RNA–Protein interactions for RNA: ENST00000458064.6

NUCB2-202, Transcript of nucleobindin 2, humanhuman

TSL 1 (best) BASIC

Gene NUCB2, Length 1,279 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-202ENST00000458064 AEBP2Q6ZN18 517 aaPredicted RBP32.18■■■□□ 2.74
NUCB2-202ENST00000458064 CHIC1Q5VXU3 224 aa30.84■■■□□ 2.53
NUCB2-202ENST00000458064 SENP3Q9H4L4 574 aaPredicted RBP27.32■■□□□ 1.96
NUCB2-202ENST00000458064 PHF23Q9BUL5 403 aaPredicted RBP27.1■■□□□ 1.93
NUCB2-202ENST00000458064 FOXD1Q16676 465 aa25.47■■□□□ 1.67
NUCB2-202ENST00000458064 PLPPR3Q6T4P5 718 aa24.77■■□□□ 1.56
NUCB2-202ENST00000458064 PPP6R1Q9UPN7 881 aa24.1■■□□□ 1.45
NUCB2-202ENST00000458064 ADRA2BP18089 450 aa24.02■■□□□ 1.44
NUCB2-202ENST00000458064 PIAS4Q8N2W9 510 aaPredicted RBP23.85■■□□□ 1.41
NUCB2-202ENST00000458064 MSH5O43196 834 aa23.66■■□□□ 1.38
NUCB2-202ENST00000458064 POTEDQ86YR6 584 aa22.56■■□□□ 1.2
NUCB2-202ENST00000458064 MAPK8IP2Q13387 824 aaPredicted RBP21.97■■□□□ 1.11
NUCB2-202ENST00000458064 SCAF1Q9H7N4 1312 aaKnown RBP21.91■■□□□ 1.1
NUCB2-202ENST00000458064 PPP4R3CPQ6ZMV5 832 aa21.78■■□□□ 1.08
NUCB2-202ENST00000458064 DMRT2Q9Y5R5 561 aa21.74■■□□□ 1.07
NUCB2-202ENST00000458064 CNKSR2Q8WXI2 1034 aa21.27■■□□□ 1
NUCB2-202ENST00000458064 EHMT2Q96KQ7 1210 aa21.16■□□□□ 0.98
NUCB2-202ENST00000458064 KCNA4P22459 653 aa21.15■□□□□ 0.98
NUCB2-202ENST00000458064 HOXD11P31277 338 aaPredicted RBP21.09■□□□□ 0.97
NUCB2-202ENST00000458064 RNF216Q9NWF9 866 aaPredicted RBP21■□□□□ 0.95
NUCB2-202ENST00000458064 NCBP3Q53F19 620 aaKnown RBP20.99■□□□□ 0.95
NUCB2-202ENST00000458064 DCAF8L1A6NGE4 600 aa20.79■□□□□ 0.92
NUCB2-202ENST00000458064 NPM3O75607 178 aaKnown RBP20.75■□□□□ 0.91
NUCB2-202ENST00000458064 SLC4A1APQ9BWU0 796 aaKnown RBP20.42■□□□□ 0.86
NUCB2-202ENST00000458064 CSRNP3Q8WYN3 585 aa20.27■□□□□ 0.84
NUCB2-202ENST00000458064 DNAJC5BQ9UF47 199 aa20.27■□□□□ 0.84
NUCB2-202ENST00000458064 RNF39Q9H2S5 420 aa20.25■□□□□ 0.83
NUCB2-202ENST00000458064 CACNB1Q02641 598 aaPredicted RBP20.1■□□□□ 0.81
NUCB2-202ENST00000458064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.04■□□□□ 0.85e-7■■■■□ 25.9
NUCB2-202ENST00000458064 C1QBPQ07021 282 aaKnown RBP19.94■□□□□ 0.78
NUCB2-202ENST00000458064 SLC4A2P04920 1241 aa19.75■□□□□ 0.75
NUCB2-202ENST00000458064 U3KPZ7 1027 aaPredicted RBP19.71■□□□□ 0.75
NUCB2-202ENST00000458064 ZBTB22O15209 634 aa19.41■□□□□ 0.7
NUCB2-202ENST00000458064 SPINK5Q9NQ38 1064 aaPredicted RBP19.33■□□□□ 0.68
NUCB2-202ENST00000458064 CAPN15O75808 1086 aa19.23■□□□□ 0.67
NUCB2-202ENST00000458064 FOXD4L1Q9NU39 408 aa19.2■□□□□ 0.66
NUCB2-202ENST00000458064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.19■□□□□ 0.66
NUCB2-202ENST00000458064 HNRNPUL2Q1KMD3 747 aaKnown RBP19.19■□□□□ 0.66
NUCB2-202ENST00000458064 MYCNP04198 464 aaPredicted RBP19.15■□□□□ 0.66
NUCB2-202ENST00000458064 SAMD1Q6SPF0 538 aaPredicted RBP19.12■□□□□ 0.65
NUCB2-202ENST00000458064 APLP2Q06481 763 aa19.11■□□□□ 0.65
NUCB2-202ENST00000458064 DSG3P32926 999 aa19.08■□□□□ 0.64
NUCB2-202ENST00000458064 TRHP20396 242 aaPredicted RBP19.01■□□□□ 0.63
NUCB2-202ENST00000458064 ZNF219Q9P2Y4 722 aaPredicted RBP18.98■□□□□ 0.63
NUCB2-202ENST00000458064 ABCB7O75027 752 aa18.85■□□□□ 0.61
NUCB2-202ENST00000458064 SLC24A1O60721 1099 aa18.78■□□□□ 0.6
NUCB2-202ENST00000458064 AMER1Q5JTC6 1135 aaPredicted RBP18.75■□□□□ 0.59
NUCB2-202ENST00000458064 ATF5Q9Y2D1 282 aaPredicted RBP18.75■□□□□ 0.59
NUCB2-202ENST00000458064 RTN4Q9NQC3 1192 aaKnown RBP18.66■□□□□ 0.58
NUCB2-202ENST00000458064 POLA2Q14181 598 aa18.59■□□□□ 0.57
NUCB2-202ENST00000458064 ATXN8OSP0DMR3 200 aa18.52■□□□□ 0.56
NUCB2-202ENST00000458064 FKBP8Q14318 412 aa18.36■□□□□ 0.53
NUCB2-202ENST00000458064 ZBTB12Q9Y330 459 aaPredicted RBP18.2■□□□□ 0.5
NUCB2-202ENST00000458064 RBM42Q9BTD8 480 aaKnown RBP18.14■□□□□ 0.49
NUCB2-202ENST00000458064 OSCARQ8IYS5 282 aa17.99■□□□□ 0.47
NUCB2-202ENST00000458064 FBLN2P98095 1184 aa17.9■□□□□ 0.46
NUCB2-202ENST00000458064 MKRN4PQ13434 485 aaPredicted RBP17.89■□□□□ 0.45
NUCB2-202ENST00000458064 AKT1S1Q96B36 256 aa17.82■□□□□ 0.44
NUCB2-202ENST00000458064 POTEHQ6S545 545 aa17.73■□□□□ 0.43
NUCB2-202ENST00000458064 SPDYE2BA6NHP3 402 aa17.7■□□□□ 0.42
NUCB2-202ENST00000458064 SPDYE6P0CI01 402 aa17.7■□□□□ 0.42
NUCB2-202ENST00000458064 SPDYE2Q495Y8 402 aa17.7■□□□□ 0.42
NUCB2-202ENST00000458064 REM2Q8IYK8 340 aaPredicted RBP17.67■□□□□ 0.42
NUCB2-202ENST00000458064 CHRDL2Q6WN34 429 aa17.64■□□□□ 0.41
NUCB2-202ENST00000458064 ZNF692Q9BU19 519 aaPredicted RBP17.53■□□□□ 0.4
NUCB2-202ENST00000458064 SSUH2Q9Y2M2 353 aa17.53■□□□□ 0.4
NUCB2-202ENST00000458064 PITPNM1O00562 1244 aa17.49■□□□□ 0.39
NUCB2-202ENST00000458064 FBXO3Q9UK99 471 aa17.45■□□□□ 0.38
NUCB2-202ENST00000458064 PIP4P2Q8N4L2 257 aa17.31■□□□□ 0.36
NUCB2-202ENST00000458064 PABPN1Q86U42 306 aaKnown RBP eCLIP17.3■□□□□ 0.36
NUCB2-202ENST00000458064 SPDYE1Q8NFV5 336 aaPredicted RBP17.29■□□□□ 0.36
NUCB2-202ENST00000458064 FXR2P51116 673 aaKnown RBP eCLIP17.27■□□□□ 0.361e-6■■■■■ 30.4
NUCB2-202ENST00000458064 SPDYE4A6NLX3 237 aa17.26■□□□□ 0.35
NUCB2-202ENST00000458064 CLEC11AQ9Y240 323 aa17.25■□□□□ 0.35
NUCB2-202ENST00000458064 PLCB2Q00722 1185 aa17.22■□□□□ 0.35
NUCB2-202ENST00000458064 VASPP50552 380 aaPredicted RBP17.12■□□□□ 0.33
NUCB2-202ENST00000458064 DCAF8L2P0C7V8 631 aa17.11■□□□□ 0.33
NUCB2-202ENST00000458064 HAP1P54257 671 aaPredicted RBP17.06■□□□□ 0.32
NUCB2-202ENST00000458064 PRKAR2AP13861 404 aaKnown RBP17.02■□□□□ 0.32
NUCB2-202ENST00000458064 PRR29P0C7W0 189 aa17.01■□□□□ 0.31
NUCB2-202ENST00000458064 PROM2Q8N271 834 aa17.01■□□□□ 0.31
NUCB2-202ENST00000458064 CHADLQ6NUI6 762 aa16.93■□□□□ 0.3
NUCB2-202ENST00000458064 IFNLR1Q8IU57 520 aaPredicted RBP16.9■□□□□ 0.3
NUCB2-202ENST00000458064 BCANQ96GW7 911 aa16.88■□□□□ 0.29
NUCB2-202ENST00000458064 HAX1O00165 279 aa16.87■□□□□ 0.29
NUCB2-202ENST00000458064 STAG3Q9UJ98 1225 aa16.86■□□□□ 0.29
NUCB2-202ENST00000458064 EVX2Q03828 476 aa16.77■□□□□ 0.28
NUCB2-202ENST00000458064 VSIG10Q8N0Z9 540 aa16.77■□□□□ 0.28
NUCB2-202ENST00000458064 SP7Q8TDD2 431 aaPredicted RBP16.77■□□□□ 0.28
NUCB2-202ENST00000458064 PKD2Q13563 968 aa16.76■□□□□ 0.27
NUCB2-202ENST00000458064 CREBZFQ9NS37 354 aa16.71■□□□□ 0.27
NUCB2-202ENST00000458064 C19orf67A6NJJ6 358 aa16.7■□□□□ 0.26
NUCB2-202ENST00000458064 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.7■□□□□ 0.26
NUCB2-202ENST00000458064 FARP1Q9Y4F1 1045 aaPredicted RBP16.69■□□□□ 0.26
NUCB2-202ENST00000458064 KLHL34Q8N239 644 aa16.66■□□□□ 0.26
NUCB2-202ENST00000458064 SPOCK2Q92563 424 aa16.61■□□□□ 0.25
NUCB2-202ENST00000458064 BBXQ8WY36 941 aaPredicted RBP16.59■□□□□ 0.25
NUCB2-202ENST00000458064 TAOK2Q9UL54 1235 aa16.59■□□□□ 0.25
NUCB2-202ENST00000458064 ECM2O94769 699 aaPredicted RBP16.57■□□□□ 0.24
NUCB2-202ENST00000458064 PRKCSHP14314 528 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms