RNA–Protein interactions for RNA: ENST00000560234.1

PCLAF-208, Transcript of PCNA clamp associated factor, humanhuman

TSL 2

Gene PCLAF, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCLAF-208ENST00000560234 AEBP2Q6ZN18 517 aaPredicted RBP27.77■■■□□ 2.04
PCLAF-208ENST00000560234 CHIC1Q5VXU3 224 aa26.34■■□□□ 1.81
PCLAF-208ENST00000560234 SENP3Q9H4L4 574 aaPredicted RBP23.65■■□□□ 1.38
PCLAF-208ENST00000560234 NISCHQ9Y2I1 1504 aa23.51■■□□□ 1.35
PCLAF-208ENST00000560234 PHF23Q9BUL5 403 aaPredicted RBP23.37■■□□□ 1.33
PCLAF-208ENST00000560234 FOXD1Q16676 465 aa22.07■■□□□ 1.12
PCLAF-208ENST00000560234 PLPPR3Q6T4P5 718 aa21.02■□□□□ 0.96
PCLAF-208ENST00000560234 CCDC180Q9P1Z9 1646 aa20.76■□□□□ 0.91
PCLAF-208ENST00000560234 PPP6R1Q9UPN7 881 aa20.65■□□□□ 0.9
PCLAF-208ENST00000560234 MSH5O43196 834 aa20.63■□□□□ 0.89
PCLAF-208ENST00000560234 PIAS4Q8N2W9 510 aaPredicted RBP20.58■□□□□ 0.89
PCLAF-208ENST00000560234 ADRA2BP18089 450 aa20.55■□□□□ 0.88
PCLAF-208ENST00000560234 ABCC9O60706 1549 aa20.52■□□□□ 0.87
PCLAF-208ENST00000560234 POTEDQ86YR6 584 aa20.2■□□□□ 0.82
PCLAF-208ENST00000560234 DCAF8L2P0C7V8 631 aa19.92■□□□□ 0.78
PCLAF-208ENST00000560234 RB1CC1Q8TDY2 1594 aa19.63■□□□□ 0.73
PCLAF-208ENST00000560234 NACADO15069 1562 aa19.6■□□□□ 0.73
PCLAF-208ENST00000560234 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
PCLAF-208ENST00000560234 MYO15BQ96JP2 1530 aa19.44■□□□□ 0.7
PCLAF-208ENST00000560234 DCAF1Q9Y4B6 1507 aa19.38■□□□□ 0.69
PCLAF-208ENST00000560234 PABPN1Q86U42 306 aaKnown RBP eCLIP19.27■□□□□ 0.68
PCLAF-208ENST00000560234 SCRIBQ14160 1630 aa19.1■□□□□ 0.65
PCLAF-208ENST00000560234 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
PCLAF-208ENST00000560234 BICRAQ9NZM4 1560 aa19■□□□□ 0.63
PCLAF-208ENST00000560234 MAPK8IP2Q13387 824 aaPredicted RBP18.89■□□□□ 0.61
PCLAF-208ENST00000560234 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
PCLAF-208ENST00000560234 SHROOM4Q9ULL8 1493 aa18.8■□□□□ 0.6
PCLAF-208ENST00000560234 DMRT2Q9Y5R5 561 aa18.78■□□□□ 0.6
PCLAF-208ENST00000560234 SCAF1Q9H7N4 1312 aaKnown RBP18.77■□□□□ 0.6
PCLAF-208ENST00000560234 EIF4G1Q04637 1599 aaKnown RBP18.53■□□□□ 0.56
PCLAF-208ENST00000560234 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
PCLAF-208ENST00000560234 PPP4R3CPQ6ZMV5 832 aa18.43■□□□□ 0.54
PCLAF-208ENST00000560234 CECR2Q9BXF3 1484 aa18.4■□□□□ 0.54
PCLAF-208ENST00000560234 BAZ1AQ9NRL2 1556 aaPredicted RBP18.21■□□□□ 0.51
PCLAF-208ENST00000560234 SMARCA4P51532 1647 aa18.2■□□□□ 0.5
PCLAF-208ENST00000560234 ATAD2BQ9ULI0 1458 aa18.16■□□□□ 0.5
PCLAF-208ENST00000560234 MROH2BQ7Z745 1585 aa18.15■□□□□ 0.5
PCLAF-208ENST00000560234 NCAPD3P42695 1498 aa18.13■□□□□ 0.49
PCLAF-208ENST00000560234 SMARCA2P51531 1590 aa18.1■□□□□ 0.49
PCLAF-208ENST00000560234 HOXD11P31277 338 aaPredicted RBP18.09■□□□□ 0.49
PCLAF-208ENST00000560234 CNKSR2Q8WXI2 1034 aa18.09■□□□□ 0.49
PCLAF-208ENST00000560234 BAZ1BQ9UIG0 1483 aaKnown RBP18.04■□□□□ 0.48
PCLAF-208ENST00000560234 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
PCLAF-208ENST00000560234 HMGXB3Q12766 1538 aa17.98■□□□□ 0.47
PCLAF-208ENST00000560234 PEG3Q9GZU2 1588 aa17.96■□□□□ 0.47
PCLAF-208ENST00000560234 RNF216Q9NWF9 866 aaPredicted RBP17.93■□□□□ 0.46
PCLAF-208ENST00000560234 DCAF8L1A6NGE4 600 aa17.92■□□□□ 0.46
PCLAF-208ENST00000560234 WIZO95785 1651 aa17.92■□□□□ 0.46
PCLAF-208ENST00000560234 SUPT5HO00267 1087 aaKnown RBP17.74■□□□□ 0.43
PCLAF-208ENST00000560234 TOP2AP11388 1531 aaKnown RBP17.73■□□□□ 0.43
PCLAF-208ENST00000560234 NESP48681 1621 aa17.73■□□□□ 0.43
PCLAF-208ENST00000560234 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
PCLAF-208ENST00000560234 ERCC6Q03468 1493 aa17.69■□□□□ 0.42
PCLAF-208ENST00000560234 NCBP3Q53F19 620 aaKnown RBP17.69■□□□□ 0.42
PCLAF-208ENST00000560234 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
PCLAF-208ENST00000560234 RNF39Q9H2S5 420 aa17.64■□□□□ 0.41
PCLAF-208ENST00000560234 LAMC3Q9Y6N6 1575 aa17.59■□□□□ 0.41
PCLAF-208ENST00000560234 CCDC88BA6NC98 1476 aa17.58■□□□□ 0.41
PCLAF-208ENST00000560234 PDS5BQ9NTI5 1447 aa17.57■□□□□ 0.4
PCLAF-208ENST00000560234 CFTRP13569 1480 aa17.5■□□□□ 0.39
PCLAF-208ENST00000560234 NPM3O75607 178 aaKnown RBP17.47■□□□□ 0.39
PCLAF-208ENST00000560234 FANCD2Q9BXW9 1451 aa17.44■□□□□ 0.38
PCLAF-208ENST00000560234 CEP164Q9UPV0 1460 aa17.41■□□□□ 0.38
PCLAF-208ENST00000560234 KIF21AQ7Z4S6 1674 aa17.39■□□□□ 0.37
PCLAF-208ENST00000560234 CUX2O14529 1486 aa17.39■□□□□ 0.37
PCLAF-208ENST00000560234 C1QBPQ07021 282 aaKnown RBP17.37■□□□□ 0.37
PCLAF-208ENST00000560234 MRC2Q9UBG0 1479 aa17.37■□□□□ 0.37
PCLAF-208ENST00000560234 THOC2Q8NI27 1593 aaKnown RBP17.33■□□□□ 0.37
PCLAF-208ENST00000560234 WDR62O43379 1518 aa17.24■□□□□ 0.35
PCLAF-208ENST00000560234 URB2Q14146 1524 aaKnown RBP17.24■□□□□ 0.35
PCLAF-208ENST00000560234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.18■□□□□ 0.342e-6■■■■□ 20.7
PCLAF-208ENST00000560234 PRDM2Q13029 1718 aa17.17■□□□□ 0.34
PCLAF-208ENST00000560234 TOPBP1Q92547 1522 aa17.14■□□□□ 0.33
PCLAF-208ENST00000560234 ABCC8Q09428 1581 aa17.12■□□□□ 0.33
PCLAF-208ENST00000560234 KCNA4P22459 653 aa17.1■□□□□ 0.33
PCLAF-208ENST00000560234 DNMBPQ6XZF7 1577 aa17.08■□□□□ 0.32
PCLAF-208ENST00000560234 IFT140Q96RY7 1462 aa17.04■□□□□ 0.32
PCLAF-208ENST00000560234 CUX1P39880 1505 aa17.01■□□□□ 0.31
PCLAF-208ENST00000560234 POLA1P09884 1462 aaPredicted RBP16.99■□□□□ 0.31
PCLAF-208ENST00000560234 SOGA1O94964 1423 aa16.99■□□□□ 0.31
PCLAF-208ENST00000560234 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
PCLAF-208ENST00000560234 RAD54L2Q9Y4B4 1467 aa16.98■□□□□ 0.31
PCLAF-208ENST00000560234 WRNQ14191 1432 aaPredicted RBP eCLIP16.97■□□□□ 0.31
PCLAF-208ENST00000560234 ZNF608Q9ULD9 1512 aaPredicted RBP16.97■□□□□ 0.31
PCLAF-208ENST00000560234 TDRD9Q8NDG6 1382 aaKnown RBP16.93■□□□□ 0.3
PCLAF-208ENST00000560234 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.3
PCLAF-208ENST00000560234 DNAJC5Q9H3Z4 198 aa16.91■□□□□ 0.3
PCLAF-208ENST00000560234 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
PCLAF-208ENST00000560234 SYNJ1O43426 1573 aa16.85■□□□□ 0.29
PCLAF-208ENST00000560234 U3KPZ7 1027 aaPredicted RBP16.85■□□□□ 0.29
PCLAF-208ENST00000560234 FBLN2P98095 1184 aa16.84■□□□□ 0.29
PCLAF-208ENST00000560234 EIF4G3O43432 1585 aaKnown RBP16.83■□□□□ 0.28
PCLAF-208ENST00000560234 TOP2BQ02880 1626 aa16.83■□□□□ 0.28
PCLAF-208ENST00000560234 OSCARQ8IYS5 282 aa16.81■□□□□ 0.28
PCLAF-208ENST00000560234 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
PCLAF-208ENST00000560234 ABCA10Q8WWZ4 1543 aa16.77■□□□□ 0.28
PCLAF-208ENST00000560234 GAPVD1Q14C86 1478 aa16.76■□□□□ 0.27
PCLAF-208ENST00000560234 GRIN2BQ13224 1484 aa16.75■□□□□ 0.27
PCLAF-208ENST00000560234 CHMP7Q8WUX9 453 aaPredicted RBP16.74■□□□□ 0.27
PCLAF-208ENST00000560234 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms