■□□□□ 0.96
NUCB2-216ENST00000533738 AQRO60306 1485 aaKnown RBP eCLIP21.05■□□□□ 0.96
NUCB2-216ENST00000533738 TDRD9Q8NDG6 1382 aaKnown RBP20.98■□□□□ 0.95
NUCB2-216ENST00000533738 WRNQ14191 1432 aaPredicted RBP eCLIP20.95■□□□□ 0.95
NUCB2-216ENST00000533738 OSCARQ8IYS5 282 aa20.95■□□□□ 0.94
NUCB2-216ENST00000533738 WDR97A6NE52 1622 aa20.95■□□□□ 0.94
NUCB2-216ENST00000533738 SYNJ1O43426 1573 aa20.94■□□□□ 0.94
NUCB2-216ENST00000533738 TOP2BQ02880 1626 aa20.93■□□□□ 0.94
NUCB2-216ENST00000533738 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
NUCB2-216ENST00000533738 ABCA10Q8WWZ4 1543 aa20.89■□□□□ 0.94
NUCB2-216ENST00000533738 SNAPC4Q5SXM2 1469 aa20.86■□□□□ 0.93
NUCB2-216ENST00000533738 GRIN2BQ13224 1484 aa20.85■□□□□ 0.93
NUCB2-216ENST00000533738 CHD1O14646 1710 aa20.84■□□□□ 0.93
NUCB2-216ENST00000533738 GAPVD1Q14C86 1478 aa20.83■□□□□ 0.93
NUCB2-216ENST00000533738 ABCA5Q8WWZ7 1642 aa20.83■□□□□ 0.93
NUCB2-216ENST00000533738 MAGI1Q96QZ7 1491 aaPredicted RBP20.81■□□□□ 0.92
NUCB2-216ENST00000533738 PBRM1Q86U86 1689 aa20.8■□□□□ 0.92
NUCB2-216ENST00000533738 FBLN2P98095 1184 aa20.79■□□□□ 0.92
NUCB2-216ENST00000533738 SYNJ2O15056 1496 aa20.74■□□□□ 0.91
NUCB2-216ENST00000533738 CHMP7Q8WUX9 453 aaPredicted RBP20.71■□□□□ 0.91
NUCB2-216ENST00000533738 RIMBP3CA6NJZ7 1639 aa20.68■□□□□ 0.9
NUCB2-216ENST00000533738 RIMBP3BA6NNM3 1639 aa20.68■□□□□ 0.9
NUCB2-216ENST00000533738 RIMBP3Q9UFD9 1639 aa20.68■□□□□ 0.9
NUCB2-216ENST00000533738 ARHGEF11O15085 1522 aa20.67■□□□□ 0.9
NUCB2-216ENST00000533738 ADAMTS12P58397 1594 aa20.65■□□□□ 0.9
NUCB2-216ENST00000533738 CLASP1Q7Z460 1538 aa20.65■□□□□ 0.9
NUCB2-216ENST00000533738 TRIM41Q8WV44 630 aa20.65■□□□□ 0.9
NUCB2-216ENST00000533738 ERICH3Q5RHP9 1530 aa20.63■□□□□ 0.89
NUCB2-216ENST00000533738 GRIN2AQ12879 1464 aa20.59■□□□□ 0.89
NUCB2-216ENST00000533738 FHAD1B1AJZ9 1412 aa20.59■□□□□ 0.89
NUCB2-216ENST00000533738 KIF27Q86VH2 1401 aa20.52■□□□□ 0.87
NUCB2-216ENST00000533738 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
NUCB2-216ENST00000533738 NUP160Q12769 1436 aa20.51■□□□□ 0.87
NUCB2-216ENST00000533738 ARAP1Q96P48 1450 aa20.5■□□□□ 0.87
NUCB2-216ENST00000533738 IGF1RP08069 1367 aa20.46■□□□□ 0.87
NUCB2-216ENST00000533738 CYB5RLQ6IPT4 315 aa20.44■□□□□ 0.86
NUCB2-216ENST00000533738 CUL7Q14999 1698 aa20.41■□□□□ 0.86
NUCB2-216ENST00000533738 SHROOM2Q13796 1616 aa20.37■□□□□ 0.85
NUCB2-216ENST00000533738 ERCC6L2Q5T890 1561 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms