RNA–Protein interactions for RNA: ENST00000434585.5

RAB11FIP3-203, Transcript of RAB11 family interacting protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene RAB11FIP3, Length 3,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-203ENST00000434585 NISCHQ9Y2I1 1504 aa23.96■■□□□ 1.43
RAB11FIP3-203ENST00000434585 DCAF8L2P0C7V8 631 aa21.98■■□□□ 1.11
RAB11FIP3-203ENST00000434585 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
RAB11FIP3-203ENST00000434585 SUPT5HO00267 1087 aaKnown RBP21.62■■□□□ 1.05
RAB11FIP3-203ENST00000434585 EHMT2Q96KQ7 1210 aa20.55■□□□□ 0.88
RAB11FIP3-203ENST00000434585 FAM9AQ8IZU1 332 aaPredicted RBP20.23■□□□□ 0.83
RAB11FIP3-203ENST00000434585 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
RAB11FIP3-203ENST00000434585 PCGF6Q9BYE7 350 aa20.21■□□□□ 0.83
RAB11FIP3-203ENST00000434585 LOC105371045A0A1W2PR82 267 aa20.11■□□□□ 0.81
RAB11FIP3-203ENST00000434585 ZCCHC6Q5VYS8 1495 aaKnown RBP20.08■□□□□ 0.8
RAB11FIP3-203ENST00000434585 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
RAB11FIP3-203ENST00000434585 ABCC9O60706 1549 aa19.79■□□□□ 0.76
RAB11FIP3-203ENST00000434585 TTBK1Q5TCY1 1321 aaPredicted RBP19.78■□□□□ 0.76
RAB11FIP3-203ENST00000434585 MYO15BQ96JP2 1530 aa19.77■□□□□ 0.76
RAB11FIP3-203ENST00000434585 CCDC180Q9P1Z9 1646 aa19.77■□□□□ 0.75
RAB11FIP3-203ENST00000434585 PPARGC1BQ86YN6 1023 aaKnown RBP19.76■□□□□ 0.75
RAB11FIP3-203ENST00000434585 HRCP23327 699 aa19.55■□□□□ 0.72
RAB11FIP3-203ENST00000434585 SCRIBQ14160 1630 aa19.53■□□□□ 0.72
RAB11FIP3-203ENST00000434585 RANGAP1P46060 587 aaPredicted RBP19.41■□□□□ 0.7
RAB11FIP3-203ENST00000434585 PABPN1Q86U42 306 aaKnown RBP eCLIP19.38■□□□□ 0.695e-7■■■■□ 21.5
RAB11FIP3-203ENST00000434585 TRIM26Q12899 539 aaPredicted RBP19.3■□□□□ 0.68
RAB11FIP3-203ENST00000434585 RSF1Q96T23 1441 aaPredicted RBP19.19■□□□□ 0.66
RAB11FIP3-203ENST00000434585 UBTFP17480 764 aaKnown RBP19.17■□□□□ 0.66
RAB11FIP3-203ENST00000434585 CECR2Q9BXF3 1484 aa19.09■□□□□ 0.65
RAB11FIP3-203ENST00000434585 CCER1Q8TC90 406 aaPredicted RBP19.05■□□□□ 0.64
RAB11FIP3-203ENST00000434585 DCAF1Q9Y4B6 1507 aa19.04■□□□□ 0.64
RAB11FIP3-203ENST00000434585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
RAB11FIP3-203ENST00000434585 RB1CC1Q8TDY2 1594 aa18.95■□□□□ 0.62
RAB11FIP3-203ENST00000434585 MROH2BQ7Z745 1585 aa18.83■□□□□ 0.61
RAB11FIP3-203ENST00000434585 APLP2Q06481 763 aa18.81■□□□□ 0.6
RAB11FIP3-203ENST00000434585 ZEB1P37275 1124 aaPredicted RBP18.78■□□□□ 0.6
RAB11FIP3-203ENST00000434585 HNRNPUL2Q1KMD3 747 aaKnown RBP18.78■□□□□ 0.6
RAB11FIP3-203ENST00000434585 WIZO95785 1651 aa18.68■□□□□ 0.58
RAB11FIP3-203ENST00000434585 NACADO15069 1562 aa18.68■□□□□ 0.58
RAB11FIP3-203ENST00000434585 ATP1B4Q9UN42 357 aaPredicted RBP18.63■□□□□ 0.57
RAB11FIP3-203ENST00000434585 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
RAB11FIP3-203ENST00000434585 YTHDC1Q96MU7 727 aaKnown RBP18.6■□□□□ 0.57
RAB11FIP3-203ENST00000434585 ITGAEP38570 1179 aa18.59■□□□□ 0.57
RAB11FIP3-203ENST00000434585 ABCC8Q09428 1581 aa18.56■□□□□ 0.56
RAB11FIP3-203ENST00000434585 SOGA1O94964 1423 aa18.5■□□□□ 0.55
RAB11FIP3-203ENST00000434585 CCDC88BA6NC98 1476 aa18.47■□□□□ 0.55
RAB11FIP3-203ENST00000434585 BAZ1AQ9NRL2 1556 aaPredicted RBP18.43■□□□□ 0.54
RAB11FIP3-203ENST00000434585 DIEXFQ68CQ4 756 aaKnown RBP18.38■□□□□ 0.53
RAB11FIP3-203ENST00000434585 RUSC2Q8N2Y8 1516 aa18.35■□□□□ 0.53
RAB11FIP3-203ENST00000434585 CEP162Q5TB80 1403 aa18.35■□□□□ 0.53
RAB11FIP3-203ENST00000434585 P3H3Q8IVL6 736 aa18.29■□□□□ 0.52
RAB11FIP3-203ENST00000434585 WRNQ14191 1432 aaPredicted RBP eCLIP18.26■□□□□ 0.51
RAB11FIP3-203ENST00000434585 CENPBP07199 599 aaPredicted RBP18.2■□□□□ 0.5
RAB11FIP3-203ENST00000434585 SMARCA4P51532 1647 aa18.17■□□□□ 0.5
RAB11FIP3-203ENST00000434585 TOP2AP11388 1531 aaKnown RBP18.15■□□□□ 0.5
RAB11FIP3-203ENST00000434585 BAZ1BQ9UIG0 1483 aaKnown RBP18.15■□□□□ 0.5
RAB11FIP3-203ENST00000434585 CLIP1P30622 1438 aa18.13■□□□□ 0.49
RAB11FIP3-203ENST00000434585 SCAF1Q9H7N4 1312 aaKnown RBP18.12■□□□□ 0.49
RAB11FIP3-203ENST00000434585 TNIKQ9UKE5 1360 aa18.11■□□□□ 0.49
RAB11FIP3-203ENST00000434585 FAM50AQ14320 339 aaKnown RBP18.09■□□□□ 0.49
RAB11FIP3-203ENST00000434585 NEUROD1Q13562 356 aa18.09■□□□□ 0.49
RAB11FIP3-203ENST00000434585 SMARCA2P51531 1590 aa18.08■□□□□ 0.49
RAB11FIP3-203ENST00000434585 GTF3C3Q9Y5Q9 886 aa18.08■□□□□ 0.49
RAB11FIP3-203ENST00000434585 GOLGA3Q08378 1498 aa18.07■□□□□ 0.48
RAB11FIP3-203ENST00000434585 ZNF316A6NFI3 1004 aaPredicted RBP18.06■□□□□ 0.48
RAB11FIP3-203ENST00000434585 ARID3CA6NKF2 412 aa18.04■□□□□ 0.48
RAB11FIP3-203ENST00000434585 ACIN1Q9UKV3 1341 aaKnown RBP17.97■□□□□ 0.47
RAB11FIP3-203ENST00000434585 ATAD2BQ9ULI0 1458 aa17.96■□□□□ 0.47
RAB11FIP3-203ENST00000434585 UNC13AQ9UPW8 1703 aa17.95■□□□□ 0.46
RAB11FIP3-203ENST00000434585 KANK4Q5T7N3 995 aaPredicted RBP17.95■□□□□ 0.46
RAB11FIP3-203ENST00000434585 MIER1Q8N108 512 aa17.94■□□□□ 0.46
RAB11FIP3-203ENST00000434585 EEA1Q15075 1411 aa17.93■□□□□ 0.46
RAB11FIP3-203ENST00000434585 RAPGEF2Q9Y4G8 1499 aa17.93■□□□□ 0.46
RAB11FIP3-203ENST00000434585 CEP164Q9UPV0 1460 aa17.92■□□□□ 0.46
RAB11FIP3-203ENST00000434585 CNGB1Q14028 1251 aaPredicted RBP17.85■□□□□ 0.45
RAB11FIP3-203ENST00000434585 HIRIP3Q9BW71 556 aaPredicted RBP17.85■□□□□ 0.45
RAB11FIP3-203ENST00000434585 BICRAQ9NZM4 1560 aa17.84■□□□□ 0.45
RAB11FIP3-203ENST00000434585 SYNJ1O43426 1573 aa17.8■□□□□ 0.44
RAB11FIP3-203ENST00000434585 VPS8Q8N3P4 1428 aa17.76■□□□□ 0.43
RAB11FIP3-203ENST00000434585 KIF27Q86VH2 1401 aa17.74■□□□□ 0.43
RAB11FIP3-203ENST00000434585 CUX2O14529 1486 aa17.71■□□□□ 0.43
RAB11FIP3-203ENST00000434585 SIN3AQ96ST3 1273 aa17.68■□□□□ 0.42
RAB11FIP3-203ENST00000434585 FBLN2P98095 1184 aa17.67■□□□□ 0.42
RAB11FIP3-203ENST00000434585 BCANQ96GW7 911 aa17.66■□□□□ 0.42
RAB11FIP3-203ENST00000434585 CHIC2Q9UKJ5 165 aa17.66■□□□□ 0.42
RAB11FIP3-203ENST00000434585 EIF4G1Q04637 1599 aaKnown RBP17.65■□□□□ 0.42
RAB11FIP3-203ENST00000434585 TRIM52Q96A61 297 aa17.65■□□□□ 0.42
RAB11FIP3-203ENST00000434585 DDX10Q13206 875 aaKnown RBP17.64■□□□□ 0.41
RAB11FIP3-203ENST00000434585 POLR3GLQ9BT43 218 aa17.64■□□□□ 0.41
RAB11FIP3-203ENST00000434585 CARMIL1Q5VZK9 1371 aa17.6■□□□□ 0.41
RAB11FIP3-203ENST00000434585 DNAJC5BQ9UF47 199 aa17.55■□□□□ 0.4
RAB11FIP3-203ENST00000434585 KIF21BO75037 1637 aa17.53■□□□□ 0.4
RAB11FIP3-203ENST00000434585 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
RAB11FIP3-203ENST00000434585 CCNB3Q8WWL7 1395 aa17.53■□□□□ 0.4
RAB11FIP3-203ENST00000434585 RRP7BPQ9NSQ0 103 aa17.51■□□□□ 0.39
RAB11FIP3-203ENST00000434585 PELP1Q8IZL8 1130 aaKnown RBP17.51■□□□□ 0.39
RAB11FIP3-203ENST00000434585 ARAP1Q96P48 1450 aa17.49■□□□□ 0.39
RAB11FIP3-203ENST00000434585 CADPSQ9ULU8 1353 aa17.49■□□□□ 0.39
RAB11FIP3-203ENST00000434585 ZNF326Q5BKZ1 582 aaKnown RBP17.48■□□□□ 0.39
RAB11FIP3-203ENST00000434585 KCNH8Q96L42 1107 aa17.46■□□□□ 0.39
RAB11FIP3-203ENST00000434585 ZNF777Q9ULD5 760 aaPredicted RBP17.46■□□□□ 0.39
RAB11FIP3-203ENST00000434585 MTUS2Q5JR59 1369 aa17.46■□□□□ 0.39
RAB11FIP3-203ENST00000434585 CUX1P39880 1505 aa17.46■□□□□ 0.38
RAB11FIP3-203ENST00000434585 IGF1RP08069 1367 aa17.45■□□□□ 0.38
RAB11FIP3-203ENST00000434585 FHOD3Q2V2M9 1422 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms