RNA–Protein interactions for RNA: ENST00000485324.1

SLC6A8-210, Transcript of solute carrier family 6 member 8, humanhuman

TSL 2

Gene SLC6A8, Length 2,401 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-210ENST00000485324 NISCHQ9Y2I1 1504 aa42.7■■■■■ 4.43
SLC6A8-210ENST00000485324 SHROOM4Q9ULL8 1493 aa36.38■■■■□ 3.41
SLC6A8-210ENST00000485324 CCDC180Q9P1Z9 1646 aa36.34■■■■□ 3.41
SLC6A8-210ENST00000485324 ZCCHC6Q5VYS8 1495 aaKnown RBP36.09■■■■□ 3.37
SLC6A8-210ENST00000485324 SUPT5HO00267 1087 aaKnown RBP35.57■■■■□ 3.29
SLC6A8-210ENST00000485324 DCAF8L2P0C7V8 631 aa35.49■■■■□ 3.27
SLC6A8-210ENST00000485324 DCAF1Q9Y4B6 1507 aa34.98■■■■□ 3.19
SLC6A8-210ENST00000485324 CHIC1Q5VXU3 224 aa34.5■■■■□ 3.11
SLC6A8-210ENST00000485324 MYO15BQ96JP2 1530 aa34.4■■■■□ 3.1
SLC6A8-210ENST00000485324 SCRIBQ14160 1630 aa34.12■■■■□ 3.05
SLC6A8-210ENST00000485324 ABCC9O60706 1549 aa34.03■■■■□ 3.04
SLC6A8-210ENST00000485324 RSF1Q96T23 1441 aaPredicted RBP33.75■■■□□ 2.99
SLC6A8-210ENST00000485324 NACADO15069 1562 aa33.63■■■□□ 2.97
SLC6A8-210ENST00000485324 LOC105371045A0A1W2PR82 267 aa33.52■■■□□ 2.96
SLC6A8-210ENST00000485324 RB1CC1Q8TDY2 1594 aa33.42■■■□□ 2.94
SLC6A8-210ENST00000485324 CECR2Q9BXF3 1484 aa33.38■■■□□ 2.93
SLC6A8-210ENST00000485324 PCGF6Q9BYE7 350 aa33.28■■■□□ 2.92
SLC6A8-210ENST00000485324 MROH2BQ7Z745 1585 aa33.24■■■□□ 2.91
SLC6A8-210ENST00000485324 HRCP23327 699 aa33.14■■■□□ 2.9
SLC6A8-210ENST00000485324 TRIM41Q8WV44 630 aa33.09■■■□□ 2.89
SLC6A8-210ENST00000485324 WIZO95785 1651 aa33.07■■■□□ 2.88
SLC6A8-210ENST00000485324 FAM9AQ8IZU1 332 aaPredicted RBP32.9■■■□□ 2.86
SLC6A8-210ENST00000485324 BAZ1AQ9NRL2 1556 aaPredicted RBP32.79■■■□□ 2.84
SLC6A8-210ENST00000485324 UNC13AQ9UPW8 1703 aa32.74■■■□□ 2.83
SLC6A8-210ENST00000485324 EHMT2Q96KQ7 1210 aa32.67■■■□□ 2.82
SLC6A8-210ENST00000485324 TRIM26Q12899 539 aaPredicted RBP32.62■■■□□ 2.81
SLC6A8-210ENST00000485324 PPARGC1BQ86YN6 1023 aaKnown RBP32.59■■■□□ 2.81
SLC6A8-210ENST00000485324 SMARCA4P51532 1647 aa32.57■■■□□ 2.8
SLC6A8-210ENST00000485324 EIF4G1Q04637 1599 aaKnown RBP32.54■■■□□ 2.8
SLC6A8-210ENST00000485324 TOP2AP11388 1531 aaKnown RBP32.48■■■□□ 2.79
SLC6A8-210ENST00000485324 PABPN1Q86U42 306 aaKnown RBP eCLIP32.39■■■□□ 2.787e-11■□□□□ 9.9
SLC6A8-210ENST00000485324 CCDC88BA6NC98 1476 aa32.38■■■□□ 2.77
SLC6A8-210ENST00000485324 SMARCA2P51531 1590 aa32.33■■■□□ 2.77
SLC6A8-210ENST00000485324 BICRAQ9NZM4 1560 aa32.31■■■□□ 2.76
SLC6A8-210ENST00000485324 ABCC8Q09428 1581 aa32.29■■■□□ 2.76
SLC6A8-210ENST00000485324 SOGA1O94964 1423 aa31.94■■■□□ 2.7
SLC6A8-210ENST00000485324 PEG3Q9GZU2 1588 aa31.91■■■□□ 2.7
SLC6A8-210ENST00000485324 RUSC2Q8N2Y8 1516 aa31.82■■■□□ 2.68
SLC6A8-210ENST00000485324 ATAD2BQ9ULI0 1458 aa31.76■■■□□ 2.67
SLC6A8-210ENST00000485324 ZEB1P37275 1124 aaPredicted RBP31.75■■■□□ 2.67
SLC6A8-210ENST00000485324 WRNQ14191 1432 aaPredicted RBP eCLIP31.69■■■□□ 2.66
SLC6A8-210ENST00000485324 CEP162Q5TB80 1403 aa31.68■■■□□ 2.66
SLC6A8-210ENST00000485324 CSRNP3Q8WYN3 585 aa31.68■■■□□ 2.66
SLC6A8-210ENST00000485324 BAZ1BQ9UIG0 1483 aaKnown RBP31.65■■■□□ 2.66
SLC6A8-210ENST00000485324 EEA1Q15075 1411 aa31.62■■■□□ 2.65
SLC6A8-210ENST00000485324 TNIKQ9UKE5 1360 aa31.61■■■□□ 2.65
SLC6A8-210ENST00000485324 SYNJ1O43426 1573 aa31.59■■■□□ 2.65
SLC6A8-210ENST00000485324 TTBK1Q5TCY1 1321 aaPredicted RBP31.57■■■□□ 2.64
SLC6A8-210ENST00000485324 UBTFP17480 764 aaKnown RBP31.56■■■□□ 2.64
SLC6A8-210ENST00000485324 GOLGA3Q08378 1498 aa31.46■■■□□ 2.63
SLC6A8-210ENST00000485324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.44■■■□□ 2.62
SLC6A8-210ENST00000485324 CEP164Q9UPV0 1460 aa31.29■■■□□ 2.6
SLC6A8-210ENST00000485324 CCER1Q8TC90 406 aaPredicted RBP31.28■■■□□ 2.6
SLC6A8-210ENST00000485324 KIF21BO75037 1637 aa31.26■■■□□ 2.59
SLC6A8-210ENST00000485324 TOP2BQ02880 1626 aa31.17■■■□□ 2.58
SLC6A8-210ENST00000485324 RAPGEF2Q9Y4G8 1499 aa31.15■■■□□ 2.58
SLC6A8-210ENST00000485324 NCAPD3P42695 1498 aa31.13■■■□□ 2.57
SLC6A8-210ENST00000485324 CLIP1P30622 1438 aa31.11■■■□□ 2.57
SLC6A8-210ENST00000485324 HMGXB3Q12766 1538 aa31.11■■■□□ 2.57
SLC6A8-210ENST00000485324 BIVM-ERCC5R4GMW8 1640 aa31.07■■■□□ 2.56
SLC6A8-210ENST00000485324 RANGAP1P46060 587 aaPredicted RBP31.05■■■□□ 2.56
SLC6A8-210ENST00000485324 VPS8Q8N3P4 1428 aa30.94■■■□□ 2.54
SLC6A8-210ENST00000485324 CUX1P39880 1505 aa30.94■■■□□ 2.54
SLC6A8-210ENST00000485324 CFTRP13569 1480 aa30.86■■■□□ 2.53
SLC6A8-210ENST00000485324 PRXQ9BXM0 1461 aa30.82■■■□□ 2.52
SLC6A8-210ENST00000485324 HNRNPUL2Q1KMD3 747 aaKnown RBP30.81■■■□□ 2.52
SLC6A8-210ENST00000485324 ERICH3Q5RHP9 1530 aa30.77■■■□□ 2.52
SLC6A8-210ENST00000485324 APLP2Q06481 763 aa30.76■■■□□ 2.51
SLC6A8-210ENST00000485324 KIF27Q86VH2 1401 aa30.7■■■□□ 2.51
SLC6A8-210ENST00000485324 ARAP1Q96P48 1450 aa30.66■■■□□ 2.5
SLC6A8-210ENST00000485324 PRDM2Q13029 1718 aa30.62■■■□□ 2.49
SLC6A8-210ENST00000485324 DIEXFQ68CQ4 756 aaKnown RBP30.57■■■□□ 2.48
SLC6A8-210ENST00000485324 CADPSQ9ULU8 1353 aa30.54■■■□□ 2.48
SLC6A8-210ENST00000485324 KANK4Q5T7N3 995 aaPredicted RBP30.51■■■□□ 2.47
SLC6A8-210ENST00000485324 CC2D2AQ9P2K1 1620 aa30.49■■■□□ 2.47
SLC6A8-210ENST00000485324 CUX2O14529 1486 aa30.48■■■□□ 2.47
SLC6A8-210ENST00000485324 SCAF1Q9H7N4 1312 aaKnown RBP30.47■■■□□ 2.47
SLC6A8-210ENST00000485324 ARHGAP35Q9NRY4 1499 aa30.42■■■□□ 2.46
SLC6A8-210ENST00000485324 IGF1RP08069 1367 aa30.42■■■□□ 2.46
SLC6A8-210ENST00000485324 FGD5Q6ZNL6 1462 aa30.4■■■□□ 2.46
SLC6A8-210ENST00000485324 ZNF316A6NFI3 1004 aaPredicted RBP30.38■■■□□ 2.45
SLC6A8-210ENST00000485324 CARMIL1Q5VZK9 1371 aa30.28■■■□□ 2.44
SLC6A8-210ENST00000485324 FANCD2Q9BXW9 1451 aa30.27■■■□□ 2.44
SLC6A8-210ENST00000485324 NEUROD1Q13562 356 aa30.23■■■□□ 2.43
SLC6A8-210ENST00000485324 RRBP1Q9P2E9 1410 aaKnown RBP30.2■■■□□ 2.42
SLC6A8-210ENST00000485324 ACIN1Q9UKV3 1341 aaKnown RBP30.19■■■□□ 2.42
SLC6A8-210ENST00000485324 NESP48681 1621 aa30.18■■■□□ 2.42
SLC6A8-210ENST00000485324 DHX57Q6P158 1386 aaKnown RBP30.15■■■□□ 2.42
SLC6A8-210ENST00000485324 RAD54L2Q9Y4B4 1467 aa30.15■■■□□ 2.42
SLC6A8-210ENST00000485324 DNMBPQ6XZF7 1577 aa30.09■■■□□ 2.41
SLC6A8-210ENST00000485324 CCNB3Q8WWL7 1395 aa30.09■■■□□ 2.41
SLC6A8-210ENST00000485324 TOPBP1Q92547 1522 aa30.07■■■□□ 2.4
SLC6A8-210ENST00000485324 ITGAEP38570 1179 aa30.06■■■□□ 2.4
SLC6A8-210ENST00000485324 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
SLC6A8-210ENST00000485324 P3H3Q8IVL6 736 aa30.05■■■□□ 2.4
SLC6A8-210ENST00000485324 TIAM1Q13009 1591 aa30.04■■■□□ 2.4
SLC6A8-210ENST00000485324 ABCA10Q8WWZ4 1543 aa30.01■■■□□ 2.39
SLC6A8-210ENST00000485324 CENPBP07199 599 aaPredicted RBP29.98■■■□□ 2.39
SLC6A8-210ENST00000485324 MIER1Q8N108 512 aa29.98■■■□□ 2.39
SLC6A8-210ENST00000485324 CLSPNQ9HAW4 1339 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms