RNA–Protein interactions for RNA: ENST00000413744.1

SMIM30-202, Transcript of small integral membrane protein 30, humanhuman

TSL 2

Gene SMIM30, Length 818 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM30-202ENST00000413744 AEBP2Q6ZN18 517 aaPredicted RBP16.55■□□□□ 0.24
SMIM30-202ENST00000413744 CHIC1Q5VXU3 224 aa15.54■□□□□ 0.08
SMIM30-202ENST00000413744 SENP3Q9H4L4 574 aaPredicted RBP14.23□□□□□ -0.13
SMIM30-202ENST00000413744 PHF23Q9BUL5 403 aaPredicted RBP13.98□□□□□ -0.17
SMIM30-202ENST00000413744 FOXD1Q16676 465 aa13.28□□□□□ -0.28
SMIM30-202ENST00000413744 POTEDQ86YR6 584 aa12.94□□□□□ -0.34
SMIM30-202ENST00000413744 MSH5O43196 834 aa12.61□□□□□ -0.39
SMIM30-202ENST00000413744 PIAS4Q8N2W9 510 aaPredicted RBP12.41□□□□□ -0.42
SMIM30-202ENST00000413744 PLPPR3Q6T4P5 718 aa12.14□□□□□ -0.47
SMIM30-202ENST00000413744 PPP6R1Q9UPN7 881 aa12.12□□□□□ -0.47
SMIM30-202ENST00000413744 ADRA2BP18089 450 aa12.11□□□□□ -0.47
SMIM30-202ENST00000413744 MAPK8IP2Q13387 824 aaPredicted RBP11.22□□□□□ -0.61
SMIM30-202ENST00000413744 DMRT2Q9Y5R5 561 aa11.18□□□□□ -0.62
SMIM30-202ENST00000413744 CACNB1Q02641 598 aaPredicted RBP11.12□□□□□ -0.63
SMIM30-202ENST00000413744 SCAF1Q9H7N4 1312 aaKnown RBP11.09□□□□□ -0.63
SMIM30-202ENST00000413744 DCAF8L1A6NGE4 600 aa10.94□□□□□ -0.66
SMIM30-202ENST00000413744 RNF39Q9H2S5 420 aa10.68□□□□□ -0.7
SMIM30-202ENST00000413744 HOXD11P31277 338 aaPredicted RBP10.6□□□□□ -0.71
SMIM30-202ENST00000413744 PPP4R3CPQ6ZMV5 832 aa10.59□□□□□ -0.71
SMIM30-202ENST00000413744 C1QBPQ07021 282 aaKnown RBP10.52□□□□□ -0.73
SMIM30-202ENST00000413744 CNKSR2Q8WXI2 1034 aa10.47□□□□□ -0.73
SMIM30-202ENST00000413744 RNF216Q9NWF9 866 aaPredicted RBP10.45□□□□□ -0.74
SMIM30-202ENST00000413744 DNAJC5BQ9UF47 199 aa10.24□□□□□ -0.77
SMIM30-202ENST00000413744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMIM30-202ENST00000413744 NCBP3Q53F19 620 aaKnown RBP10.1□□□□□ -0.79
SMIM30-202ENST00000413744 POTEHQ6S545 545 aa10.09□□□□□ -0.79
SMIM30-202ENST00000413744 CAPN15O75808 1086 aa9.97□□□□□ -0.81
SMIM30-202ENST00000413744 NPM3O75607 178 aaKnown RBP9.91□□□□□ -0.82
SMIM30-202ENST00000413744 SPINK5Q9NQ38 1064 aaPredicted RBP9.9□□□□□ -0.82
SMIM30-202ENST00000413744 DSG3P32926 999 aa9.89□□□□□ -0.83
SMIM30-202ENST00000413744 U3KPZ7 1027 aaPredicted RBP9.89□□□□□ -0.83
SMIM30-202ENST00000413744 TRHP20396 242 aaPredicted RBP9.72□□□□□ -0.85
SMIM30-202ENST00000413744 ABCB7O75027 752 aa9.7□□□□□ -0.86
SMIM30-202ENST00000413744 APLP2Q06481 763 aa9.64□□□□□ -0.87
SMIM30-202ENST00000413744 ZNF219Q9P2Y4 722 aaPredicted RBP9.63□□□□□ -0.87
SMIM30-202ENST00000413744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.52□□□□□ -0.89
SMIM30-202ENST00000413744 SLC4A2P04920 1241 aa9.52□□□□□ -0.89
SMIM30-202ENST00000413744 HNRNPUL2Q1KMD3 747 aaKnown RBP9.52□□□□□ -0.89
SMIM30-202ENST00000413744 RBM42Q9BTD8 480 aaKnown RBP9.51□□□□□ -0.89
SMIM30-202ENST00000413744 SAMD1Q6SPF0 538 aaPredicted RBP9.44□□□□□ -0.9
SMIM30-202ENST00000413744 CHRDL2Q6WN34 429 aa9.44□□□□□ -0.9
SMIM30-202ENST00000413744 KCNA4P22459 653 aa9.4□□□□□ -0.9
SMIM30-202ENST00000413744 POLA2Q14181 598 aa9.32□□□□□ -0.92
SMIM30-202ENST00000413744 SP7Q8TDD2 431 aaPredicted RBP9.27□□□□□ -0.93
SMIM30-202ENST00000413744 MYCNP04198 464 aaPredicted RBP9.2□□□□□ -0.94
SMIM30-202ENST00000413744 AKT1S1Q96B36 256 aa9.16□□□□□ -0.94
SMIM30-202ENST00000413744 HAX1O00165 279 aa9.13□□□□□ -0.95
SMIM30-202ENST00000413744 PIP4P2Q8N4L2 257 aa9.11□□□□□ -0.95
SMIM30-202ENST00000413744 REM2Q8IYK8 340 aaPredicted RBP9.09□□□□□ -0.95
SMIM30-202ENST00000413744 ZBTB12Q9Y330 459 aaPredicted RBP9.09□□□□□ -0.95
SMIM30-202ENST00000413744 OSCARQ8IYS5 282 aa9.05□□□□□ -0.96
SMIM30-202ENST00000413744 PITPNM1O00562 1244 aa9.01□□□□□ -0.97
SMIM30-202ENST00000413744 ATF5Q9Y2D1 282 aaPredicted RBP8.99□□□□□ -0.97
SMIM30-202ENST00000413744 FXR2P51116 673 aaKnown RBP eCLIP8.95□□□□□ -0.98
SMIM30-202ENST00000413744 FOXD4L1Q9NU39 408 aa8.89□□□□□ -0.99
SMIM30-202ENST00000413744 EVX2Q03828 476 aa8.88□□□□□ -0.99
SMIM30-202ENST00000413744 SLC4A1APQ9BWU0 796 aaKnown RBP8.84□□□□□ -0.99
SMIM30-202ENST00000413744 CLEC11AQ9Y240 323 aa8.81□□□□□ -1
SMIM30-202ENST00000413744 PRKAR2AP13861 404 aaKnown RBP8.8□□□□□ -1
SMIM30-202ENST00000413744 SPDYE2BA6NHP3 402 aa8.76□□□□□ -1.01
SMIM30-202ENST00000413744 SPDYE6P0CI01 402 aa8.76□□□□□ -1.01
SMIM30-202ENST00000413744 SPDYE2Q495Y8 402 aa8.76□□□□□ -1.01
SMIM30-202ENST00000413744 FBLN2P98095 1184 aa8.75□□□□□ -1.01
SMIM30-202ENST00000413744 DNAJC5Q9H3Z4 198 aa8.74□□□□□ -1.01
SMIM30-202ENST00000413744 SPDYE1Q8NFV5 336 aaPredicted RBP8.73□□□□□ -1.01
SMIM30-202ENST00000413744 LHX8Q68G74 356 aa8.71□□□□□ -1.02
SMIM30-202ENST00000413744 ABCC9O60706 1549 aa8.7□□□□□ -1.02
SMIM30-202ENST00000413744 C19orf67A6NJJ6 358 aa8.68□□□□□ -1.02
SMIM30-202ENST00000413744 GABBR2O75899 941 aa8.68□□□□□ -1.02
SMIM30-202ENST00000413744 ZNF692Q9BU19 519 aaPredicted RBP8.64□□□□□ -1.03
SMIM30-202ENST00000413744 CHADLQ6NUI6 762 aa8.63□□□□□ -1.03
SMIM30-202ENST00000413744 ATXN8OSP0DMR3 200 aa8.6□□□□□ -1.03
SMIM30-202ENST00000413744 ZBTB22O15209 634 aa8.59□□□□□ -1.03
SMIM30-202ENST00000413744 PLSCR2Q9NRY7 297 aa8.59□□□□□ -1.03
SMIM30-202ENST00000413744 PRR29P0C7W0 189 aa8.57□□□□□ -1.04
SMIM30-202ENST00000413744 SSUH2Q9Y2M2 353 aa8.55□□□□□ -1.04
SMIM30-202ENST00000413744 EHMT2Q96KQ7 1210 aa8.54□□□□□ -1.04
SMIM30-202ENST00000413744 MKRN4PQ13434 485 aaPredicted RBP8.53□□□□□ -1.04
SMIM30-202ENST00000413744 NISCHQ9Y2I1 1504 aa8.51□□□□□ -1.05
SMIM30-202ENST00000413744 CD44P16070 742 aaKnown RBP8.51□□□□□ -1.05
SMIM30-202ENST00000413744 PABPN1Q86U42 306 aaKnown RBP eCLIP8.5□□□□□ -1.05
SMIM30-202ENST00000413744 DCBLD2Q96PD2 775 aa8.46□□□□□ -1.06
SMIM30-202ENST00000413744 POTEIP0CG38 1075 aa8.45□□□□□ -1.06
SMIM30-202ENST00000413744 CSRNP3Q8WYN3 585 aa8.45□□□□□ -1.06
SMIM30-202ENST00000413744 FARP1Q9Y4F1 1045 aaPredicted RBP8.42□□□□□ -1.06
SMIM30-202ENST00000413744 CLCN6P51797 869 aa8.38□□□□□ -1.07
SMIM30-202ENST00000413744 ZRANB1Q9UGI0 708 aa8.34□□□□□ -1.07
SMIM30-202ENST00000413744 ZNF579Q8NAF0 562 aaKnown RBP8.3□□□□□ -1.08
SMIM30-202ENST00000413744 GALR2O43603 387 aaPredicted RBP8.26□□□□□ -1.09
SMIM30-202ENST00000413744 POTEMA6NI47 508 aa8.25□□□□□ -1.09
SMIM30-202ENST00000413744 OTUD5Q96G74 571 aa8.25□□□□□ -1.09
SMIM30-202ENST00000413744 PAK3O75914 559 aaPredicted RBP8.23□□□□□ -1.09
SMIM30-202ENST00000413744 POTEGQ6S5H5 508 aa8.2□□□□□ -1.1
SMIM30-202ENST00000413744 POTEB2H3BUK9 544 aa8.19□□□□□ -1.1
SMIM30-202ENST00000413744 CREBZFQ9NS37 354 aa8.19□□□□□ -1.1
SMIM30-202ENST00000413744 PHF12Q96QT6 1004 aa8.18□□□□□ -1.1
SMIM30-202ENST00000413744 STAG3Q9UJ98 1225 aa8.16□□□□□ -1.1
SMIM30-202ENST00000413744 PELP1Q8IZL8 1130 aaKnown RBP8.1□□□□□ -1.11
SMIM30-202ENST00000413744 METRNQ9UJH8 293 aa8.1□□□□□ -1.11
SMIM30-202ENST00000413744 NPM1P06748 294 aaKnown RBP eCLIP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms