Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 LCORL-208ENST00000637787 9431 ntTSL 53.95□□□□□ -1.783e-6■■□□□ 12.6
NCBP2P52298 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 13e-8■■□□□ 12.6
NCBP2P52298 RAB11FIP3-204ENST00000449879 580 ntTSL 315.01□□□□□ -0.013e-8■■□□□ 12.6
NCBP2P52298 RAB11FIP3-206ENST00000452814 804 ntTSL 514.1□□□□□ -0.153e-8■■□□□ 12.6
NCBP2P52298 RAB11FIP3-203ENST00000434585 3550 ntAPPRIS ALT2 TSL 511.73□□□□□ -0.533e-8■■□□□ 12.6
NCBP2P52298 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC11.16□□□□□ -0.623e-8■■□□□ 12.6
NCBP2P52298 SH3D21-202ENST00000474766 2043 ntTSL 1 (best)19.66■□□□□ 0.743e-6■■□□□ 12.6
NCBP2P52298 SRRM2-220ENST00000574593 1440 ntTSL 314.47□□□□□ -0.099e-7■■□□□ 12.6
NCBP2P52298 SRRM2-213ENST00000573311 732 ntTSL 213.64□□□□□ -0.239e-7■■□□□ 12.6
NCBP2P52298 GABRE-209ENST00000486255 6176 ntTSL 1 (best)8.55□□□□□ -1.042e-8■■□□□ 12.6
NCBP2P52298 GABRE-208ENST00000483564 2747 ntTSL 38.44□□□□□ -1.062e-8■■□□□ 12.6
NCBP2P52298 GABRE-210ENST00000489333 592 ntTSL 28.11□□□□□ -1.112e-8■■□□□ 12.6
NCBP2P52298 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.262e-8■■□□□ 12.6
NCBP2P52298 GABRE-204ENST00000462018 650 ntTSL 36.36□□□□□ -1.392e-8■■□□□ 12.6
NCBP2P52298 GABRE-212ENST00000495862 238 ntTSL 34.4□□□□□ -1.712e-8■■□□□ 12.6
NCBP2P52298 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.48□□□□□ -1.691e-6■■□□□ 12.6
NCBP2P52298 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.57□□□□□ -21e-6■■□□□ 12.6
NCBP2P52298 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -21e-6■■□□□ 12.6
NCBP2P52298 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.8■□□□□ 0.123e-6■■□□□ 12.6
NCBP2P52298 ATG5-209ENST00000636335 1219 ntTSL 514.41□□□□□ -0.13e-6■■□□□ 12.6
NCBP2P52298 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.61□□□□□ -0.393e-6■■□□□ 12.6
NCBP2P52298 ATG5-208ENST00000635758 3035 ntTSL 1 (best) BASIC11.26□□□□□ -0.613e-6■■□□□ 12.6
NCBP2P52298 ATG5-203ENST00000369070 3088 ntTSL 1 (best)10.94□□□□□ -0.663e-6■■□□□ 12.6
NCBP2P52298 ATG5-204ENST00000369076 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.683e-6■■□□□ 12.6
NCBP2P52298 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.821e-6■■□□□ 12.6
NCBP2P52298 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.114e-8■■□□□ 12.6
NCBP2P52298 SEPT5-212ENST00000470814 2353 ntTSL 518.81■□□□□ 0.64e-8■■□□□ 12.6
NCBP2P52298 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.564e-8■■□□□ 12.6
NCBP2P52298 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.244e-8■■□□□ 12.6
NCBP2P52298 SEPT5-207ENST00000431044 3173 ntTSL 1 (best)15.37■□□□□ 0.054e-8■■□□□ 12.6
NCBP2P52298 RPS14-205ENST00000519690 3119 ntTSL 214.4□□□□□ -0.14e-8■■□□□ 12.6
NCBP2P52298 RPS27L-206ENST00000482846 2944 ntTSL 1 (best)14.21□□□□□ -0.144e-8■■□□□ 12.6
NCBP2P52298 SEPT5-211ENST00000455843 4113 ntTSL 1 (best)13.9□□□□□ -0.184e-8■■□□□ 12.6
NCBP2P52298 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.244e-8■■□□□ 12.6
NCBP2P52298 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.27□□□□□ -0.294e-8■■□□□ 12.6
NCBP2P52298 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.324e-8■■□□□ 12.6
NCBP2P52298 RPS14-207ENST00000521466 592 ntAPPRIS P1 TSL 512.09□□□□□ -0.474e-8■■□□□ 12.6
NCBP2P52298 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.544e-8■■□□□ 12.6
NCBP2P52298 RPS14-204ENST00000518139 669 ntTSL 310.65□□□□□ -0.74e-8■■□□□ 12.6
NCBP2P52298 RPS14-202ENST00000401695 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.734e-8■■□□□ 12.6
NCBP2P52298 RPL35A-208ENST00000485439 677 ntTSL 27.09□□□□□ -1.274e-8■■□□□ 12.6
NCBP2P52298 RPL35A-209ENST00000496582 579 ntTSL 26.47□□□□□ -1.374e-8■■□□□ 12.6
NCBP2P52298 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.27□□□□□ -1.414e-8■■□□□ 12.6
NCBP2P52298 RPL35A-201ENST00000329092 456 ntTSL 34.97□□□□□ -1.614e-8■■□□□ 12.6
NCBP2P52298 RPL35A-202ENST00000429437 442 ntTSL 54.28□□□□□ -1.724e-8■■□□□ 12.6
NCBP2P52298 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.58□□□□□ -24e-8■■□□□ 12.6
NCBP2P52298 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.931e-6■■□□□ 12.6
NCBP2P52298 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.882e-6■■□□□ 12.6
NCBP2P52298 CHFR-218ENST00000540963 875 ntTSL 223.93■■□□□ 1.422e-6■■□□□ 12.6
NCBP2P52298 TM7SF3-204ENST00000535423 537 ntTSL 423.78■■□□□ 1.42e-6■■□□□ 12.6
NCBP2P52298 TM7SF3-214ENST00000543803 577 ntTSL 323.78■■□□□ 1.42e-6■■□□□ 12.6
NCBP2P52298 CHFR-206ENST00000499045 505 ntTSL 223.27■■□□□ 1.322e-6■■□□□ 12.6
NCBP2P52298 TM7SF3-212ENST00000543088 601 ntTSL 422.94■■□□□ 1.262e-6■■□□□ 12.6
NCBP2P52298 TM7SF3-207ENST00000539399 553 ntTSL 422.94■■□□□ 1.262e-6■■□□□ 12.6
NCBP2P52298 SPON2-207ENST00000504871 581 ntTSL 422.89■■□□□ 1.252e-6■■□□□ 12.6
NCBP2P52298 TM7SF3-219ENST00000545600 579 ntTSL 422.84■■□□□ 1.252e-6■■□□□ 12.6
NCBP2P52298 TM7SF3-210ENST00000542019 737 ntTSL 322.84■■□□□ 1.252e-6■■□□□ 12.6
NCBP2P52298 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.232e-6■■□□□ 12.6
NCBP2P52298 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.74■■□□□ 1.232e-6■■□□□ 12.6
NCBP2P52298 EPM2A-225ENST00000640297 374 ntTSL 522.57■■□□□ 1.22e-6■■□□□ 12.6
NCBP2P52298 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.44■■□□□ 1.182e-6■■□□□ 12.6
NCBP2P52298 TM7SF3-205ENST00000535819 788 ntTSL 322.35■■□□□ 1.172e-6■■□□□ 12.6
NCBP2P52298 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.162e-6■■□□□ 12.6
NCBP2P52298 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.85■■□□□ 1.092e-6■■□□□ 12.6
NCBP2P52298 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.52■■□□□ 1.042e-6■■□□□ 12.6
NCBP2P52298 CHFR-215ENST00000537551 596 ntTSL 221.43■■□□□ 1.022e-6■■□□□ 12.6
NCBP2P52298 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.012e-6■■□□□ 12.6
NCBP2P52298 IDI1-203ENST00000429642 1017 ntTSL 521■□□□□ 0.952e-6■■□□□ 12.6
NCBP2P52298 GK5-207ENST00000472759 546 ntTSL 420.9■□□□□ 0.942e-6■■□□□ 12.6
NCBP2P52298 GK5-211ENST00000489085 568 ntTSL 420.9■□□□□ 0.942e-6■■□□□ 12.6
NCBP2P52298 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.87■□□□□ 0.932e-6■■□□□ 12.6
NCBP2P52298 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.55■□□□□ 0.882e-6■■□□□ 12.6
NCBP2P52298 EPM2A-220ENST00000639649 849 nt20.5■□□□□ 0.872e-6■■□□□ 12.6
NCBP2P52298 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.41■□□□□ 0.862e-6■■□□□ 12.6
NCBP2P52298 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.852e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-214ENST00000503282 584 ntTSL 220.31■□□□□ 0.843e-11■■□□□ 12.6
NCBP2P52298 UBE2D3-216ENST00000503742 1977 ntTSL 1 (best)20.19■□□□□ 0.823e-11■■□□□ 12.6
NCBP2P52298 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.82e-6■■□□□ 12.6
NCBP2P52298 CPSF7-208ENST00000450000 574 ntTSL 420.04■□□□□ 0.82e-6■■□□□ 12.6
NCBP2P52298 PTPRF-207ENST00000436724 2168 ntTSL 1 (best)19.96■□□□□ 0.792e-6■■□□□ 12.6
NCBP2P52298 FHOD1-202ENST00000561922 2069 ntTSL 219.8■□□□□ 0.762e-6■■□□□ 12.6
NCBP2P52298 STRBP-203ENST00000407982 2751 ntTSL 1 (best)19.69■□□□□ 0.742e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-229ENST00000510129 582 ntTSL 319.61■□□□□ 0.733e-11■■□□□ 12.6
NCBP2P52298 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.712e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.713e-11■■□□□ 12.6
NCBP2P52298 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.72e-6■■□□□ 12.6
NCBP2P52298 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.32■□□□□ 0.682e-6■■□□□ 12.6
NCBP2P52298 SLC6A8-210ENST00000485324 2401 ntTSL 219.21■□□□□ 0.672e-6■■□□□ 12.6
NCBP2P52298 CHFR-212ENST00000536196 597 ntTSL 419.19■□□□□ 0.662e-6■■□□□ 12.6
NCBP2P52298 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.18■□□□□ 0.662e-6■■□□□ 12.6
NCBP2P52298 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.15■□□□□ 0.662e-6■■□□□ 12.6
NCBP2P52298 CHFR-217ENST00000540537 913 ntTSL 319.12■□□□□ 0.652e-6■■□□□ 12.6
NCBP2P52298 CHFR-209ENST00000535181 753 ntTSL 219.06■□□□□ 0.642e-6■■□□□ 12.6
NCBP2P52298 GK5-210ENST00000487672 1103 ntTSL 1 (best)18.95■□□□□ 0.622e-6■■□□□ 12.6
NCBP2P52298 CROCCP2-207ENST00000640476 1750 ntTSL 518.94■□□□□ 0.622e-6■■□□□ 12.6
NCBP2P52298 SLC11A2-210ENST00000547510 924 ntTSL 518.93■□□□□ 0.622e-6■■□□□ 12.6
NCBP2P52298 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.622e-6■■□□□ 12.6
NCBP2P52298 PKMYT1-205ENST00000570649 612 ntTSL 218.92■□□□□ 0.622e-6■■□□□ 12.6
NCBP2P52298 SPON2-214ENST00000510542 633 ntTSL 318.89■□□□□ 0.612e-6■■□□□ 12.6
NCBP2P52298 TM7SF3-208ENST00000539741 573 ntTSL 418.86■□□□□ 0.612e-6■■□□□ 12.6
Retrieved 100 of 18,329 protein–RNA pairs in 152.3 ms