RNA–Protein interactions for RNA: ENST00000622082.4

NUCB2-220, Transcript of nucleobindin 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NUCB2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-220ENST00000622082 CHIC1Q5VXU3 224 aa27.7■■■□□ 2.02
NUCB2-220ENST00000622082 AEBP2Q6ZN18 517 aaPredicted RBP27.66■■■□□ 2.02
NUCB2-220ENST00000622082 PHF23Q9BUL5 403 aaPredicted RBP24.4■■□□□ 1.5
NUCB2-220ENST00000622082 SENP3Q9H4L4 574 aaPredicted RBP23.43■■□□□ 1.34
NUCB2-220ENST00000622082 PLPPR3Q6T4P5 718 aa22.82■■□□□ 1.24
NUCB2-220ENST00000622082 FOXD1Q16676 465 aa21.62■■□□□ 1.05
NUCB2-220ENST00000622082 ADRA2BP18089 450 aa21.36■■□□□ 1.01
NUCB2-220ENST00000622082 PPP6R1Q9UPN7 881 aa21.31■■□□□ 1
NUCB2-220ENST00000622082 PIAS4Q8N2W9 510 aaPredicted RBP20.59■□□□□ 0.89
NUCB2-220ENST00000622082 KCNA4P22459 653 aa20.42■□□□□ 0.86
NUCB2-220ENST00000622082 PPP4R3CPQ6ZMV5 832 aa20.18■□□□□ 0.82
NUCB2-220ENST00000622082 NCBP3Q53F19 620 aaKnown RBP19.88■□□□□ 0.77
NUCB2-220ENST00000622082 EHMT2Q96KQ7 1210 aa19.77■□□□□ 0.76
NUCB2-220ENST00000622082 MSH5O43196 834 aa19.73■□□□□ 0.75
NUCB2-220ENST00000622082 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
NUCB2-220ENST00000622082 SLC4A1APQ9BWU0 796 aaKnown RBP19.6■□□□□ 0.73
NUCB2-220ENST00000622082 NPM3O75607 178 aaKnown RBP19.52■□□□□ 0.72
NUCB2-220ENST00000622082 CNKSR2Q8WXI2 1034 aa19.47■□□□□ 0.71
NUCB2-220ENST00000622082 CSRNP3Q8WYN3 585 aa19.24■□□□□ 0.67
NUCB2-220ENST00000622082 MAPK8IP2Q13387 824 aaPredicted RBP19.18■□□□□ 0.66
NUCB2-220ENST00000622082 RNF216Q9NWF9 866 aaPredicted RBP18.93■□□□□ 0.62
NUCB2-220ENST00000622082 DNAJC5BQ9UF47 199 aa18.85■□□□□ 0.61
NUCB2-220ENST00000622082 DMRT2Q9Y5R5 561 aa18.8■□□□□ 0.6
NUCB2-220ENST00000622082 ZBTB22O15209 634 aa18.76■□□□□ 0.59
NUCB2-220ENST00000622082 HOXD11P31277 338 aaPredicted RBP18.66■□□□□ 0.58
NUCB2-220ENST00000622082 FOXD4L1Q9NU39 408 aa18.64■□□□□ 0.57
NUCB2-220ENST00000622082 SLC4A2P04920 1241 aa18.26■□□□□ 0.51
NUCB2-220ENST00000622082 MYCNP04198 464 aaPredicted RBP18.05■□□□□ 0.48
NUCB2-220ENST00000622082 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
NUCB2-220ENST00000622082 DCAF8L1A6NGE4 600 aa17.99■□□□□ 0.47
NUCB2-220ENST00000622082 ATXN8OSP0DMR3 200 aa17.94■□□□□ 0.46
NUCB2-220ENST00000622082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.83■□□□□ 0.455e-7■■■■□ 25.9
NUCB2-220ENST00000622082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.65■□□□□ 0.42
NUCB2-220ENST00000622082 HNRNPUL2Q1KMD3 747 aaKnown RBP17.65■□□□□ 0.42
NUCB2-220ENST00000622082 SAMD1Q6SPF0 538 aaPredicted RBP17.59■□□□□ 0.41
NUCB2-220ENST00000622082 U3KPZ7 1027 aaPredicted RBP17.55■□□□□ 0.4
NUCB2-220ENST00000622082 ATF5Q9Y2D1 282 aaPredicted RBP17.46■□□□□ 0.39
NUCB2-220ENST00000622082 FKBP8Q14318 412 aa17.38■□□□□ 0.37
NUCB2-220ENST00000622082 APLP2Q06481 763 aa17.31■□□□□ 0.36
NUCB2-220ENST00000622082 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
NUCB2-220ENST00000622082 AMER1Q5JTC6 1135 aaPredicted RBP17.01■□□□□ 0.31
NUCB2-220ENST00000622082 RNF39Q9H2S5 420 aa16.94■□□□□ 0.3
NUCB2-220ENST00000622082 RTN4Q9NQC3 1192 aaKnown RBP16.93■□□□□ 0.3
NUCB2-220ENST00000622082 TRHP20396 242 aaPredicted RBP16.9■□□□□ 0.3
NUCB2-220ENST00000622082 SPINK5Q9NQ38 1064 aaPredicted RBP16.88■□□□□ 0.29
NUCB2-220ENST00000622082 CAPN15O75808 1086 aa16.82■□□□□ 0.28
NUCB2-220ENST00000622082 C1QBPQ07021 282 aaKnown RBP16.82■□□□□ 0.28
NUCB2-220ENST00000622082 FBLN2P98095 1184 aa16.78■□□□□ 0.28
NUCB2-220ENST00000622082 POLA2Q14181 598 aa16.77■□□□□ 0.27
NUCB2-220ENST00000622082 SPDYE4A6NLX3 237 aa16.75■□□□□ 0.27
NUCB2-220ENST00000622082 MKRN4PQ13434 485 aaPredicted RBP16.75■□□□□ 0.27
NUCB2-220ENST00000622082 FBXO3Q9UK99 471 aa16.63■□□□□ 0.25
NUCB2-220ENST00000622082 ZBTB12Q9Y330 459 aaPredicted RBP16.57■□□□□ 0.24
NUCB2-220ENST00000622082 ABCB7O75027 752 aa16.52■□□□□ 0.24
NUCB2-220ENST00000622082 PROM2Q8N271 834 aa16.51■□□□□ 0.23
NUCB2-220ENST00000622082 SLC24A1O60721 1099 aa16.39■□□□□ 0.21
NUCB2-220ENST00000622082 DSG3P32926 999 aa16.36■□□□□ 0.21
NUCB2-220ENST00000622082 VASPP50552 380 aaPredicted RBP16.33■□□□□ 0.2
NUCB2-220ENST00000622082 ZNF692Q9BU19 519 aaPredicted RBP16.21■□□□□ 0.19
NUCB2-220ENST00000622082 SPDYE2BA6NHP3 402 aa16.15■□□□□ 0.18
NUCB2-220ENST00000622082 SPDYE6P0CI01 402 aa16.15■□□□□ 0.18
NUCB2-220ENST00000622082 SPDYE2Q495Y8 402 aa16.15■□□□□ 0.18
NUCB2-220ENST00000622082 IFNLR1Q8IU57 520 aaPredicted RBP16.14■□□□□ 0.17
NUCB2-220ENST00000622082 OSCARQ8IYS5 282 aa16.13■□□□□ 0.17
NUCB2-220ENST00000622082 CACNB1Q02641 598 aaPredicted RBP16.07■□□□□ 0.16
NUCB2-220ENST00000622082 SSUH2Q9Y2M2 353 aa16.06■□□□□ 0.16
NUCB2-220ENST00000622082 STAG3Q9UJ98 1225 aa16.04■□□□□ 0.16
NUCB2-220ENST00000622082 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.15
NUCB2-220ENST00000622082 KLHL34Q8N239 644 aa15.96■□□□□ 0.15
NUCB2-220ENST00000622082 PLCD3Q8N3E9 789 aa15.89■□□□□ 0.13
NUCB2-220ENST00000622082 SPOCK2Q92563 424 aa15.89■□□□□ 0.13
NUCB2-220ENST00000622082 PKD2Q13563 968 aa15.85■□□□□ 0.13
NUCB2-220ENST00000622082 MIER1Q8N108 512 aa15.84■□□□□ 0.13
NUCB2-220ENST00000622082 DCAF8L2P0C7V8 631 aa15.83■□□□□ 0.12
NUCB2-220ENST00000622082 PLEKHG5O94827 1062 aa15.75■□□□□ 0.11
NUCB2-220ENST00000622082 PLCB2Q00722 1185 aa15.69■□□□□ 0.1
NUCB2-220ENST00000622082 ZBTB47Q9UFB7 747 aaPredicted RBP15.69■□□□□ 0.1
NUCB2-220ENST00000622082 ECM2O94769 699 aaPredicted RBP15.67■□□□□ 0.1
NUCB2-220ENST00000622082 RBM42Q9BTD8 480 aaKnown RBP15.62■□□□□ 0.09
NUCB2-220ENST00000622082 AKT1S1Q96B36 256 aa15.55■□□□□ 0.08
NUCB2-220ENST00000622082 SPDYE1Q8NFV5 336 aaPredicted RBP15.54■□□□□ 0.08
NUCB2-220ENST00000622082 CIZ1Q9ULV3 898 aaPredicted RBP15.54■□□□□ 0.08
NUCB2-220ENST00000622082 HAP1P54257 671 aaPredicted RBP15.49■□□□□ 0.07
NUCB2-220ENST00000622082 RGL2O15211 777 aa15.47■□□□□ 0.07
NUCB2-220ENST00000622082 BBXQ8WY36 941 aaPredicted RBP15.46■□□□□ 0.07
NUCB2-220ENST00000622082 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.46■□□□□ 0.07
NUCB2-220ENST00000622082 TRIM41Q8WV44 630 aa15.43■□□□□ 0.06
NUCB2-220ENST00000622082 CLEC11AQ9Y240 323 aa15.43■□□□□ 0.06
NUCB2-220ENST00000622082 PRR29P0C7W0 189 aa15.4■□□□□ 0.06
NUCB2-220ENST00000622082 NPM1P06748 294 aaKnown RBP eCLIP15.38■□□□□ 0.05
NUCB2-220ENST00000622082 REM2Q8IYK8 340 aaPredicted RBP15.38■□□□□ 0.05
NUCB2-220ENST00000622082 GSE1Q14687 1217 aa15.37■□□□□ 0.05
NUCB2-220ENST00000622082 NUBP1P53384 320 aa15.31■□□□□ 0.04
NUCB2-220ENST00000622082 PAXIP1Q6ZW49 1069 aaPredicted RBP15.3■□□□□ 0.04
NUCB2-220ENST00000622082 CREBZFQ9NS37 354 aa15.3■□□□□ 0.04
NUCB2-220ENST00000622082 DCAF8Q5TAQ9 597 aa15.29■□□□□ 0.04
NUCB2-220ENST00000622082 CHGAP10645 457 aaKnown RBP15.27■□□□□ 0.04
NUCB2-220ENST00000622082 VSIG10Q8N0Z9 540 aa15.27■□□□□ 0.04
NUCB2-220ENST00000622082 CFAP44Q96MT7 982 aa15.27■□□□□ 0.04
NUCB2-220ENST00000622082 SPRYD3Q8NCJ5 442 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms