RNA–Protein interactions for RNA: ENST00000526120.5

NUCB2-204, Transcript of nucleobindin 2, humanhuman

TSL 1 (best)

Gene NUCB2, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-204ENST00000526120 AEBP2Q6ZN18 517 aaPredicted RBP25.9■■□□□ 1.74
NUCB2-204ENST00000526120 CHIC1Q5VXU3 224 aa24.15■■□□□ 1.46
NUCB2-204ENST00000526120 SENP3Q9H4L4 574 aaPredicted RBP21.84■■□□□ 1.09
NUCB2-204ENST00000526120 PHF23Q9BUL5 403 aaPredicted RBP21.62■■□□□ 1.05
NUCB2-204ENST00000526120 FOXD1Q16676 465 aa20.58■□□□□ 0.89
NUCB2-204ENST00000526120 POTEDQ86YR6 584 aa19.39■□□□□ 0.69
NUCB2-204ENST00000526120 MSH5O43196 834 aa19.15■□□□□ 0.66
NUCB2-204ENST00000526120 PPP6R1Q9UPN7 881 aa19.11■□□□□ 0.65
NUCB2-204ENST00000526120 PLPPR3Q6T4P5 718 aa19.02■□□□□ 0.64
NUCB2-204ENST00000526120 PIAS4Q8N2W9 510 aaPredicted RBP19■□□□□ 0.63
NUCB2-204ENST00000526120 ADRA2BP18089 450 aa18.93■□□□□ 0.62
NUCB2-204ENST00000526120 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
NUCB2-204ENST00000526120 DMRT2Q9Y5R5 561 aa17.37■□□□□ 0.37
NUCB2-204ENST00000526120 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
NUCB2-204ENST00000526120 PPP4R3CPQ6ZMV5 832 aa16.72■□□□□ 0.27
NUCB2-204ENST00000526120 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
NUCB2-204ENST00000526120 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
NUCB2-204ENST00000526120 DCAF8L1A6NGE4 600 aa16.47■□□□□ 0.23
NUCB2-204ENST00000526120 RNF39Q9H2S5 420 aa16.47■□□□□ 0.23
NUCB2-204ENST00000526120 CNKSR2Q8WXI2 1034 aa16.41■□□□□ 0.22
NUCB2-204ENST00000526120 RNF216Q9NWF9 866 aaPredicted RBP16.36■□□□□ 0.21
NUCB2-204ENST00000526120 C1QBPQ07021 282 aaKnown RBP16.08■□□□□ 0.16
NUCB2-204ENST00000526120 DNAJC5BQ9UF47 199 aa16.06■□□□□ 0.16
NUCB2-204ENST00000526120 NPM3O75607 178 aaKnown RBP15.81■□□□□ 0.12
NUCB2-204ENST00000526120 NCBP3Q53F19 620 aaKnown RBP15.77■□□□□ 0.12
NUCB2-204ENST00000526120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.66■□□□□ 0.11e-6■■□□□ 12.2
NUCB2-204ENST00000526120 U3KPZ7 1027 aaPredicted RBP15.52■□□□□ 0.08
NUCB2-204ENST00000526120 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
NUCB2-204ENST00000526120 DSG3P32926 999 aa15.32■□□□□ 0.04
NUCB2-204ENST00000526120 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
NUCB2-204ENST00000526120 KCNA4P22459 653 aa15.27■□□□□ 0.04
NUCB2-204ENST00000526120 CAPN15O75808 1086 aa15.17■□□□□ 0.02
NUCB2-204ENST00000526120 POTEHQ6S545 545 aa15.05■□□□□ -0
NUCB2-204ENST00000526120 ABCB7O75027 752 aa14.9□□□□□ -0.02
NUCB2-204ENST00000526120 TRHP20396 242 aaPredicted RBP14.88□□□□□ -0.03
NUCB2-204ENST00000526120 ZNF219Q9P2Y4 722 aaPredicted RBP14.79□□□□□ -0.04
NUCB2-204ENST00000526120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
NUCB2-204ENST00000526120 APLP2Q06481 763 aa14.66□□□□□ -0.06
NUCB2-204ENST00000526120 HNRNPUL2Q1KMD3 747 aaKnown RBP14.66□□□□□ -0.06
NUCB2-204ENST00000526120 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
NUCB2-204ENST00000526120 MYCNP04198 464 aaPredicted RBP14.49□□□□□ -0.09
NUCB2-204ENST00000526120 POLA2Q14181 598 aa14.47□□□□□ -0.09
NUCB2-204ENST00000526120 ATF5Q9Y2D1 282 aaPredicted RBP14.43□□□□□ -0.1
NUCB2-204ENST00000526120 RBM42Q9BTD8 480 aaKnown RBP14.4□□□□□ -0.1
NUCB2-204ENST00000526120 CHRDL2Q6WN34 429 aa14.34□□□□□ -0.11
NUCB2-204ENST00000526120 EHMT2Q96KQ7 1210 aa14.3□□□□□ -0.12
NUCB2-204ENST00000526120 FOXD4L1Q9NU39 408 aa14.22□□□□□ -0.13
NUCB2-204ENST00000526120 SLC4A1APQ9BWU0 796 aaKnown RBP14.21□□□□□ -0.13
NUCB2-204ENST00000526120 ZBTB22O15209 634 aa14.17□□□□□ -0.14
NUCB2-204ENST00000526120 AKT1S1Q96B36 256 aa14.1□□□□□ -0.15
NUCB2-204ENST00000526120 OSCARQ8IYS5 282 aa14.07□□□□□ -0.16
NUCB2-204ENST00000526120 REM2Q8IYK8 340 aaPredicted RBP14.04□□□□□ -0.16
NUCB2-204ENST00000526120 PIP4P2Q8N4L2 257 aa14.01□□□□□ -0.17
NUCB2-204ENST00000526120 ZBTB12Q9Y330 459 aaPredicted RBP13.98□□□□□ -0.17
NUCB2-204ENST00000526120 SP7Q8TDD2 431 aaPredicted RBP13.96□□□□□ -0.17
NUCB2-204ENST00000526120 PITPNM1O00562 1244 aa13.93□□□□□ -0.18
NUCB2-204ENST00000526120 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
NUCB2-204ENST00000526120 FXR2P51116 673 aaKnown RBP eCLIP13.89□□□□□ -0.19
NUCB2-204ENST00000526120 EVX2Q03828 476 aa13.79□□□□□ -0.2
NUCB2-204ENST00000526120 ATXN8OSP0DMR3 200 aa13.77□□□□□ -0.21
NUCB2-204ENST00000526120 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
NUCB2-204ENST00000526120 HAX1O00165 279 aa13.67□□□□□ -0.22
NUCB2-204ENST00000526120 SPDYE2BA6NHP3 402 aa13.64□□□□□ -0.23
NUCB2-204ENST00000526120 SPDYE6P0CI01 402 aa13.64□□□□□ -0.23
NUCB2-204ENST00000526120 SPDYE2Q495Y8 402 aa13.64□□□□□ -0.23
NUCB2-204ENST00000526120 SSUH2Q9Y2M2 353 aa13.56□□□□□ -0.24
NUCB2-204ENST00000526120 FBLN2P98095 1184 aa13.52□□□□□ -0.25
NUCB2-204ENST00000526120 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
NUCB2-204ENST00000526120 C19orf67A6NJJ6 358 aa13.45□□□□□ -0.26
NUCB2-204ENST00000526120 SPDYE1Q8NFV5 336 aaPredicted RBP13.43□□□□□ -0.26
NUCB2-204ENST00000526120 CLEC11AQ9Y240 323 aa13.41□□□□□ -0.26
NUCB2-204ENST00000526120 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
NUCB2-204ENST00000526120 CHADLQ6NUI6 762 aa13.35□□□□□ -0.27
NUCB2-204ENST00000526120 GABBR2O75899 941 aa13.3□□□□□ -0.28
NUCB2-204ENST00000526120 PABPN1Q86U42 306 aaKnown RBP eCLIP13.25□□□□□ -0.29
NUCB2-204ENST00000526120 POTEIP0CG38 1075 aa13.17□□□□□ -0.3
NUCB2-204ENST00000526120 PRR29P0C7W0 189 aa13.15□□□□□ -0.3
NUCB2-204ENST00000526120 LHX8Q68G74 356 aa13.07□□□□□ -0.32
NUCB2-204ENST00000526120 FARP1Q9Y4F1 1045 aaPredicted RBP13.06□□□□□ -0.32
NUCB2-204ENST00000526120 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
NUCB2-204ENST00000526120 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
NUCB2-204ENST00000526120 ZNF579Q8NAF0 562 aaKnown RBP12.87□□□□□ -0.35
NUCB2-204ENST00000526120 GALR2O43603 387 aaPredicted RBP12.79□□□□□ -0.36
NUCB2-204ENST00000526120 MNX1P50219 401 aaPredicted RBP12.78□□□□□ -0.36
NUCB2-204ENST00000526120 ZRANB1Q9UGI0 708 aa12.78□□□□□ -0.36
NUCB2-204ENST00000526120 CLCN6P51797 869 aa12.76□□□□□ -0.37
NUCB2-204ENST00000526120 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
NUCB2-204ENST00000526120 SPDYE4A6NLX3 237 aa12.72□□□□□ -0.37
NUCB2-204ENST00000526120 PHF12Q96QT6 1004 aa12.69□□□□□ -0.38
NUCB2-204ENST00000526120 DCBLD2Q96PD2 775 aa12.68□□□□□ -0.38
NUCB2-204ENST00000526120 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
NUCB2-204ENST00000526120 PELP1Q8IZL8 1130 aaKnown RBP12.65□□□□□ -0.38
NUCB2-204ENST00000526120 OTUD5Q96G74 571 aa12.65□□□□□ -0.38
NUCB2-204ENST00000526120 RTN4Q9NQC3 1192 aaKnown RBP12.59□□□□□ -0.39
NUCB2-204ENST00000526120 AMER1Q5JTC6 1135 aaPredicted RBP12.58□□□□□ -0.4
NUCB2-204ENST00000526120 PROM2Q8N271 834 aa12.57□□□□□ -0.4
NUCB2-204ENST00000526120 POTEJP0CG39 1038 aa12.54□□□□□ -0.4
NUCB2-204ENST00000526120 MS4A3Q96HJ5 214 aa12.51□□□□□ -0.41
NUCB2-204ENST00000526120 FKBP8Q14318 412 aa12.48□□□□□ -0.41
NUCB2-204ENST00000526120 ASTLQ6HA08 431 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 234 ms