RNA–Protein interactions for RNA: ENST00000450428.5

RAB11FIP3-205, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2 BASIC

Gene RAB11FIP3, Length 3,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-205ENST00000450428 NISCHQ9Y2I1 1504 aa23.93■■□□□ 1.42
RAB11FIP3-205ENST00000450428 DCAF8L2P0C7V8 631 aa20.55■□□□□ 0.88
RAB11FIP3-205ENST00000450428 SHROOM4Q9ULL8 1493 aa20.52■□□□□ 0.88
RAB11FIP3-205ENST00000450428 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
RAB11FIP3-205ENST00000450428 PPARGC1BQ86YN6 1023 aaKnown RBP20.31■□□□□ 0.84
RAB11FIP3-205ENST00000450428 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
RAB11FIP3-205ENST00000450428 HRCP23327 699 aa20.25■□□□□ 0.83
RAB11FIP3-205ENST00000450428 PCGF6Q9BYE7 350 aa20.19■□□□□ 0.82
RAB11FIP3-205ENST00000450428 ZCCHC6Q5VYS8 1495 aaKnown RBP20.11■□□□□ 0.81
RAB11FIP3-205ENST00000450428 ABCC9O60706 1549 aa19.54■□□□□ 0.72
RAB11FIP3-205ENST00000450428 MYO15BQ96JP2 1530 aa19.53■□□□□ 0.72
RAB11FIP3-205ENST00000450428 PELP1Q8IZL8 1130 aaKnown RBP19.53■□□□□ 0.72
RAB11FIP3-205ENST00000450428 DCAF1Q9Y4B6 1507 aa19.49■□□□□ 0.71
RAB11FIP3-205ENST00000450428 CHIC1Q5VXU3 224 aa19.47■□□□□ 0.71
RAB11FIP3-205ENST00000450428 LOC105371045A0A1W2PR82 267 aa19.42■□□□□ 0.7
RAB11FIP3-205ENST00000450428 SCAF1Q9H7N4 1312 aaKnown RBP19.4■□□□□ 0.7
RAB11FIP3-205ENST00000450428 SCRIBQ14160 1630 aa19.24■□□□□ 0.67
RAB11FIP3-205ENST00000450428 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
RAB11FIP3-205ENST00000450428 TRIM26Q12899 539 aaPredicted RBP19.1■□□□□ 0.65
RAB11FIP3-205ENST00000450428 NACADO15069 1562 aa19.02■□□□□ 0.64
RAB11FIP3-205ENST00000450428 FAM9AQ8IZU1 332 aaPredicted RBP18.9■□□□□ 0.62
RAB11FIP3-205ENST00000450428 NEUROD1Q13562 356 aa18.88■□□□□ 0.61
RAB11FIP3-205ENST00000450428 RSF1Q96T23 1441 aaPredicted RBP18.87■□□□□ 0.61
RAB11FIP3-205ENST00000450428 GTF3C3Q9Y5Q9 886 aa18.87■□□□□ 0.61
RAB11FIP3-205ENST00000450428 ZEB1P37275 1124 aaPredicted RBP18.85■□□□□ 0.61
RAB11FIP3-205ENST00000450428 RB1CC1Q8TDY2 1594 aa18.83■□□□□ 0.61
RAB11FIP3-205ENST00000450428 ACIN1Q9UKV3 1341 aaKnown RBP18.79■□□□□ 0.6
RAB11FIP3-205ENST00000450428 CECR2Q9BXF3 1484 aa18.78■□□□□ 0.6
RAB11FIP3-205ENST00000450428 PABPN1Q86U42 306 aaKnown RBP eCLIP18.76■□□□□ 0.595e-7■■■■□ 21.5
RAB11FIP3-205ENST00000450428 YTHDC1Q96MU7 727 aaKnown RBP18.72■□□□□ 0.59
RAB11FIP3-205ENST00000450428 TTBK1Q5TCY1 1321 aaPredicted RBP18.69■□□□□ 0.58
RAB11FIP3-205ENST00000450428 MYT1Q01538 1121 aa18.69■□□□□ 0.58
RAB11FIP3-205ENST00000450428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
RAB11FIP3-205ENST00000450428 TRIM41Q8WV44 630 aa18.63■□□□□ 0.57
RAB11FIP3-205ENST00000450428 MROH2BQ7Z745 1585 aa18.62■□□□□ 0.57
RAB11FIP3-205ENST00000450428 CENPBP07199 599 aaPredicted RBP18.61■□□□□ 0.57
RAB11FIP3-205ENST00000450428 CCER1Q8TC90 406 aaPredicted RBP18.61■□□□□ 0.57
RAB11FIP3-205ENST00000450428 DIEXFQ68CQ4 756 aaKnown RBP18.53■□□□□ 0.56
RAB11FIP3-205ENST00000450428 WIZO95785 1651 aa18.45■□□□□ 0.54
RAB11FIP3-205ENST00000450428 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
RAB11FIP3-205ENST00000450428 UNC13AQ9UPW8 1703 aa18.28■□□□□ 0.52
RAB11FIP3-205ENST00000450428 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
RAB11FIP3-205ENST00000450428 BICRAQ9NZM4 1560 aa18.21■□□□□ 0.51
RAB11FIP3-205ENST00000450428 CCDC88BA6NC98 1476 aa18.16■□□□□ 0.5
RAB11FIP3-205ENST00000450428 TOP2AP11388 1531 aaKnown RBP18.14■□□□□ 0.49
RAB11FIP3-205ENST00000450428 MIER1Q8N108 512 aa18.08■□□□□ 0.48
RAB11FIP3-205ENST00000450428 SMARCA2P51531 1590 aa18.02■□□□□ 0.47
RAB11FIP3-205ENST00000450428 ZNF316A6NFI3 1004 aaPredicted RBP18■□□□□ 0.47
RAB11FIP3-205ENST00000450428 ABCC8Q09428 1581 aa18■□□□□ 0.47
RAB11FIP3-205ENST00000450428 BAZ1BQ9UIG0 1483 aaKnown RBP17.97■□□□□ 0.47
RAB11FIP3-205ENST00000450428 ATAD2BQ9ULI0 1458 aa17.97■□□□□ 0.47
RAB11FIP3-205ENST00000450428 BCL11AQ9H165 835 aa17.96■□□□□ 0.47
RAB11FIP3-205ENST00000450428 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
RAB11FIP3-205ENST00000450428 BCANQ96GW7 911 aa17.88■□□□□ 0.45
RAB11FIP3-205ENST00000450428 UBTFP17480 764 aaKnown RBP17.88■□□□□ 0.45
RAB11FIP3-205ENST00000450428 SOGA1O94964 1423 aa17.83■□□□□ 0.45
RAB11FIP3-205ENST00000450428 EIF4G1Q04637 1599 aaKnown RBP17.82■□□□□ 0.44
RAB11FIP3-205ENST00000450428 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
RAB11FIP3-205ENST00000450428 CSRNP3Q8WYN3 585 aa17.81■□□□□ 0.44
RAB11FIP3-205ENST00000450428 PEG3Q9GZU2 1588 aa17.8■□□□□ 0.44
RAB11FIP3-205ENST00000450428 ANP32EQ9BTT0 268 aa17.77■□□□□ 0.43
RAB11FIP3-205ENST00000450428 RANGAP1P46060 587 aaPredicted RBP17.76■□□□□ 0.43
RAB11FIP3-205ENST00000450428 SUPT16HQ9Y5B9 1047 aaKnown RBP17.74■□□□□ 0.43
RAB11FIP3-205ENST00000450428 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
RAB11FIP3-205ENST00000450428 TSHZ2Q9NRE2 1034 aa17.7■□□□□ 0.42
RAB11FIP3-205ENST00000450428 NCAPD3P42695 1498 aa17.66■□□□□ 0.42
RAB11FIP3-205ENST00000450428 EEA1Q15075 1411 aa17.6■□□□□ 0.41
RAB11FIP3-205ENST00000450428 CEP162Q5TB80 1403 aa17.58■□□□□ 0.4
RAB11FIP3-205ENST00000450428 SYNJ1O43426 1573 aa17.58■□□□□ 0.4
RAB11FIP3-205ENST00000450428 TNIKQ9UKE5 1360 aa17.54■□□□□ 0.4
RAB11FIP3-205ENST00000450428 HMGXB3Q12766 1538 aa17.53■□□□□ 0.4
RAB11FIP3-205ENST00000450428 ITGAEP38570 1179 aa17.51■□□□□ 0.39
RAB11FIP3-205ENST00000450428 GOLGA3Q08378 1498 aa17.51■□□□□ 0.39
RAB11FIP3-205ENST00000450428 FKBP8Q14318 412 aa17.48■□□□□ 0.39
RAB11FIP3-205ENST00000450428 KCNH8Q96L42 1107 aa17.47■□□□□ 0.39
RAB11FIP3-205ENST00000450428 APLP2Q06481 763 aa17.44■□□□□ 0.38
RAB11FIP3-205ENST00000450428 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
RAB11FIP3-205ENST00000450428 CFTRP13569 1480 aa17.42■□□□□ 0.38
RAB11FIP3-205ENST00000450428 CADPSQ9ULU8 1353 aa17.41■□□□□ 0.38
RAB11FIP3-205ENST00000450428 CC2D2AQ9P2K1 1620 aa17.4■□□□□ 0.38
RAB11FIP3-205ENST00000450428 RAPGEF2Q9Y4G8 1499 aa17.38■□□□□ 0.37
RAB11FIP3-205ENST00000450428 CLIP1P30622 1438 aa17.37■□□□□ 0.37
RAB11FIP3-205ENST00000450428 ERICH6Q7L0X2 663 aa17.36■□□□□ 0.37
RAB11FIP3-205ENST00000450428 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
RAB11FIP3-205ENST00000450428 CUX1P39880 1505 aa17.33■□□□□ 0.37
RAB11FIP3-205ENST00000450428 KIF27Q86VH2 1401 aa17.32■□□□□ 0.36
RAB11FIP3-205ENST00000450428 RBM19Q9Y4C8 960 aaKnown RBP17.32■□□□□ 0.36
RAB11FIP3-205ENST00000450428 NEFLP07196 543 aa17.3■□□□□ 0.36
RAB11FIP3-205ENST00000450428 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
RAB11FIP3-205ENST00000450428 TRIM52Q96A61 297 aa17.27■□□□□ 0.36
RAB11FIP3-205ENST00000450428 CUX2O14529 1486 aa17.24■□□□□ 0.35
RAB11FIP3-205ENST00000450428 KIF21BO75037 1637 aa17.24■□□□□ 0.35
RAB11FIP3-205ENST00000450428 IRX6P78412 446 aaPredicted RBP17.23■□□□□ 0.35
RAB11FIP3-205ENST00000450428 PRKCSHP14314 528 aaPredicted RBP17.23■□□□□ 0.35
RAB11FIP3-205ENST00000450428 FANCD2Q9BXW9 1451 aa17.22■□□□□ 0.35
RAB11FIP3-205ENST00000450428 NESP48681 1621 aa17.22■□□□□ 0.35
RAB11FIP3-205ENST00000450428 BIVM-ERCC5R4GMW8 1640 aa17.21■□□□□ 0.35
RAB11FIP3-205ENST00000450428 HIRIP3Q9BW71 556 aaPredicted RBP17.21■□□□□ 0.34
RAB11FIP3-205ENST00000450428 CLSPNQ9HAW4 1339 aa17.2■□□□□ 0.34
RAB11FIP3-205ENST00000450428 DDX10Q13206 875 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms