RNA–Protein interactions for RNA: ENST00000468581.1

SLC33A1-204, Transcript of solute carrier family 33 member 1, humanhuman

TSL 3

Gene SLC33A1, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1-204ENST00000468581 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
SLC33A1-204ENST00000468581 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
SLC33A1-204ENST00000468581 SENP3Q9H4L4 574 aaPredicted RBP19.84■□□□□ 0.77
SLC33A1-204ENST00000468581 PHF23Q9BUL5 403 aaPredicted RBP19.56■□□□□ 0.72
SLC33A1-204ENST00000468581 FOXD1Q16676 465 aa18.36■□□□□ 0.53
SLC33A1-204ENST00000468581 PLPPR3Q6T4P5 718 aa18.05■□□□□ 0.48
SLC33A1-204ENST00000468581 PPP6R1Q9UPN7 881 aa17.33■□□□□ 0.36
SLC33A1-204ENST00000468581 ADRA2BP18089 450 aa17.3■□□□□ 0.36
SLC33A1-204ENST00000468581 PIAS4Q8N2W9 510 aaPredicted RBP17.26■□□□□ 0.35
SLC33A1-204ENST00000468581 MSH5O43196 834 aa17.2■□□□□ 0.34
SLC33A1-204ENST00000468581 POTEDQ86YR6 584 aa16.18■□□□□ 0.18
SLC33A1-204ENST00000468581 SCAF1Q9H7N4 1312 aaKnown RBP16.02■□□□□ 0.16
SLC33A1-204ENST00000468581 PPP4R3CPQ6ZMV5 832 aa15.8■□□□□ 0.12
SLC33A1-204ENST00000468581 MAPK8IP2Q13387 824 aaPredicted RBP15.78■□□□□ 0.12
SLC33A1-204ENST00000468581 DMRT2Q9Y5R5 561 aa15.75■□□□□ 0.11
SLC33A1-204ENST00000468581 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
SLC33A1-204ENST00000468581 NCBP3Q53F19 620 aaKnown RBP15.38■□□□□ 0.05
SLC33A1-204ENST00000468581 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
SLC33A1-204ENST00000468581 RNF216Q9NWF9 866 aaPredicted RBP15.28■□□□□ 0.04
SLC33A1-204ENST00000468581 DCAF8L1A6NGE4 600 aa15.04■□□□□ -0
SLC33A1-204ENST00000468581 NPM3O75607 178 aaKnown RBP15.04■□□□□ -0
SLC33A1-204ENST00000468581 KCNA4P22459 653 aa14.96□□□□□ -0.01
SLC33A1-204ENST00000468581 DNAJC5BQ9UF47 199 aa14.83□□□□□ -0.04
SLC33A1-204ENST00000468581 RNF39Q9H2S5 420 aa14.63□□□□□ -0.07
SLC33A1-204ENST00000468581 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.56□□□□□ -0.08
SLC33A1-204ENST00000468581 CACNB1Q02641 598 aaPredicted RBP14.52□□□□□ -0.09
SLC33A1-204ENST00000468581 C1QBPQ07021 282 aaKnown RBP14.5□□□□□ -0.09
SLC33A1-204ENST00000468581 SLC4A2P04920 1241 aa14.26□□□□□ -0.13
SLC33A1-204ENST00000468581 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
SLC33A1-204ENST00000468581 U3KPZ7 1027 aaPredicted RBP14.25□□□□□ -0.13
SLC33A1-204ENST00000468581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.09□□□□□ -0.15
SLC33A1-204ENST00000468581 HNRNPUL2Q1KMD3 747 aaKnown RBP14.09□□□□□ -0.15
SLC33A1-204ENST00000468581 APLP2Q06481 763 aa14.07□□□□□ -0.16
SLC33A1-204ENST00000468581 MYCNP04198 464 aaPredicted RBP13.98□□□□□ -0.17
SLC33A1-204ENST00000468581 SAMD1Q6SPF0 538 aaPredicted RBP13.98□□□□□ -0.17
SLC33A1-204ENST00000468581 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
SLC33A1-204ENST00000468581 CAPN15O75808 1086 aa13.94□□□□□ -0.18
SLC33A1-204ENST00000468581 SPINK5Q9NQ38 1064 aaPredicted RBP13.91□□□□□ -0.18
SLC33A1-204ENST00000468581 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
SLC33A1-204ENST00000468581 DSG3P32926 999 aa13.78□□□□□ -0.2
SLC33A1-204ENST00000468581 TRHP20396 242 aaPredicted RBP13.76□□□□□ -0.21
SLC33A1-204ENST00000468581 ZBTB22O15209 634 aa13.72□□□□□ -0.21
SLC33A1-204ENST00000468581 ABCB7O75027 752 aa13.58□□□□□ -0.24
SLC33A1-204ENST00000468581 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
SLC33A1-204ENST00000468581 ATF5Q9Y2D1 282 aaPredicted RBP13.48□□□□□ -0.25
SLC33A1-204ENST00000468581 POLA2Q14181 598 aa13.47□□□□□ -0.25
SLC33A1-204ENST00000468581 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
SLC33A1-204ENST00000468581 ZBTB12Q9Y330 459 aaPredicted RBP13.36□□□□□ -0.27
SLC33A1-204ENST00000468581 EHMT2Q96KQ7 1210 aa13.35□□□□□ -0.27
SLC33A1-204ENST00000468581 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
SLC33A1-204ENST00000468581 FBLN2P98095 1184 aa13.1□□□□□ -0.31
SLC33A1-204ENST00000468581 OSCARQ8IYS5 282 aa13.01□□□□□ -0.33
SLC33A1-204ENST00000468581 AKT1S1Q96B36 256 aa12.98□□□□□ -0.33
SLC33A1-204ENST00000468581 SPDYE2BA6NHP3 402 aa12.92□□□□□ -0.34
SLC33A1-204ENST00000468581 SPDYE6P0CI01 402 aa12.92□□□□□ -0.34
SLC33A1-204ENST00000468581 SPDYE2Q495Y8 402 aa12.92□□□□□ -0.34
SLC33A1-204ENST00000468581 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
SLC33A1-204ENST00000468581 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
SLC33A1-204ENST00000468581 POTEHQ6S545 545 aa12.77□□□□□ -0.37
SLC33A1-204ENST00000468581 CHRDL2Q6WN34 429 aa12.76□□□□□ -0.37
SLC33A1-204ENST00000468581 ZNF692Q9BU19 519 aaPredicted RBP12.76□□□□□ -0.37
SLC33A1-204ENST00000468581 SSUH2Q9Y2M2 353 aa12.74□□□□□ -0.37
SLC33A1-204ENST00000468581 PITPNM1O00562 1244 aa12.63□□□□□ -0.39
SLC33A1-204ENST00000468581 SPDYE1Q8NFV5 336 aaPredicted RBP12.61□□□□□ -0.39
SLC33A1-204ENST00000468581 PABPN1Q86U42 306 aaKnown RBP eCLIP12.56□□□□□ -0.4
SLC33A1-204ENST00000468581 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
SLC33A1-204ENST00000468581 CLEC11AQ9Y240 323 aa12.51□□□□□ -0.41
SLC33A1-204ENST00000468581 FXR2P51116 673 aaKnown RBP eCLIP12.5□□□□□ -0.41
SLC33A1-204ENST00000468581 PIP4P2Q8N4L2 257 aa12.49□□□□□ -0.41
SLC33A1-204ENST00000468581 STAG3Q9UJ98 1225 aa12.4□□□□□ -0.42
SLC33A1-204ENST00000468581 PRR29P0C7W0 189 aa12.38□□□□□ -0.43
SLC33A1-204ENST00000468581 PRKAR2AP13861 404 aaKnown RBP12.33□□□□□ -0.44
SLC33A1-204ENST00000468581 PROM2Q8N271 834 aa12.28□□□□□ -0.44
SLC33A1-204ENST00000468581 HAX1O00165 279 aa12.21□□□□□ -0.45
SLC33A1-204ENST00000468581 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
SLC33A1-204ENST00000468581 FKBP8Q14318 412 aa12.15□□□□□ -0.46
SLC33A1-204ENST00000468581 SP7Q8TDD2 431 aaPredicted RBP12.12□□□□□ -0.47
SLC33A1-204ENST00000468581 FARP1Q9Y4F1 1045 aaPredicted RBP12.11□□□□□ -0.47
SLC33A1-204ENST00000468581 CREBZFQ9NS37 354 aa12.1□□□□□ -0.47
SLC33A1-204ENST00000468581 C19orf67A6NJJ6 358 aa12.09□□□□□ -0.47
SLC33A1-204ENST00000468581 PLEKHG5O94827 1062 aa11.99□□□□□ -0.49
SLC33A1-204ENST00000468581 NPM1P06748 294 aaKnown RBP eCLIP11.99□□□□□ -0.49
SLC33A1-204ENST00000468581 EVX2Q03828 476 aa11.97□□□□□ -0.49
SLC33A1-204ENST00000468581 CD44P16070 742 aaKnown RBP11.96□□□□□ -0.49
SLC33A1-204ENST00000468581 FBXO3Q9UK99 471 aa11.94□□□□□ -0.5
SLC33A1-204ENST00000468581 MNX1P50219 401 aaPredicted RBP11.92□□□□□ -0.5
SLC33A1-204ENST00000468581 CLCN6P51797 869 aa11.91□□□□□ -0.5
SLC33A1-204ENST00000468581 MIER1Q8N108 512 aa11.91□□□□□ -0.5
SLC33A1-204ENST00000468581 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
SLC33A1-204ENST00000468581 PLCD3Q8N3E9 789 aa11.87□□□□□ -0.51
SLC33A1-204ENST00000468581 ZBTB47Q9UFB7 747 aaPredicted RBP11.86□□□□□ -0.51
SLC33A1-204ENST00000468581 ZRANB1Q9UGI0 708 aa11.83□□□□□ -0.52
SLC33A1-204ENST00000468581 ZNF579Q8NAF0 562 aaKnown RBP11.82□□□□□ -0.52
SLC33A1-204ENST00000468581 GABBR2O75899 941 aa11.81□□□□□ -0.52
SLC33A1-204ENST00000468581 VASPP50552 380 aaPredicted RBP11.7□□□□□ -0.54
SLC33A1-204ENST00000468581 TSPYL2Q9H2G4 693 aaPredicted RBP11.66□□□□□ -0.54
SLC33A1-204ENST00000468581 PHF12Q96QT6 1004 aa11.64□□□□□ -0.55
SLC33A1-204ENST00000468581 RASEFQ8IZ41 740 aa11.63□□□□□ -0.55
SLC33A1-204ENST00000468581 CCDC61Q9Y6R9 512 aa11.63□□□□□ -0.55
SLC33A1-204ENST00000468581 NUBP1P53384 320 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms