RNA–Protein interactions for RNA: ENST00000487672.1

GK5-210, Transcript of glycerol kinase 5, humanhuman

TSL 1 (best)

Gene GK5, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GK5-210ENST00000487672 NISCHQ9Y2I1 1504 aa53.68■■■■■ 6.18
GK5-210ENST00000487672 ABCC9O60706 1549 aa48.37■■■■■ 5.33
GK5-210ENST00000487672 CCDC180Q9P1Z9 1646 aa48.25■■■■■ 5.31
GK5-210ENST00000487672 RB1CC1Q8TDY2 1594 aa46■■■■■ 4.95
GK5-210ENST00000487672 NACADO15069 1562 aa45.68■■■■■ 4.9
GK5-210ENST00000487672 DNAJC5BQ9UF47 199 aa45.64■■■■■ 4.9
GK5-210ENST00000487672 DCAF8L2P0C7V8 631 aa45.18■■■■■ 4.82
GK5-210ENST00000487672 MYO15BQ96JP2 1530 aa45.07■■■■■ 4.81
GK5-210ENST00000487672 PABPN1Q86U42 306 aaKnown RBP eCLIP44.98■■■■■ 4.79
GK5-210ENST00000487672 UNC13AQ9UPW8 1703 aa44.92■■■■■ 4.78
GK5-210ENST00000487672 BICRAQ9NZM4 1560 aa44.73■■■■■ 4.75
GK5-210ENST00000487672 ZCCHC6Q5VYS8 1495 aaKnown RBP44.46■■■■■ 4.71
GK5-210ENST00000487672 DCAF1Q9Y4B6 1507 aa44.4■■■■■ 4.7
GK5-210ENST00000487672 SHROOM4Q9ULL8 1493 aa44.16■■■■■ 4.66
GK5-210ENST00000487672 SCRIBQ14160 1630 aa43.85■■■■■ 4.61
GK5-210ENST00000487672 CC2D2AQ9P2K1 1620 aa43.73■■■■■ 4.59
GK5-210ENST00000487672 CECR2Q9BXF3 1484 aa43.64■■■■■ 4.58
GK5-210ENST00000487672 EIF4G1Q04637 1599 aaKnown RBP43.61■■■■■ 4.57
GK5-210ENST00000487672 NCAPD3P42695 1498 aa42.21■■■■■ 4.35
GK5-210ENST00000487672 DNAJC5Q9H3Z4 198 aa42.07■■■■■ 4.33
GK5-210ENST00000487672 ATAD2BQ9ULI0 1458 aa42.02■■■■■ 4.32
GK5-210ENST00000487672 SMARCA4P51532 1647 aa41.88■■■■■ 4.3
GK5-210ENST00000487672 SMARCA2P51531 1590 aa41.87■■■■■ 4.29
GK5-210ENST00000487672 CUX2O14529 1486 aa41.86■■■■■ 4.29
GK5-210ENST00000487672 HMGXB3Q12766 1538 aa41.85■■■■■ 4.29
GK5-210ENST00000487672 ERCC6Q03468 1493 aa41.76■■■■■ 4.28
GK5-210ENST00000487672 BAZ1AQ9NRL2 1556 aaPredicted RBP41.65■■■■■ 4.26
GK5-210ENST00000487672 PEG3Q9GZU2 1588 aa41.57■■■■■ 4.25
GK5-210ENST00000487672 BAZ1BQ9UIG0 1483 aaKnown RBP41.54■■■■■ 4.24
GK5-210ENST00000487672 NESP48681 1621 aa41.51■■■■■ 4.24
GK5-210ENST00000487672 MROH2BQ7Z745 1585 aa41.33■■■■■ 4.21
GK5-210ENST00000487672 LAMC3Q9Y6N6 1575 aa41.24■■■■■ 4.19
GK5-210ENST00000487672 THOC2Q8NI27 1593 aaKnown RBP41.18■■■■■ 4.18
GK5-210ENST00000487672 PDS5BQ9NTI5 1447 aa41■■■■■ 4.15
GK5-210ENST00000487672 KIF21AQ7Z4S6 1674 aa40.94■■■■■ 4.15
GK5-210ENST00000487672 CADPSQ9ULU8 1353 aa40.87■■■■■ 4.13
GK5-210ENST00000487672 WIZO95785 1651 aa40.77■■■■■ 4.12
GK5-210ENST00000487672 MRC2Q9UBG0 1479 aa40.65■■■■■ 4.1
GK5-210ENST00000487672 WDR62O43379 1518 aa40.6■■■■■ 4.09
GK5-210ENST00000487672 CEP164Q9UPV0 1460 aa40.43■■■■■ 4.06
GK5-210ENST00000487672 RSF1Q96T23 1441 aaPredicted RBP40.42■■■■■ 4.06
GK5-210ENST00000487672 CFTRP13569 1480 aa40.39■■■■■ 4.06
GK5-210ENST00000487672 FANCD2Q9BXW9 1451 aa40.38■■■■■ 4.05
GK5-210ENST00000487672 TOP2AP11388 1531 aaKnown RBP40.3■■■■■ 4.04
GK5-210ENST00000487672 URB2Q14146 1524 aaKnown RBP40.08■■■■■ 4.01
GK5-210ENST00000487672 TRIM41Q8WV44 630 aa39.98■■■■□ 3.99
GK5-210ENST00000487672 PRDM2Q13029 1718 aa39.88■■■■□ 3.97
GK5-210ENST00000487672 OSCARQ8IYS5 282 aa39.86■■■■□ 3.97
GK5-210ENST00000487672 CCDC88BA6NC98 1476 aa39.84■■■■□ 3.97
GK5-210ENST00000487672 IFT140Q96RY7 1462 aa39.67■■■■□ 3.94
GK5-210ENST00000487672 TOPBP1Q92547 1522 aa39.6■■■■□ 3.93
GK5-210ENST00000487672 ZNF608Q9ULD9 1512 aaPredicted RBP39.6■■■■□ 3.93
GK5-210ENST00000487672 ABCC8Q09428 1581 aa39.52■■■■□ 3.92
GK5-210ENST00000487672 DNMBPQ6XZF7 1577 aa39.44■■■■□ 3.9
GK5-210ENST00000487672 EIF4G3O43432 1585 aaKnown RBP39.36■■■■□ 3.89
GK5-210ENST00000487672 RIMBP3CA6NJZ7 1639 aa39.36■■■■□ 3.89
GK5-210ENST00000487672 RIMBP3BA6NNM3 1639 aa39.36■■■■□ 3.89
GK5-210ENST00000487672 RIMBP3Q9UFD9 1639 aa39.36■■■■□ 3.89
GK5-210ENST00000487672 TARBP1Q13395 1621 aaKnown RBP39.29■■■■□ 3.88
GK5-210ENST00000487672 ARHGEF11O15085 1522 aa39.24■■■■□ 3.87
GK5-210ENST00000487672 AQRO60306 1485 aaKnown RBP eCLIP39.2■■■■□ 3.87
GK5-210ENST00000487672 POLA1P09884 1462 aaPredicted RBP39.19■■■■□ 3.86
GK5-210ENST00000487672 CHD1O14646 1710 aa39.06■■■■□ 3.84
GK5-210ENST00000487672 RAD54L2Q9Y4B4 1467 aa39.02■■■■□ 3.84
GK5-210ENST00000487672 SOGA1O94964 1423 aa38.97■■■■□ 3.83
GK5-210ENST00000487672 TDRD9Q8NDG6 1382 aaKnown RBP38.92■■■■□ 3.82
GK5-210ENST00000487672 WDR97A6NE52 1622 aa38.9■■■■□ 3.82
GK5-210ENST00000487672 CYB5RLQ6IPT4 315 aa38.9■■■■□ 3.82
GK5-210ENST00000487672 FGD5Q6ZNL6 1462 aa38.89■■■■□ 3.82
GK5-210ENST00000487672 FBLN2P98095 1184 aa38.87■■■■□ 3.81
GK5-210ENST00000487672 ARAP1Q96P48 1450 aa38.86■■■■□ 3.81
GK5-210ENST00000487672 CUX1P39880 1505 aa38.84■■■■□ 3.81
GK5-210ENST00000487672 SNAPC4Q5SXM2 1469 aa38.79■■■■□ 3.8
GK5-210ENST00000487672 MAGI1Q96QZ7 1491 aaPredicted RBP38.73■■■■□ 3.79
GK5-210ENST00000487672 CLASP1Q7Z460 1538 aa38.71■■■■□ 3.79
GK5-210ENST00000487672 GRIN2BQ13224 1484 aa38.68■■■■□ 3.78
GK5-210ENST00000487672 CHMP7Q8WUX9 453 aaPredicted RBP38.62■■■■□ 3.77
GK5-210ENST00000487672 SYNJ1O43426 1573 aa38.61■■■■□ 3.77
GK5-210ENST00000487672 SYNJ2O15056 1496 aa38.6■■■■□ 3.77
GK5-210ENST00000487672 GAPVD1Q14C86 1478 aa38.51■■■■□ 3.76
GK5-210ENST00000487672 ABCA10Q8WWZ4 1543 aa38.48■■■■□ 3.75
GK5-210ENST00000487672 TRHP20396 242 aaPredicted RBP38.46■■■■□ 3.75
GK5-210ENST00000487672 PBRM1Q86U86 1689 aa38.46■■■■□ 3.75
GK5-210ENST00000487672 ABCA5Q8WWZ7 1642 aa38.43■■■■□ 3.74
GK5-210ENST00000487672 SUPT5HO00267 1087 aaKnown RBP38.3■■■■□ 3.72
GK5-210ENST00000487672 WRNQ14191 1432 aaPredicted RBP eCLIP38.24■■■■□ 3.71
GK5-210ENST00000487672 GRIN2AQ12879 1464 aa38.19■■■■□ 3.7
GK5-210ENST00000487672 TOP2BQ02880 1626 aa38.16■■■■□ 3.7
GK5-210ENST00000487672 BIVM-ERCC5R4GMW8 1640 aa38.16■■■■□ 3.7
GK5-210ENST00000487672 ADAMTS12P58397 1594 aa38.14■■■■□ 3.7
GK5-210ENST00000487672 NUP160Q12769 1436 aa38.12■■■■□ 3.69
GK5-210ENST00000487672 CEP170Q5SW79 1584 aa38.06■■■■□ 3.68
GK5-210ENST00000487672 ERCC6L2Q5T890 1561 aa38.04■■■■□ 3.68
GK5-210ENST00000487672 FHAD1B1AJZ9 1412 aa38.04■■■■□ 3.68
GK5-210ENST00000487672 ERICH3Q5RHP9 1530 aa37.99■■■■□ 3.67
GK5-210ENST00000487672 SHROOM2Q13796 1616 aa37.96■■■■□ 3.67
GK5-210ENST00000487672 PRG4Q92954 1404 aaPredicted RBP37.7■■■■□ 3.62
GK5-210ENST00000487672 JPH4Q96JJ6 628 aa37.66■■■■□ 3.62
GK5-210ENST00000487672 RUSC2Q8N2Y8 1516 aa37.61■■■■□ 3.61
GK5-210ENST00000487672 KIF13AQ9H1H9 1805 aa37.49■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms