RNA–Protein interactions for RNA: ENST00000496582.5

RPL35A-209, Transcript of ribosomal protein L35a, humanhuman

TSL 2

Gene RPL35A, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-209ENST00000496582 NISCHQ9Y2I1 1504 aa17.05■□□□□ 0.32
RPL35A-209ENST00000496582 ABCC9O60706 1549 aa15.68■□□□□ 0.1
RPL35A-209ENST00000496582 CCDC180Q9P1Z9 1646 aa15.61■□□□□ 0.09
RPL35A-209ENST00000496582 RB1CC1Q8TDY2 1594 aa14.99□□□□□ -0.01
RPL35A-209ENST00000496582 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
RPL35A-209ENST00000496582 NACADO15069 1562 aa14.83□□□□□ -0.04
RPL35A-209ENST00000496582 MYO15BQ96JP2 1530 aa14.61□□□□□ -0.07
RPL35A-209ENST00000496582 UNC13AQ9UPW8 1703 aa14.55□□□□□ -0.08
RPL35A-209ENST00000496582 SHROOM4Q9ULL8 1493 aa14.5□□□□□ -0.09
RPL35A-209ENST00000496582 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
RPL35A-209ENST00000496582 BICRAQ9NZM4 1560 aa14.44□□□□□ -0.1
RPL35A-209ENST00000496582 DCAF8L2P0C7V8 631 aa14.34□□□□□ -0.11
RPL35A-209ENST00000496582 CECR2Q9BXF3 1484 aa14.26□□□□□ -0.13
RPL35A-209ENST00000496582 DNAJC5Q9H3Z4 198 aa14.25□□□□□ -0.13
RPL35A-209ENST00000496582 CC2D2AQ9P2K1 1620 aa14.25□□□□□ -0.13
RPL35A-209ENST00000496582 DCAF1Q9Y4B6 1507 aa14.22□□□□□ -0.13
RPL35A-209ENST00000496582 EIF4G1Q04637 1599 aaKnown RBP14.16□□□□□ -0.14
RPL35A-209ENST00000496582 ZCCHC6Q5VYS8 1495 aaKnown RBP14.04□□□□□ -0.16
RPL35A-209ENST00000496582 SCRIBQ14160 1630 aa13.93□□□□□ -0.18
RPL35A-209ENST00000496582 CUX2O14529 1486 aa13.91□□□□□ -0.18
RPL35A-209ENST00000496582 ERCC6Q03468 1493 aa13.67□□□□□ -0.22
RPL35A-209ENST00000496582 NCAPD3P42695 1498 aa13.65□□□□□ -0.22
RPL35A-209ENST00000496582 AEBP2Q6ZN18 517 aaPredicted RBP13.55□□□□□ -0.24
RPL35A-209ENST00000496582 HMGXB3Q12766 1538 aa13.54□□□□□ -0.24
RPL35A-209ENST00000496582 SMARCA2P51531 1590 aa13.52□□□□□ -0.25
RPL35A-209ENST00000496582 ATAD2BQ9ULI0 1458 aa13.47□□□□□ -0.25
RPL35A-209ENST00000496582 LAMC3Q9Y6N6 1575 aa13.44□□□□□ -0.26
RPL35A-209ENST00000496582 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
RPL35A-209ENST00000496582 SMARCA4P51532 1647 aa13.37□□□□□ -0.27
RPL35A-209ENST00000496582 PEG3Q9GZU2 1588 aa13.36□□□□□ -0.27
RPL35A-209ENST00000496582 PDS5BQ9NTI5 1447 aa13.35□□□□□ -0.27
RPL35A-209ENST00000496582 NESP48681 1621 aa13.33□□□□□ -0.28
RPL35A-209ENST00000496582 BAZ1BQ9UIG0 1483 aaKnown RBP13.33□□□□□ -0.28
RPL35A-209ENST00000496582 BAZ1AQ9NRL2 1556 aaPredicted RBP13.32□□□□□ -0.28
RPL35A-209ENST00000496582 TRIM41Q8WV44 630 aa13.26□□□□□ -0.29
RPL35A-209ENST00000496582 KIF21AQ7Z4S6 1674 aa13.25□□□□□ -0.29
RPL35A-209ENST00000496582 MRC2Q9UBG0 1479 aa13.19□□□□□ -0.3
RPL35A-209ENST00000496582 WDR62O43379 1518 aa13.18□□□□□ -0.3
RPL35A-209ENST00000496582 CADPSQ9ULU8 1353 aa13.17□□□□□ -0.3
RPL35A-209ENST00000496582 OSCARQ8IYS5 282 aa13.15□□□□□ -0.3
RPL35A-209ENST00000496582 CEP164Q9UPV0 1460 aa13.06□□□□□ -0.32
RPL35A-209ENST00000496582 MROH2BQ7Z745 1585 aa13.03□□□□□ -0.32
RPL35A-209ENST00000496582 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
RPL35A-209ENST00000496582 CFTRP13569 1480 aa12.96□□□□□ -0.34
RPL35A-209ENST00000496582 CHIC1Q5VXU3 224 aa12.95□□□□□ -0.34
RPL35A-209ENST00000496582 RIMBP3CA6NJZ7 1639 aa12.95□□□□□ -0.34
RPL35A-209ENST00000496582 RIMBP3BA6NNM3 1639 aa12.95□□□□□ -0.34
RPL35A-209ENST00000496582 RIMBP3Q9UFD9 1639 aa12.95□□□□□ -0.34
RPL35A-209ENST00000496582 PRDM2Q13029 1718 aa12.88□□□□□ -0.35
RPL35A-209ENST00000496582 ARHGEF11O15085 1522 aa12.88□□□□□ -0.35
RPL35A-209ENST00000496582 RSF1Q96T23 1441 aaPredicted RBP12.87□□□□□ -0.35
RPL35A-209ENST00000496582 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
RPL35A-209ENST00000496582 WIZO95785 1651 aa12.85□□□□□ -0.35
RPL35A-209ENST00000496582 URB2Q14146 1524 aaKnown RBP12.84□□□□□ -0.35
RPL35A-209ENST00000496582 ABCC8Q09428 1581 aa12.84□□□□□ -0.35
RPL35A-209ENST00000496582 TOP2AP11388 1531 aaKnown RBP12.76□□□□□ -0.37
RPL35A-209ENST00000496582 CYB5RLQ6IPT4 315 aa12.73□□□□□ -0.37
RPL35A-209ENST00000496582 TRHP20396 242 aaPredicted RBP12.71□□□□□ -0.37
RPL35A-209ENST00000496582 EIF4G3O43432 1585 aaKnown RBP12.7□□□□□ -0.38
RPL35A-209ENST00000496582 ZNF608Q9ULD9 1512 aaPredicted RBP12.69□□□□□ -0.38
RPL35A-209ENST00000496582 WDR97A6NE52 1622 aa12.69□□□□□ -0.38
RPL35A-209ENST00000496582 TOPBP1Q92547 1522 aa12.68□□□□□ -0.38
RPL35A-209ENST00000496582 ARAP1Q96P48 1450 aa12.68□□□□□ -0.38
RPL35A-209ENST00000496582 CHD1O14646 1710 aa12.68□□□□□ -0.38
RPL35A-209ENST00000496582 DNMBPQ6XZF7 1577 aa12.66□□□□□ -0.38
RPL35A-209ENST00000496582 TARBP1Q13395 1621 aaKnown RBP12.62□□□□□ -0.39
RPL35A-209ENST00000496582 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
RPL35A-209ENST00000496582 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
RPL35A-209ENST00000496582 SYNJ1O43426 1573 aa12.57□□□□□ -0.4
RPL35A-209ENST00000496582 CLASP1Q7Z460 1538 aa12.56□□□□□ -0.4
RPL35A-209ENST00000496582 AQRO60306 1485 aaKnown RBP eCLIP12.54□□□□□ -0.4not detected■■■■■ 35.2
RPL35A-209ENST00000496582 MAGI1Q96QZ7 1491 aaPredicted RBP12.54□□□□□ -0.4
RPL35A-209ENST00000496582 FBLN2P98095 1184 aa12.52□□□□□ -0.41
RPL35A-209ENST00000496582 POLA1P09884 1462 aaPredicted RBP12.52□□□□□ -0.41
RPL35A-209ENST00000496582 SOGA1O94964 1423 aa12.47□□□□□ -0.41
RPL35A-209ENST00000496582 CHMP7Q8WUX9 453 aaPredicted RBP12.47□□□□□ -0.41
RPL35A-209ENST00000496582 SYNJ2O15056 1496 aa12.46□□□□□ -0.41
RPL35A-209ENST00000496582 GRIN2BQ13224 1484 aa12.46□□□□□ -0.42
RPL35A-209ENST00000496582 SNAPC4Q5SXM2 1469 aa12.44□□□□□ -0.42
RPL35A-209ENST00000496582 GAPVD1Q14C86 1478 aa12.43□□□□□ -0.42
RPL35A-209ENST00000496582 TDRD9Q8NDG6 1382 aaKnown RBP12.41□□□□□ -0.42
RPL35A-209ENST00000496582 RAD54L2Q9Y4B4 1467 aa12.37□□□□□ -0.43
RPL35A-209ENST00000496582 FGD5Q6ZNL6 1462 aa12.36□□□□□ -0.43
RPL35A-209ENST00000496582 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
RPL35A-209ENST00000496582 KIF13AQ9H1H9 1805 aa12.3□□□□□ -0.44
RPL35A-209ENST00000496582 ABCA10Q8WWZ4 1543 aa12.29□□□□□ -0.44
RPL35A-209ENST00000496582 SHROOM2Q13796 1616 aa12.28□□□□□ -0.44
RPL35A-209ENST00000496582 ABCA5Q8WWZ7 1642 aa12.28□□□□□ -0.44
RPL35A-209ENST00000496582 CUX1P39880 1505 aa12.27□□□□□ -0.44
RPL35A-209ENST00000496582 NUP160Q12769 1436 aa12.27□□□□□ -0.45
RPL35A-209ENST00000496582 GRIN2AQ12879 1464 aa12.26□□□□□ -0.45
RPL35A-209ENST00000496582 CEP170Q5SW79 1584 aa12.26□□□□□ -0.45
RPL35A-209ENST00000496582 MAPKBP1O60336 1514 aa12.21□□□□□ -0.45
RPL35A-209ENST00000496582 ABCC10Q5T3U5 1492 aa12.2□□□□□ -0.46
RPL35A-209ENST00000496582 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
RPL35A-209ENST00000496582 ADAMTS12P58397 1594 aa12.19□□□□□ -0.46
RPL35A-209ENST00000496582 ERICH3Q5RHP9 1530 aa12.18□□□□□ -0.46
RPL35A-209ENST00000496582 NPM1P06748 294 aaKnown RBP eCLIP12.18□□□□□ -0.46
RPL35A-209ENST00000496582 WRNQ14191 1432 aaPredicted RBP eCLIP12.17□□□□□ -0.46
RPL35A-209ENST00000496582 ERCC6L2Q5T890 1561 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms