RNA–Protein interactions for RNA: ENST00000491642.5

SUCLG1-209, Transcript of succinate-CoA ligase alpha subunit, humanhuman

TSL 3

Gene SUCLG1, Length 717 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-209ENST00000491642 AEBP2Q6ZN18 517 aaPredicted RBP13.3□□□□□ -0.28
SUCLG1-209ENST00000491642 CHIC1Q5VXU3 224 aa12.45□□□□□ -0.42
SUCLG1-209ENST00000491642 POTEDQ86YR6 584 aa11.61□□□□□ -0.55
SUCLG1-209ENST00000491642 SENP3Q9H4L4 574 aaPredicted RBP11.41□□□□□ -0.58
SUCLG1-209ENST00000491642 DNAJC5BQ9UF47 199 aa11.3□□□□□ -0.6
SUCLG1-209ENST00000491642 ABCC9O60706 1549 aa11.26□□□□□ -0.61
SUCLG1-209ENST00000491642 NISCHQ9Y2I1 1504 aa11.25□□□□□ -0.61
SUCLG1-209ENST00000491642 PHF23Q9BUL5 403 aaPredicted RBP11.22□□□□□ -0.61
SUCLG1-209ENST00000491642 DNAJC5Q9H3Z4 198 aa10.74□□□□□ -0.69
SUCLG1-209ENST00000491642 FOXD1Q16676 465 aa10.65□□□□□ -0.7
SUCLG1-209ENST00000491642 PABPN1Q86U42 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
SUCLG1-209ENST00000491642 CCDC180Q9P1Z9 1646 aa10.32□□□□□ -0.76
SUCLG1-209ENST00000491642 RB1CC1Q8TDY2 1594 aa10.21□□□□□ -0.78
SUCLG1-209ENST00000491642 CECR2Q9BXF3 1484 aa10.14□□□□□ -0.79
SUCLG1-209ENST00000491642 TRIM41Q8WV44 630 aa10.11□□□□□ -0.79
SUCLG1-209ENST00000491642 MSH5O43196 834 aa10.1□□□□□ -0.79
SUCLG1-209ENST00000491642 UNC13AQ9UPW8 1703 aa10.09□□□□□ -0.79
SUCLG1-209ENST00000491642 CC2D2AQ9P2K1 1620 aa10.07□□□□□ -0.8
SUCLG1-209ENST00000491642 BICRAQ9NZM4 1560 aa10.06□□□□□ -0.8
SUCLG1-209ENST00000491642 DCAF8L2P0C7V8 631 aa9.98□□□□□ -0.81
SUCLG1-209ENST00000491642 NACADO15069 1562 aa9.92□□□□□ -0.82
SUCLG1-209ENST00000491642 PIAS4Q8N2W9 510 aaPredicted RBP9.86□□□□□ -0.83
SUCLG1-209ENST00000491642 EIF4G1Q04637 1599 aaKnown RBP9.83□□□□□ -0.84
SUCLG1-209ENST00000491642 CUX2O14529 1486 aa9.81□□□□□ -0.84
SUCLG1-209ENST00000491642 PLPPR3Q6T4P5 718 aa9.79□□□□□ -0.84
SUCLG1-209ENST00000491642 PPP6R1Q9UPN7 881 aa9.75□□□□□ -0.85
SUCLG1-209ENST00000491642 ERCC6Q03468 1493 aa9.69□□□□□ -0.86
SUCLG1-209ENST00000491642 ADRA2BP18089 450 aa9.68□□□□□ -0.86
SUCLG1-209ENST00000491642 SHROOM4Q9ULL8 1493 aa9.58□□□□□ -0.88
SUCLG1-209ENST00000491642 SCRIBQ14160 1630 aa9.56□□□□□ -0.88
SUCLG1-209ENST00000491642 NESP48681 1621 aa9.5□□□□□ -0.89
SUCLG1-209ENST00000491642 MYO15BQ96JP2 1530 aa9.46□□□□□ -0.9
SUCLG1-209ENST00000491642 THOC2Q8NI27 1593 aaKnown RBP9.44□□□□□ -0.9
SUCLG1-209ENST00000491642 ILDR1Q86SU0 546 aaPredicted RBP9.42□□□□□ -0.9
SUCLG1-209ENST00000491642 SMARCA2P51531 1590 aa9.39□□□□□ -0.91
SUCLG1-209ENST00000491642 TRHP20396 242 aaPredicted RBP9.38□□□□□ -0.91
SUCLG1-209ENST00000491642 RIMBP3CA6NJZ7 1639 aa9.34□□□□□ -0.91
SUCLG1-209ENST00000491642 RIMBP3BA6NNM3 1639 aa9.34□□□□□ -0.91
SUCLG1-209ENST00000491642 RIMBP3Q9UFD9 1639 aa9.34□□□□□ -0.91
SUCLG1-209ENST00000491642 BAZ1AQ9NRL2 1556 aaPredicted RBP9.33□□□□□ -0.92
SUCLG1-209ENST00000491642 OSCARQ8IYS5 282 aa9.29□□□□□ -0.92
SUCLG1-209ENST00000491642 KIF21AQ7Z4S6 1674 aa9.28□□□□□ -0.92
SUCLG1-209ENST00000491642 CYB5RLQ6IPT4 315 aa9.24□□□□□ -0.93
SUCLG1-209ENST00000491642 NCAPD3P42695 1498 aa9.21□□□□□ -0.94
SUCLG1-209ENST00000491642 ARHGEF11O15085 1522 aa9.21□□□□□ -0.94
SUCLG1-209ENST00000491642 ZCCHC6Q5VYS8 1495 aaKnown RBP9.16□□□□□ -0.94
SUCLG1-209ENST00000491642 ATAD2BQ9ULI0 1458 aa9.15□□□□□ -0.95
SUCLG1-209ENST00000491642 DCAF1Q9Y4B6 1507 aa9.1□□□□□ -0.95
SUCLG1-209ENST00000491642 ARAP1Q96P48 1450 aa9.1□□□□□ -0.95
SUCLG1-209ENST00000491642 MRC2Q9UBG0 1479 aa9.1□□□□□ -0.95
SUCLG1-209ENST00000491642 LAMC3Q9Y6N6 1575 aa9.1□□□□□ -0.95
SUCLG1-209ENST00000491642 WDR62O43379 1518 aa9.1□□□□□ -0.95
SUCLG1-209ENST00000491642 PDS5BQ9NTI5 1447 aa9.07□□□□□ -0.96
SUCLG1-209ENST00000491642 HMGXB3Q12766 1538 aa9.05□□□□□ -0.96
SUCLG1-209ENST00000491642 DMRT2Q9Y5R5 561 aa9.01□□□□□ -0.97
SUCLG1-209ENST00000491642 BAZ1BQ9UIG0 1483 aaKnown RBP9.01□□□□□ -0.97
SUCLG1-209ENST00000491642 CACNB1Q02641 598 aaPredicted RBP8.97□□□□□ -0.97
SUCLG1-209ENST00000491642 MAPK8IP2Q13387 824 aaPredicted RBP8.97□□□□□ -0.97
SUCLG1-209ENST00000491642 SMARCA4P51532 1647 aa8.95□□□□□ -0.98
SUCLG1-209ENST00000491642 ZNF608Q9ULD9 1512 aaPredicted RBP8.95□□□□□ -0.98
SUCLG1-209ENST00000491642 KDM4FA0A1W2PPD8 638 aa8.93□□□□□ -0.98
SUCLG1-209ENST00000491642 CADPSQ9ULU8 1353 aa8.92□□□□□ -0.98
SUCLG1-209ENST00000491642 SCAF1Q9H7N4 1312 aaKnown RBP8.92□□□□□ -0.98
SUCLG1-209ENST00000491642 CEP164Q9UPV0 1460 aa8.91□□□□□ -0.98
SUCLG1-209ENST00000491642 URB2Q14146 1524 aaKnown RBP8.9□□□□□ -0.99
SUCLG1-209ENST00000491642 CHD1O14646 1710 aa8.88□□□□□ -0.99
SUCLG1-209ENST00000491642 FANCD2Q9BXW9 1451 aa8.87□□□□□ -0.99
SUCLG1-209ENST00000491642 FBLN2P98095 1184 aa8.86□□□□□ -0.99
SUCLG1-209ENST00000491642 POTEHQ6S545 545 aa8.84□□□□□ -0.99
SUCLG1-209ENST00000491642 ILDR2Q71H61 639 aa8.84□□□□□ -0.99
SUCLG1-209ENST00000491642 LMTK3Q96Q04 1460 aa8.83□□□□□ -1
SUCLG1-209ENST00000491642 RSF1Q96T23 1441 aaPredicted RBP8.8□□□□□ -1
SUCLG1-209ENST00000491642 EIF4G3O43432 1585 aaKnown RBP8.79□□□□□ -1
SUCLG1-209ENST00000491642 PEG3Q9GZU2 1588 aa8.78□□□□□ -1
SUCLG1-209ENST00000491642 HECW2Q9P2P5 1572 aa8.77□□□□□ -1.01
SUCLG1-209ENST00000491642 FBXO41Q8TF61 875 aa8.76□□□□□ -1.01
SUCLG1-209ENST00000491642 MROH2BQ7Z745 1585 aa8.76□□□□□ -1.01
SUCLG1-209ENST00000491642 AQRO60306 1485 aaKnown RBP eCLIP8.76□□□□□ -1.01
SUCLG1-209ENST00000491642 SOCS7O14512 581 aa8.74□□□□□ -1.01
SUCLG1-209ENST00000491642 IFT140Q96RY7 1462 aa8.73□□□□□ -1.01
SUCLG1-209ENST00000491642 CLASP1Q7Z460 1538 aa8.72□□□□□ -1.01
SUCLG1-209ENST00000491642 ERCC6L2Q5T890 1561 aa8.71□□□□□ -1.02
SUCLG1-209ENST00000491642 KIF13AQ9H1H9 1805 aa8.7□□□□□ -1.02
SUCLG1-209ENST00000491642 GAPVD1Q14C86 1478 aa8.7□□□□□ -1.02
SUCLG1-209ENST00000491642 CFTRP13569 1480 aa8.66□□□□□ -1.02
SUCLG1-209ENST00000491642 SYNJ2O15056 1496 aa8.65□□□□□ -1.02
SUCLG1-209ENST00000491642 DISP3Q9P2K9 1392 aa8.65□□□□□ -1.02
SUCLG1-209ENST00000491642 ADGRL1O94910 1474 aa8.64□□□□□ -1.03
SUCLG1-209ENST00000491642 TOPBP1Q92547 1522 aa8.63□□□□□ -1.03
SUCLG1-209ENST00000491642 WIZO95785 1651 aa8.62□□□□□ -1.03
SUCLG1-209ENST00000491642 SNAPC4Q5SXM2 1469 aa8.61□□□□□ -1.03
SUCLG1-209ENST00000491642 HOXD11P31277 338 aaPredicted RBP8.6□□□□□ -1.03
SUCLG1-209ENST00000491642 KDM6BO15054 1643 aa8.6□□□□□ -1.03
SUCLG1-209ENST00000491642 TARBP1Q13395 1621 aaKnown RBP8.6□□□□□ -1.03
SUCLG1-209ENST00000491642 TDRD9Q8NDG6 1382 aaKnown RBP8.6□□□□□ -1.03
SUCLG1-209ENST00000491642 FAM69CQ0P6D2 419 aa8.59□□□□□ -1.03
SUCLG1-209ENST00000491642 RNF39Q9H2S5 420 aa8.59□□□□□ -1.03
SUCLG1-209ENST00000491642 SYNJ1O43426 1573 aa8.58□□□□□ -1.04
SUCLG1-209ENST00000491642 DCAF8L1A6NGE4 600 aa8.57□□□□□ -1.04
SUCLG1-209ENST00000491642 CHMP7Q8WUX9 453 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms