RNA–Protein interactions for RNA: ENST00000574593.1

SRRM2-220, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-220ENST00000574593 NISCHQ9Y2I1 1504 aa38.71■■■■□ 3.79
SRRM2-220ENST00000574593 CCDC180Q9P1Z9 1646 aa34.56■■■■□ 3.12
SRRM2-220ENST00000574593 ABCC9O60706 1549 aa34.13■■■■□ 3.05
SRRM2-220ENST00000574593 RB1CC1Q8TDY2 1594 aa32.69■■■□□ 2.82
SRRM2-220ENST00000574593 NACADO15069 1562 aa32.56■■■□□ 2.8
SRRM2-220ENST00000574593 DCAF8L2P0C7V8 631 aa32.54■■■□□ 2.8
SRRM2-220ENST00000574593 MYO15BQ96JP2 1530 aa32.24■■■□□ 2.75
SRRM2-220ENST00000574593 ZCCHC6Q5VYS8 1495 aaKnown RBP32.19■■■□□ 2.74
SRRM2-220ENST00000574593 DCAF1Q9Y4B6 1507 aa32■■■□□ 2.71
SRRM2-220ENST00000574593 UNC13AQ9UPW8 1703 aa31.91■■■□□ 2.7
SRRM2-220ENST00000574593 PABPN1Q86U42 306 aaKnown RBP eCLIP31.83■■■□□ 2.69
SRRM2-220ENST00000574593 BICRAQ9NZM4 1560 aa31.65■■■□□ 2.66
SRRM2-220ENST00000574593 SCRIBQ14160 1630 aa31.54■■■□□ 2.64
SRRM2-220ENST00000574593 DNAJC5BQ9UF47 199 aa31.51■■■□□ 2.64
SRRM2-220ENST00000574593 SHROOM4Q9ULL8 1493 aa31.33■■■□□ 2.61
SRRM2-220ENST00000574593 EIF4G1Q04637 1599 aaKnown RBP30.89■■■□□ 2.54
SRRM2-220ENST00000574593 CC2D2AQ9P2K1 1620 aa30.84■■■□□ 2.53
SRRM2-220ENST00000574593 CECR2Q9BXF3 1484 aa30.69■■■□□ 2.5
SRRM2-220ENST00000574593 SMARCA4P51532 1647 aa30.11■■■□□ 2.41
SRRM2-220ENST00000574593 BAZ1AQ9NRL2 1556 aaPredicted RBP30.05■■■□□ 2.4
SRRM2-220ENST00000574593 NCAPD3P42695 1498 aa30.02■■■□□ 2.4
SRRM2-220ENST00000574593 ATAD2BQ9ULI0 1458 aa30.02■■■□□ 2.4
SRRM2-220ENST00000574593 SMARCA2P51531 1590 aa29.99■■■□□ 2.39
SRRM2-220ENST00000574593 HMGXB3Q12766 1538 aa29.88■■■□□ 2.37
SRRM2-220ENST00000574593 MROH2BQ7Z745 1585 aa29.83■■■□□ 2.37
SRRM2-220ENST00000574593 PEG3Q9GZU2 1588 aa29.8■■■□□ 2.36
SRRM2-220ENST00000574593 BAZ1BQ9UIG0 1483 aaKnown RBP29.79■■■□□ 2.36
SRRM2-220ENST00000574593 WIZO95785 1651 aa29.5■■■□□ 2.31
SRRM2-220ENST00000574593 ERCC6Q03468 1493 aa29.47■■■□□ 2.31
SRRM2-220ENST00000574593 NESP48681 1621 aa29.41■■■□□ 2.3
SRRM2-220ENST00000574593 RSF1Q96T23 1441 aaPredicted RBP29.38■■■□□ 2.29
SRRM2-220ENST00000574593 LAMC3Q9Y6N6 1575 aa29.31■■■□□ 2.28
SRRM2-220ENST00000574593 CUX2O14529 1486 aa29.22■■■□□ 2.27
SRRM2-220ENST00000574593 TOP2AP11388 1531 aaKnown RBP29.18■■■□□ 2.26
SRRM2-220ENST00000574593 CADPSQ9ULU8 1353 aa29.15■■■□□ 2.26
SRRM2-220ENST00000574593 PDS5BQ9NTI5 1447 aa29.14■■■□□ 2.26
SRRM2-220ENST00000574593 KIF21AQ7Z4S6 1674 aa29.07■■■□□ 2.24
SRRM2-220ENST00000574593 THOC2Q8NI27 1593 aaKnown RBP29.04■■■□□ 2.24
SRRM2-220ENST00000574593 CFTRP13569 1480 aa28.92■■■□□ 2.22
SRRM2-220ENST00000574593 MRC2Q9UBG0 1479 aa28.86■■■□□ 2.21
SRRM2-220ENST00000574593 CEP164Q9UPV0 1460 aa28.85■■■□□ 2.21
SRRM2-220ENST00000574593 FANCD2Q9BXW9 1451 aa28.84■■■□□ 2.21
SRRM2-220ENST00000574593 CCDC88BA6NC98 1476 aa28.83■■■□□ 2.2
SRRM2-220ENST00000574593 WDR62O43379 1518 aa28.76■■■□□ 2.19
SRRM2-220ENST00000574593 PRDM2Q13029 1718 aa28.7■■■□□ 2.18
SRRM2-220ENST00000574593 DNAJC5Q9H3Z4 198 aa28.64■■■□□ 2.18
SRRM2-220ENST00000574593 URB2Q14146 1524 aaKnown RBP28.55■■■□□ 2.16
SRRM2-220ENST00000574593 SUPT5HO00267 1087 aaKnown RBP28.47■■■□□ 2.15
SRRM2-220ENST00000574593 TOPBP1Q92547 1522 aa28.34■■■□□ 2.13
SRRM2-220ENST00000574593 ABCC8Q09428 1581 aa28.32■■■□□ 2.12
SRRM2-220ENST00000574593 DNMBPQ6XZF7 1577 aa28.29■■■□□ 2.12
SRRM2-220ENST00000574593 IFT140Q96RY7 1462 aa28.25■■■□□ 2.11
SRRM2-220ENST00000574593 ZNF608Q9ULD9 1512 aaPredicted RBP28.13■■■□□ 2.09
SRRM2-220ENST00000574593 POLA1P09884 1462 aaPredicted RBP28.08■■■□□ 2.09
SRRM2-220ENST00000574593 TARBP1Q13395 1621 aaKnown RBP28.03■■■□□ 2.08
SRRM2-220ENST00000574593 EIF4G3O43432 1585 aaKnown RBP28.02■■■□□ 2.08
SRRM2-220ENST00000574593 CUX1P39880 1505 aa28■■■□□ 2.07
SRRM2-220ENST00000574593 FGD5Q6ZNL6 1462 aa27.97■■■□□ 2.07
SRRM2-220ENST00000574593 SOGA1O94964 1423 aa27.96■■■□□ 2.07
SRRM2-220ENST00000574593 OSCARQ8IYS5 282 aa27.96■■■□□ 2.07
SRRM2-220ENST00000574593 RAD54L2Q9Y4B4 1467 aa27.96■■■□□ 2.07
SRRM2-220ENST00000574593 AQRO60306 1485 aaKnown RBP eCLIP27.94■■■□□ 2.063e-12■■■□□ 16.7
SRRM2-220ENST00000574593 TDRD9Q8NDG6 1382 aaKnown RBP27.84■■■□□ 2.05
SRRM2-220ENST00000574593 WDR97A6NE52 1622 aa27.82■■■□□ 2.04
SRRM2-220ENST00000574593 WRNQ14191 1432 aaPredicted RBP eCLIP27.74■■■□□ 2.03
SRRM2-220ENST00000574593 CHD1O14646 1710 aa27.72■■■□□ 2.03
SRRM2-220ENST00000574593 FBLN2P98095 1184 aa27.72■■■□□ 2.03
SRRM2-220ENST00000574593 SNAPC4Q5SXM2 1469 aa27.7■■■□□ 2.02
SRRM2-220ENST00000574593 TOP2BQ02880 1626 aa27.69■■■□□ 2.02
SRRM2-220ENST00000574593 BIVM-ERCC5R4GMW8 1640 aa27.69■■■□□ 2.02
SRRM2-220ENST00000574593 GRIN2BQ13224 1484 aa27.68■■■□□ 2.02
SRRM2-220ENST00000574593 ABCA10Q8WWZ4 1543 aa27.68■■■□□ 2.02
SRRM2-220ENST00000574593 SYNJ1O43426 1573 aa27.67■■■□□ 2.02
SRRM2-220ENST00000574593 TRIM41Q8WV44 630 aa27.65■■■□□ 2.02
SRRM2-220ENST00000574593 GAPVD1Q14C86 1478 aa27.63■■■□□ 2.01
SRRM2-220ENST00000574593 MAGI1Q96QZ7 1491 aaPredicted RBP27.63■■■□□ 2.01
SRRM2-220ENST00000574593 PBRM1Q86U86 1689 aa27.61■■■□□ 2.01
SRRM2-220ENST00000574593 ABCA5Q8WWZ7 1642 aa27.6■■■□□ 2.01
SRRM2-220ENST00000574593 CHMP7Q8WUX9 453 aaPredicted RBP27.58■■■□□ 2
SRRM2-220ENST00000574593 RIMBP3CA6NJZ7 1639 aa27.54■■■□□ 2
SRRM2-220ENST00000574593 RIMBP3BA6NNM3 1639 aa27.54■■■□□ 2
SRRM2-220ENST00000574593 RIMBP3Q9UFD9 1639 aa27.54■■■□□ 2
SRRM2-220ENST00000574593 SYNJ2O15056 1496 aa27.53■■■□□ 2
SRRM2-220ENST00000574593 ARHGEF11O15085 1522 aa27.51■■■□□ 2
SRRM2-220ENST00000574593 CLASP1Q7Z460 1538 aa27.39■■□□□ 1.98
SRRM2-220ENST00000574593 ADAMTS12P58397 1594 aa27.36■■□□□ 1.97
SRRM2-220ENST00000574593 ERICH3Q5RHP9 1530 aa27.35■■□□□ 1.97
SRRM2-220ENST00000574593 GRIN2AQ12879 1464 aa27.32■■□□□ 1.96
SRRM2-220ENST00000574593 FHAD1B1AJZ9 1412 aa27.31■■□□□ 1.96
SRRM2-220ENST00000574593 CYB5RLQ6IPT4 315 aa27.29■■□□□ 1.96
SRRM2-220ENST00000574593 ARAP1Q96P48 1450 aa27.26■■□□□ 1.95
SRRM2-220ENST00000574593 KIF27Q86VH2 1401 aa27.19■■□□□ 1.94
SRRM2-220ENST00000574593 CEP170Q5SW79 1584 aa27.19■■□□□ 1.94
SRRM2-220ENST00000574593 NUP160Q12769 1436 aa27.19■■□□□ 1.94
SRRM2-220ENST00000574593 IGF1RP08069 1367 aa27.07■■□□□ 1.92
SRRM2-220ENST00000574593 CUL7Q14999 1698 aa27.07■■□□□ 1.92
SRRM2-220ENST00000574593 SHROOM2Q13796 1616 aa27.01■■□□□ 1.92
SRRM2-220ENST00000574593 ERCC6L2Q5T890 1561 aa27■■□□□ 1.91
SRRM2-220ENST00000574593 RUSC2Q8N2Y8 1516 aa26.98■■□□□ 1.91
SRRM2-220ENST00000574593 CARMIL1Q5VZK9 1371 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms