RNA–Protein interactions for RNA: ENST00000448864.5

RPL35A-205, Transcript of ribosomal protein L35a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL35A, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-205ENST00000448864 NISCHQ9Y2I1 1504 aa36.05■■■■□ 3.36
RPL35A-205ENST00000448864 CCDC180Q9P1Z9 1646 aa32.13■■■□□ 2.73
RPL35A-205ENST00000448864 ABCC9O60706 1549 aa31.57■■■□□ 2.64
RPL35A-205ENST00000448864 RB1CC1Q8TDY2 1594 aa30.36■■■□□ 2.45
RPL35A-205ENST00000448864 NACADO15069 1562 aa30.29■■■□□ 2.44
RPL35A-205ENST00000448864 DCAF8L2P0C7V8 631 aa30.23■■■□□ 2.43
RPL35A-205ENST00000448864 MYO15BQ96JP2 1530 aa30.08■■■□□ 2.41
RPL35A-205ENST00000448864 ZCCHC6Q5VYS8 1495 aaKnown RBP29.95■■■□□ 2.39
RPL35A-205ENST00000448864 DCAF1Q9Y4B6 1507 aa29.86■■■□□ 2.37
RPL35A-205ENST00000448864 UNC13AQ9UPW8 1703 aa29.56■■■□□ 2.32
RPL35A-205ENST00000448864 PABPN1Q86U42 306 aaKnown RBP eCLIP29.5■■■□□ 2.31
RPL35A-205ENST00000448864 BICRAQ9NZM4 1560 aa29.37■■■□□ 2.29
RPL35A-205ENST00000448864 SCRIBQ14160 1630 aa29.22■■■□□ 2.27
RPL35A-205ENST00000448864 SHROOM4Q9ULL8 1493 aa29.17■■■□□ 2.26
RPL35A-205ENST00000448864 DNAJC5BQ9UF47 199 aa29.16■■■□□ 2.26
RPL35A-205ENST00000448864 EIF4G1Q04637 1599 aaKnown RBP28.63■■■□□ 2.17
RPL35A-205ENST00000448864 CC2D2AQ9P2K1 1620 aa28.55■■■□□ 2.16
RPL35A-205ENST00000448864 CECR2Q9BXF3 1484 aa28.43■■■□□ 2.14
RPL35A-205ENST00000448864 SMARCA4P51532 1647 aa27.98■■■□□ 2.07
RPL35A-205ENST00000448864 BAZ1AQ9NRL2 1556 aaPredicted RBP27.97■■■□□ 2.07
RPL35A-205ENST00000448864 NCAPD3P42695 1498 aa27.96■■■□□ 2.07
RPL35A-205ENST00000448864 ATAD2BQ9ULI0 1458 aa27.9■■■□□ 2.06
RPL35A-205ENST00000448864 SMARCA2P51531 1590 aa27.9■■■□□ 2.06
RPL35A-205ENST00000448864 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
RPL35A-205ENST00000448864 PEG3Q9GZU2 1588 aa27.74■■■□□ 2.03
RPL35A-205ENST00000448864 MROH2BQ7Z745 1585 aa27.73■■■□□ 2.03
RPL35A-205ENST00000448864 BAZ1BQ9UIG0 1483 aaKnown RBP27.67■■■□□ 2.02
RPL35A-205ENST00000448864 WIZO95785 1651 aa27.4■■□□□ 1.98
RPL35A-205ENST00000448864 RSF1Q96T23 1441 aaPredicted RBP27.39■■□□□ 1.97
RPL35A-205ENST00000448864 ERCC6Q03468 1493 aa27.28■■□□□ 1.96
RPL35A-205ENST00000448864 NESP48681 1621 aa27.23■■□□□ 1.95
RPL35A-205ENST00000448864 LAMC3Q9Y6N6 1575 aa27.23■■□□□ 1.95
RPL35A-205ENST00000448864 TOP2AP11388 1531 aaKnown RBP27.15■■□□□ 1.94
RPL35A-205ENST00000448864 CADPSQ9ULU8 1353 aa27.14■■□□□ 1.94
RPL35A-205ENST00000448864 PDS5BQ9NTI5 1447 aa27.1■■□□□ 1.93
RPL35A-205ENST00000448864 CUX2O14529 1486 aa27.08■■□□□ 1.93
RPL35A-205ENST00000448864 CFTRP13569 1480 aa26.91■■□□□ 1.9
RPL35A-205ENST00000448864 KIF21AQ7Z4S6 1674 aa26.91■■□□□ 1.9
RPL35A-205ENST00000448864 THOC2Q8NI27 1593 aaKnown RBP26.87■■□□□ 1.89
RPL35A-205ENST00000448864 CCDC88BA6NC98 1476 aa26.84■■□□□ 1.89
RPL35A-205ENST00000448864 FANCD2Q9BXW9 1451 aa26.78■■□□□ 1.88
RPL35A-205ENST00000448864 MRC2Q9UBG0 1479 aa26.77■■□□□ 1.88
RPL35A-205ENST00000448864 CEP164Q9UPV0 1460 aa26.77■■□□□ 1.88
RPL35A-205ENST00000448864 WDR62O43379 1518 aa26.67■■□□□ 1.86
RPL35A-205ENST00000448864 PRDM2Q13029 1718 aa26.65■■□□□ 1.86
RPL35A-205ENST00000448864 SUPT5HO00267 1087 aaKnown RBP26.57■■□□□ 1.84
RPL35A-205ENST00000448864 DNAJC5Q9H3Z4 198 aa26.51■■□□□ 1.83
RPL35A-205ENST00000448864 URB2Q14146 1524 aaKnown RBP26.49■■□□□ 1.83
RPL35A-205ENST00000448864 ABCC8Q09428 1581 aa26.42■■□□□ 1.82
RPL35A-205ENST00000448864 TOPBP1Q92547 1522 aa26.32■■□□□ 1.8
RPL35A-205ENST00000448864 DNMBPQ6XZF7 1577 aa26.29■■□□□ 1.8
RPL35A-205ENST00000448864 IFT140Q96RY7 1462 aa26.25■■□□□ 1.79
RPL35A-205ENST00000448864 POLA1P09884 1462 aaPredicted RBP26.08■■□□□ 1.77
RPL35A-205ENST00000448864 ZNF608Q9ULD9 1512 aaPredicted RBP26.06■■□□□ 1.76
RPL35A-205ENST00000448864 TARBP1Q13395 1621 aaKnown RBP26.03■■□□□ 1.76
RPL35A-205ENST00000448864 SOGA1O94964 1423 aa26.03■■□□□ 1.76
RPL35A-205ENST00000448864 CUX1P39880 1505 aa26.02■■□□□ 1.76
RPL35A-205ENST00000448864 OSCARQ8IYS5 282 aa25.99■■□□□ 1.75
RPL35A-205ENST00000448864 FGD5Q6ZNL6 1462 aa25.98■■□□□ 1.75
RPL35A-205ENST00000448864 RAD54L2Q9Y4B4 1467 aa25.95■■□□□ 1.74
RPL35A-205ENST00000448864 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.74
RPL35A-205ENST00000448864 AQRO60306 1485 aaKnown RBP eCLIP25.93■■□□□ 1.741e-7■■■■■ 32.4
RPL35A-205ENST00000448864 WDR97A6NE52 1622 aa25.89■■□□□ 1.74
RPL35A-205ENST00000448864 TDRD9Q8NDG6 1382 aaKnown RBP25.87■■□□□ 1.73
RPL35A-205ENST00000448864 WRNQ14191 1432 aaPredicted RBP eCLIP25.85■■□□□ 1.73
RPL35A-205ENST00000448864 TOP2BQ02880 1626 aa25.78■■□□□ 1.72
RPL35A-205ENST00000448864 BIVM-ERCC5R4GMW8 1640 aa25.77■■□□□ 1.72
RPL35A-205ENST00000448864 ABCA10Q8WWZ4 1543 aa25.76■■□□□ 1.71
RPL35A-205ENST00000448864 GRIN2BQ13224 1484 aa25.74■■□□□ 1.71
RPL35A-205ENST00000448864 SYNJ1O43426 1573 aa25.71■■□□□ 1.71
RPL35A-205ENST00000448864 FBLN2P98095 1184 aa25.71■■□□□ 1.71
RPL35A-205ENST00000448864 GAPVD1Q14C86 1478 aa25.7■■□□□ 1.7
RPL35A-205ENST00000448864 MAGI1Q96QZ7 1491 aaPredicted RBP25.69■■□□□ 1.7
RPL35A-205ENST00000448864 SNAPC4Q5SXM2 1469 aa25.66■■□□□ 1.7
RPL35A-205ENST00000448864 CHMP7Q8WUX9 453 aaPredicted RBP25.65■■□□□ 1.7
RPL35A-205ENST00000448864 CHD1O14646 1710 aa25.65■■□□□ 1.7
RPL35A-205ENST00000448864 ABCA5Q8WWZ7 1642 aa25.62■■□□□ 1.69
RPL35A-205ENST00000448864 SYNJ2O15056 1496 aa25.59■■□□□ 1.69
RPL35A-205ENST00000448864 PBRM1Q86U86 1689 aa25.58■■□□□ 1.69
RPL35A-205ENST00000448864 TRIM41Q8WV44 630 aa25.49■■□□□ 1.67
RPL35A-205ENST00000448864 ARHGEF11O15085 1522 aa25.46■■□□□ 1.67
RPL35A-205ENST00000448864 ERICH3Q5RHP9 1530 aa25.46■■□□□ 1.67
RPL35A-205ENST00000448864 RIMBP3CA6NJZ7 1639 aa25.45■■□□□ 1.67
RPL35A-205ENST00000448864 RIMBP3BA6NNM3 1639 aa25.45■■□□□ 1.67
RPL35A-205ENST00000448864 RIMBP3Q9UFD9 1639 aa25.45■■□□□ 1.67
RPL35A-205ENST00000448864 FHAD1B1AJZ9 1412 aa25.42■■□□□ 1.66
RPL35A-205ENST00000448864 CLASP1Q7Z460 1538 aa25.4■■□□□ 1.66
RPL35A-205ENST00000448864 ADAMTS12P58397 1594 aa25.39■■□□□ 1.65
RPL35A-205ENST00000448864 GRIN2AQ12879 1464 aa25.38■■□□□ 1.65
RPL35A-205ENST00000448864 KIF27Q86VH2 1401 aa25.37■■□□□ 1.65
RPL35A-205ENST00000448864 CYB5RLQ6IPT4 315 aa25.29■■□□□ 1.64
RPL35A-205ENST00000448864 NUP160Q12769 1436 aa25.28■■□□□ 1.64
RPL35A-205ENST00000448864 IGF1RP08069 1367 aa25.27■■□□□ 1.64
RPL35A-205ENST00000448864 ARAP1Q96P48 1450 aa25.21■■□□□ 1.63
RPL35A-205ENST00000448864 CEP170Q5SW79 1584 aa25.2■■□□□ 1.62
RPL35A-205ENST00000448864 CUL7Q14999 1698 aa25.17■■□□□ 1.62
RPL35A-205ENST00000448864 CARMIL1Q5VZK9 1371 aa25.12■■□□□ 1.61
RPL35A-205ENST00000448864 SHROOM2Q13796 1616 aa25.08■■□□□ 1.61
RPL35A-205ENST00000448864 JPH4Q96JJ6 628 aa25.08■■□□□ 1.61
RPL35A-205ENST00000448864 KIAA0586Q9BVV6 1533 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms