RNA–Protein interactions for RNA: ENST00000452814.5

RAB11FIP3-206, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 5

Gene RAB11FIP3, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-206ENST00000452814 NISCHQ9Y2I1 1504 aa39.36■■■■□ 3.89
RAB11FIP3-206ENST00000452814 CCDC180Q9P1Z9 1646 aa35.34■■■■□ 3.25
RAB11FIP3-206ENST00000452814 ABCC9O60706 1549 aa35.32■■■■□ 3.24
RAB11FIP3-206ENST00000452814 RB1CC1Q8TDY2 1594 aa33.66■■■□□ 2.98
RAB11FIP3-206ENST00000452814 NACADO15069 1562 aa33.44■■■□□ 2.94
RAB11FIP3-206ENST00000452814 DNAJC5BQ9UF47 199 aa33.19■■■□□ 2.9
RAB11FIP3-206ENST00000452814 DCAF8L2P0C7V8 631 aa33.18■■■□□ 2.9
RAB11FIP3-206ENST00000452814 MYO15BQ96JP2 1530 aa33.02■■■□□ 2.88
RAB11FIP3-206ENST00000452814 PABPN1Q86U42 306 aaKnown RBP eCLIP32.88■■■□□ 2.851e-8■■■■■ 32.8
RAB11FIP3-206ENST00000452814 UNC13AQ9UPW8 1703 aa32.82■■■□□ 2.85
RAB11FIP3-206ENST00000452814 BICRAQ9NZM4 1560 aa32.66■■■□□ 2.82
RAB11FIP3-206ENST00000452814 ZCCHC6Q5VYS8 1495 aaKnown RBP32.61■■■□□ 2.81
RAB11FIP3-206ENST00000452814 DCAF1Q9Y4B6 1507 aa32.56■■■□□ 2.8
RAB11FIP3-206ENST00000452814 SHROOM4Q9ULL8 1493 aa32.3■■■□□ 2.76
RAB11FIP3-206ENST00000452814 SCRIBQ14160 1630 aa32.13■■■□□ 2.73
RAB11FIP3-206ENST00000452814 CC2D2AQ9P2K1 1620 aa31.93■■■□□ 2.7
RAB11FIP3-206ENST00000452814 EIF4G1Q04637 1599 aaKnown RBP31.86■■■□□ 2.69
RAB11FIP3-206ENST00000452814 CECR2Q9BXF3 1484 aa31.85■■■□□ 2.69
RAB11FIP3-206ENST00000452814 NCAPD3P42695 1498 aa30.89■■■□□ 2.53
RAB11FIP3-206ENST00000452814 ATAD2BQ9ULI0 1458 aa30.75■■■□□ 2.51
RAB11FIP3-206ENST00000452814 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
RAB11FIP3-206ENST00000452814 SMARCA2P51531 1590 aa30.68■■■□□ 2.5
RAB11FIP3-206ENST00000452814 HMGXB3Q12766 1538 aa30.63■■■□□ 2.49
RAB11FIP3-206ENST00000452814 DNAJC5Q9H3Z4 198 aa30.56■■■□□ 2.48
RAB11FIP3-206ENST00000452814 BAZ1AQ9NRL2 1556 aaPredicted RBP30.56■■■□□ 2.48
RAB11FIP3-206ENST00000452814 CUX2O14529 1486 aa30.52■■■□□ 2.48
RAB11FIP3-206ENST00000452814 ERCC6Q03468 1493 aa30.52■■■□□ 2.48
RAB11FIP3-206ENST00000452814 PEG3Q9GZU2 1588 aa30.45■■■□□ 2.46
RAB11FIP3-206ENST00000452814 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
RAB11FIP3-206ENST00000452814 NESP48681 1621 aa30.33■■■□□ 2.45
RAB11FIP3-206ENST00000452814 MROH2BQ7Z745 1585 aa30.29■■■□□ 2.44
RAB11FIP3-206ENST00000452814 LAMC3Q9Y6N6 1575 aa30.17■■■□□ 2.42
RAB11FIP3-206ENST00000452814 THOC2Q8NI27 1593 aaKnown RBP30.04■■■□□ 2.4
RAB11FIP3-206ENST00000452814 PDS5BQ9NTI5 1447 aa30.02■■■□□ 2.4
RAB11FIP3-206ENST00000452814 CADPSQ9ULU8 1353 aa29.93■■■□□ 2.38
RAB11FIP3-206ENST00000452814 KIF21AQ7Z4S6 1674 aa29.92■■■□□ 2.38
RAB11FIP3-206ENST00000452814 WIZO95785 1651 aa29.91■■■□□ 2.38
RAB11FIP3-206ENST00000452814 MRC2Q9UBG0 1479 aa29.73■■■□□ 2.35
RAB11FIP3-206ENST00000452814 RSF1Q96T23 1441 aaPredicted RBP29.69■■■□□ 2.34
RAB11FIP3-206ENST00000452814 WDR62O43379 1518 aa29.66■■■□□ 2.34
RAB11FIP3-206ENST00000452814 CEP164Q9UPV0 1460 aa29.6■■■□□ 2.33
RAB11FIP3-206ENST00000452814 CFTRP13569 1480 aa29.58■■■□□ 2.33
RAB11FIP3-206ENST00000452814 TOP2AP11388 1531 aaKnown RBP29.57■■■□□ 2.32
RAB11FIP3-206ENST00000452814 FANCD2Q9BXW9 1451 aa29.56■■■□□ 2.32
RAB11FIP3-206ENST00000452814 URB2Q14146 1524 aaKnown RBP29.31■■■□□ 2.28
RAB11FIP3-206ENST00000452814 CCDC88BA6NC98 1476 aa29.24■■■□□ 2.27
RAB11FIP3-206ENST00000452814 PRDM2Q13029 1718 aa29.23■■■□□ 2.27
RAB11FIP3-206ENST00000452814 OSCARQ8IYS5 282 aa29.13■■■□□ 2.25
RAB11FIP3-206ENST00000452814 TRIM41Q8WV44 630 aa29.12■■■□□ 2.25
RAB11FIP3-206ENST00000452814 IFT140Q96RY7 1462 aa29.03■■■□□ 2.24
RAB11FIP3-206ENST00000452814 ABCC8Q09428 1581 aa29■■■□□ 2.23
RAB11FIP3-206ENST00000452814 TOPBP1Q92547 1522 aa28.99■■■□□ 2.23
RAB11FIP3-206ENST00000452814 ZNF608Q9ULD9 1512 aaPredicted RBP28.94■■■□□ 2.22
RAB11FIP3-206ENST00000452814 DNMBPQ6XZF7 1577 aa28.88■■■□□ 2.21
RAB11FIP3-206ENST00000452814 EIF4G3O43432 1585 aaKnown RBP28.78■■■□□ 2.2
RAB11FIP3-206ENST00000452814 TARBP1Q13395 1621 aaKnown RBP28.74■■■□□ 2.19
RAB11FIP3-206ENST00000452814 RIMBP3CA6NJZ7 1639 aa28.69■■■□□ 2.18
RAB11FIP3-206ENST00000452814 RIMBP3BA6NNM3 1639 aa28.69■■■□□ 2.18
RAB11FIP3-206ENST00000452814 RIMBP3Q9UFD9 1639 aa28.69■■■□□ 2.18
RAB11FIP3-206ENST00000452814 POLA1P09884 1462 aaPredicted RBP28.69■■■□□ 2.18
RAB11FIP3-206ENST00000452814 AQRO60306 1485 aaKnown RBP eCLIP28.68■■■□□ 2.181e-6■■□□□ 14.5
RAB11FIP3-206ENST00000452814 ARHGEF11O15085 1522 aa28.62■■■□□ 2.17
RAB11FIP3-206ENST00000452814 SOGA1O94964 1423 aa28.59■■■□□ 2.17
RAB11FIP3-206ENST00000452814 RAD54L2Q9Y4B4 1467 aa28.57■■■□□ 2.16
RAB11FIP3-206ENST00000452814 CHD1O14646 1710 aa28.54■■■□□ 2.16
RAB11FIP3-206ENST00000452814 TDRD9Q8NDG6 1382 aaKnown RBP28.5■■■□□ 2.15
RAB11FIP3-206ENST00000452814 FGD5Q6ZNL6 1462 aa28.5■■■□□ 2.15
RAB11FIP3-206ENST00000452814 WDR97A6NE52 1622 aa28.5■■■□□ 2.15
RAB11FIP3-206ENST00000452814 FBLN2P98095 1184 aa28.49■■■□□ 2.15
RAB11FIP3-206ENST00000452814 CUX1P39880 1505 aa28.47■■■□□ 2.15
RAB11FIP3-206ENST00000452814 CYB5RLQ6IPT4 315 aa28.41■■■□□ 2.14
RAB11FIP3-206ENST00000452814 SNAPC4Q5SXM2 1469 aa28.39■■■□□ 2.13
RAB11FIP3-206ENST00000452814 MAGI1Q96QZ7 1491 aaPredicted RBP28.36■■■□□ 2.13
RAB11FIP3-206ENST00000452814 GRIN2BQ13224 1484 aa28.34■■■□□ 2.13
RAB11FIP3-206ENST00000452814 ARAP1Q96P48 1450 aa28.33■■■□□ 2.13
RAB11FIP3-206ENST00000452814 CHMP7Q8WUX9 453 aaPredicted RBP28.32■■■□□ 2.12
RAB11FIP3-206ENST00000452814 SUPT5HO00267 1087 aaKnown RBP28.28■■■□□ 2.12
RAB11FIP3-206ENST00000452814 CLASP1Q7Z460 1538 aa28.28■■■□□ 2.12
RAB11FIP3-206ENST00000452814 SYNJ2O15056 1496 aa28.26■■■□□ 2.11
RAB11FIP3-206ENST00000452814 SYNJ1O43426 1573 aa28.25■■■□□ 2.11
RAB11FIP3-206ENST00000452814 GAPVD1Q14C86 1478 aa28.22■■■□□ 2.11
RAB11FIP3-206ENST00000452814 ABCA10Q8WWZ4 1543 aa28.21■■■□□ 2.11
RAB11FIP3-206ENST00000452814 PBRM1Q86U86 1689 aa28.16■■■□□ 2.1
RAB11FIP3-206ENST00000452814 ABCA5Q8WWZ7 1642 aa28.14■■■□□ 2.1
RAB11FIP3-206ENST00000452814 WRNQ14191 1432 aaPredicted RBP eCLIP28.1■■■□□ 2.09
RAB11FIP3-206ENST00000452814 TRHP20396 242 aaPredicted RBP28.1■■■□□ 2.09
RAB11FIP3-206ENST00000452814 TOP2BQ02880 1626 aa28.02■■■□□ 2.08
RAB11FIP3-206ENST00000452814 BIVM-ERCC5R4GMW8 1640 aa28.01■■■□□ 2.07
RAB11FIP3-206ENST00000452814 GRIN2AQ12879 1464 aa27.96■■■□□ 2.07
RAB11FIP3-206ENST00000452814 ADAMTS12P58397 1594 aa27.92■■■□□ 2.06
RAB11FIP3-206ENST00000452814 FHAD1B1AJZ9 1412 aa27.89■■■□□ 2.06
RAB11FIP3-206ENST00000452814 NUP160Q12769 1436 aa27.89■■■□□ 2.06
RAB11FIP3-206ENST00000452814 ERICH3Q5RHP9 1530 aa27.86■■■□□ 2.05
RAB11FIP3-206ENST00000452814 CEP170Q5SW79 1584 aa27.85■■■□□ 2.05
RAB11FIP3-206ENST00000452814 ERCC6L2Q5T890 1561 aa27.78■■■□□ 2.04
RAB11FIP3-206ENST00000452814 SHROOM2Q13796 1616 aa27.76■■■□□ 2.03
RAB11FIP3-206ENST00000452814 PRG4Q92954 1404 aaPredicted RBP27.61■■■□□ 2.01
RAB11FIP3-206ENST00000452814 JPH4Q96JJ6 628 aa27.61■■■□□ 2.01
RAB11FIP3-206ENST00000452814 RUSC2Q8N2Y8 1516 aa27.53■■■□□ 2
RAB11FIP3-206ENST00000452814 IGF1RP08069 1367 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms