RNA–Protein interactions for RNA: ENST00000561373.1

TM2D3-215, Transcript of TM2 domain containing 3, humanhuman

TSL 2 BASIC

Gene TM2D3, Length 1,734 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-215ENST00000561373 NISCHQ9Y2I1 1504 aa25.94■■□□□ 1.74
TM2D3-215ENST00000561373 CCDC180Q9P1Z9 1646 aa22.63■■□□□ 1.21
TM2D3-215ENST00000561373 ZCCHC6Q5VYS8 1495 aaKnown RBP21.81■■□□□ 1.08
TM2D3-215ENST00000561373 ABCC9O60706 1549 aa21.52■■□□□ 1.04
TM2D3-215ENST00000561373 DCAF8L2P0C7V8 631 aa21.38■■□□□ 1.01
TM2D3-215ENST00000561373 DCAF1Q9Y4B6 1507 aa21.38■■□□□ 1.01
TM2D3-215ENST00000561373 SHROOM4Q9ULL8 1493 aa21.22■□□□□ 0.99
TM2D3-215ENST00000561373 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
TM2D3-215ENST00000561373 NACADO15069 1562 aa21.04■□□□□ 0.96
TM2D3-215ENST00000561373 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
TM2D3-215ENST00000561373 AEBP2Q6ZN18 517 aaPredicted RBP20.9■□□□□ 0.94
TM2D3-215ENST00000561373 RB1CC1Q8TDY2 1594 aa20.89■□□□□ 0.93
TM2D3-215ENST00000561373 CHIC1Q5VXU3 224 aa20.7■□□□□ 0.9
TM2D3-215ENST00000561373 UNC13AQ9UPW8 1703 aa20.63■□□□□ 0.89
TM2D3-215ENST00000561373 BICRAQ9NZM4 1560 aa20.4■□□□□ 0.86
TM2D3-215ENST00000561373 SUPT5HO00267 1087 aaKnown RBP20.28■□□□□ 0.84
TM2D3-215ENST00000561373 PABPN1Q86U42 306 aaKnown RBP eCLIP20.28■□□□□ 0.84
TM2D3-215ENST00000561373 CECR2Q9BXF3 1484 aa20.25■□□□□ 0.83
TM2D3-215ENST00000561373 RSF1Q96T23 1441 aaPredicted RBP20.12■□□□□ 0.81
TM2D3-215ENST00000561373 MROH2BQ7Z745 1585 aa20.11■□□□□ 0.81
TM2D3-215ENST00000561373 BAZ1AQ9NRL2 1556 aaPredicted RBP19.99■□□□□ 0.79
TM2D3-215ENST00000561373 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
TM2D3-215ENST00000561373 WIZO95785 1651 aa19.96■□□□□ 0.79
TM2D3-215ENST00000561373 EIF4G1Q04637 1599 aaKnown RBP19.73■□□□□ 0.75
TM2D3-215ENST00000561373 PEG3Q9GZU2 1588 aa19.7■□□□□ 0.74
TM2D3-215ENST00000561373 TOP2AP11388 1531 aaKnown RBP19.68■□□□□ 0.74
TM2D3-215ENST00000561373 ATAD2BQ9ULI0 1458 aa19.64■□□□□ 0.73
TM2D3-215ENST00000561373 SMARCA2P51531 1590 aa19.57■□□□□ 0.72
TM2D3-215ENST00000561373 BAZ1BQ9UIG0 1483 aaKnown RBP19.51■□□□□ 0.71
TM2D3-215ENST00000561373 CCDC88BA6NC98 1476 aa19.49■□□□□ 0.71
TM2D3-215ENST00000561373 CC2D2AQ9P2K1 1620 aa19.47■□□□□ 0.71
TM2D3-215ENST00000561373 NCAPD3P42695 1498 aa19.43■□□□□ 0.7
TM2D3-215ENST00000561373 HMGXB3Q12766 1538 aa19.42■□□□□ 0.7
TM2D3-215ENST00000561373 DNAJC5BQ9UF47 199 aa19.38■□□□□ 0.69
TM2D3-215ENST00000561373 ABCC8Q09428 1581 aa19.14■□□□□ 0.65
TM2D3-215ENST00000561373 CFTRP13569 1480 aa19.01■□□□□ 0.63
TM2D3-215ENST00000561373 TRIM41Q8WV44 630 aa18.99■□□□□ 0.63
TM2D3-215ENST00000561373 PRDM2Q13029 1718 aa18.95■□□□□ 0.62
TM2D3-215ENST00000561373 SYNJ1O43426 1573 aa18.94■□□□□ 0.62
TM2D3-215ENST00000561373 NESP48681 1621 aa18.93■□□□□ 0.62
TM2D3-215ENST00000561373 CADPSQ9ULU8 1353 aa18.92■□□□□ 0.62
TM2D3-215ENST00000561373 WRNQ14191 1432 aaPredicted RBP eCLIP18.9■□□□□ 0.62
TM2D3-215ENST00000561373 CUX1P39880 1505 aa18.8■□□□□ 0.6
TM2D3-215ENST00000561373 TOP2BQ02880 1626 aa18.78■□□□□ 0.6
TM2D3-215ENST00000561373 BIVM-ERCC5R4GMW8 1640 aa18.78■□□□□ 0.6
TM2D3-215ENST00000561373 LAMC3Q9Y6N6 1575 aa18.78■□□□□ 0.6
TM2D3-215ENST00000561373 FAM9AQ8IZU1 332 aaPredicted RBP18.77■□□□□ 0.59
TM2D3-215ENST00000561373 FANCD2Q9BXW9 1451 aa18.76■□□□□ 0.59
TM2D3-215ENST00000561373 SOGA1O94964 1423 aa18.72■□□□□ 0.59
TM2D3-215ENST00000561373 RUSC2Q8N2Y8 1516 aa18.71■□□□□ 0.59
TM2D3-215ENST00000561373 LOC105371045A0A1W2PR82 267 aa18.69■□□□□ 0.58
TM2D3-215ENST00000561373 KIF21AQ7Z4S6 1674 aa18.69■□□□□ 0.58
TM2D3-215ENST00000561373 CEP164Q9UPV0 1460 aa18.63■□□□□ 0.57
TM2D3-215ENST00000561373 URB2Q14146 1524 aaKnown RBP18.6■□□□□ 0.57
TM2D3-215ENST00000561373 DNMBPQ6XZF7 1577 aa18.59■□□□□ 0.57
TM2D3-215ENST00000561373 PDS5BQ9NTI5 1447 aa18.58■□□□□ 0.57
TM2D3-215ENST00000561373 TOPBP1Q92547 1522 aa18.58■□□□□ 0.56
TM2D3-215ENST00000561373 FGD5Q6ZNL6 1462 aa18.57■□□□□ 0.56
TM2D3-215ENST00000561373 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
TM2D3-215ENST00000561373 EEA1Q15075 1411 aa18.5■□□□□ 0.55
TM2D3-215ENST00000561373 POLA1P09884 1462 aaPredicted RBP18.48■□□□□ 0.55
TM2D3-215ENST00000561373 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.55
TM2D3-215ENST00000561373 CSRNP3Q8WYN3 585 aa18.44■□□□□ 0.54
TM2D3-215ENST00000561373 MRC2Q9UBG0 1479 aa18.44■□□□□ 0.54
TM2D3-215ENST00000561373 CUX2O14529 1486 aa18.42■□□□□ 0.54
TM2D3-215ENST00000561373 PHF23Q9BUL5 403 aaPredicted RBP18.41■□□□□ 0.54
TM2D3-215ENST00000561373 WDR97A6NE52 1622 aa18.41■□□□□ 0.54
TM2D3-215ENST00000561373 ERCC6Q03468 1493 aa18.4■□□□□ 0.54
TM2D3-215ENST00000561373 THOC2Q8NI27 1593 aaKnown RBP18.39■□□□□ 0.53
TM2D3-215ENST00000561373 KIF21BO75037 1637 aa18.38■□□□□ 0.53
TM2D3-215ENST00000561373 KIF27Q86VH2 1401 aa18.38■□□□□ 0.53
TM2D3-215ENST00000561373 WDR62O43379 1518 aa18.37■□□□□ 0.53
TM2D3-215ENST00000561373 ABCA10Q8WWZ4 1543 aa18.36■□□□□ 0.53
TM2D3-215ENST00000561373 RAPGEF2Q9Y4G8 1499 aa18.34■□□□□ 0.53
TM2D3-215ENST00000561373 TARBP1Q13395 1621 aaKnown RBP18.33■□□□□ 0.53
TM2D3-215ENST00000561373 GOLGA3Q08378 1498 aa18.33■□□□□ 0.52
TM2D3-215ENST00000561373 PRXQ9BXM0 1461 aa18.3■□□□□ 0.52
TM2D3-215ENST00000561373 ABCA5Q8WWZ7 1642 aa18.29■□□□□ 0.52
TM2D3-215ENST00000561373 IGF1RP08069 1367 aa18.27■□□□□ 0.51
TM2D3-215ENST00000561373 TDRD9Q8NDG6 1382 aaKnown RBP18.24■□□□□ 0.51
TM2D3-215ENST00000561373 ERICH3Q5RHP9 1530 aa18.24■□□□□ 0.51
TM2D3-215ENST00000561373 TNIKQ9UKE5 1360 aa18.23■□□□□ 0.51
TM2D3-215ENST00000561373 CEP162Q5TB80 1403 aa18.2■□□□□ 0.5
TM2D3-215ENST00000561373 UBTFP17480 764 aaKnown RBP18.2■□□□□ 0.5
TM2D3-215ENST00000561373 ZNF608Q9ULD9 1512 aaPredicted RBP18.19■□□□□ 0.5
TM2D3-215ENST00000561373 GAPVD1Q14C86 1478 aa18.18■□□□□ 0.5
TM2D3-215ENST00000561373 IFT140Q96RY7 1462 aa18.16■□□□□ 0.5
TM2D3-215ENST00000561373 PBRM1Q86U86 1689 aa18.16■□□□□ 0.5
TM2D3-215ENST00000561373 AQRO60306 1485 aaKnown RBP eCLIP18.15■□□□□ 0.5
TM2D3-215ENST00000561373 CARMIL1Q5VZK9 1371 aa18.15■□□□□ 0.5
TM2D3-215ENST00000561373 CUL7Q14999 1698 aa18.13■□□□□ 0.49
TM2D3-215ENST00000561373 EIF4G3O43432 1585 aaKnown RBP18.11■□□□□ 0.49
TM2D3-215ENST00000561373 ADAMTS12P58397 1594 aa18.06■□□□□ 0.48
TM2D3-215ENST00000561373 CLIP1P30622 1438 aa18.04■□□□□ 0.48
TM2D3-215ENST00000561373 RANGAP1P46060 587 aaPredicted RBP18.03■□□□□ 0.48
TM2D3-215ENST00000561373 GRIN2BQ13224 1484 aa18.02■□□□□ 0.48
TM2D3-215ENST00000561373 SNAPC4Q5SXM2 1469 aa17.99■□□□□ 0.47
TM2D3-215ENST00000561373 CTTNBP2Q8WZ74 1663 aa17.98■□□□□ 0.47
TM2D3-215ENST00000561373 ARAP1Q96P48 1450 aa17.97■□□□□ 0.47
TM2D3-215ENST00000561373 FHAD1B1AJZ9 1412 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms