RNA–Protein interactions for RNA: ENST00000539399.1

TM7SF3-207, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 4

Gene TM7SF3, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-207ENST00000539399 NISCHQ9Y2I1 1504 aa62.49■■■■■ 7.59
TM7SF3-207ENST00000539399 CCDC180Q9P1Z9 1646 aa56.05■■■■■ 6.56
TM7SF3-207ENST00000539399 ABCC9O60706 1549 aa55.78■■■■■ 6.52
TM7SF3-207ENST00000539399 RB1CC1Q8TDY2 1594 aa53.19■■■■■ 6.11
TM7SF3-207ENST00000539399 NACADO15069 1562 aa52.87■■■■■ 6.05
TM7SF3-207ENST00000539399 DCAF8L2P0C7V8 631 aa52.57■■■■■ 6.01
TM7SF3-207ENST00000539399 MYO15BQ96JP2 1530 aa52.19■■■■■ 5.94
TM7SF3-207ENST00000539399 UNC13AQ9UPW8 1703 aa52.15■■■■■ 5.94
TM7SF3-207ENST00000539399 DNAJC5BQ9UF47 199 aa52.11■■■■■ 5.93
TM7SF3-207ENST00000539399 PABPN1Q86U42 306 aaKnown RBP eCLIP51.93■■■■■ 5.9
TM7SF3-207ENST00000539399 ZCCHC6Q5VYS8 1495 aaKnown RBP51.84■■■■■ 5.89
TM7SF3-207ENST00000539399 BICRAQ9NZM4 1560 aa51.69■■■■■ 5.86
TM7SF3-207ENST00000539399 DCAF1Q9Y4B6 1507 aa51.61■■■■■ 5.85
TM7SF3-207ENST00000539399 SCRIBQ14160 1630 aa51.09■■■■■ 5.77
TM7SF3-207ENST00000539399 SHROOM4Q9ULL8 1493 aa50.93■■■■■ 5.74
TM7SF3-207ENST00000539399 CC2D2AQ9P2K1 1620 aa50.44■■■■■ 5.66
TM7SF3-207ENST00000539399 EIF4G1Q04637 1599 aaKnown RBP50.37■■■■■ 5.65
TM7SF3-207ENST00000539399 CECR2Q9BXF3 1484 aa50.2■■■■■ 5.63
TM7SF3-207ENST00000539399 NCAPD3P42695 1498 aa48.77■■■■■ 5.4
TM7SF3-207ENST00000539399 SMARCA4P51532 1647 aa48.75■■■■■ 5.39
TM7SF3-207ENST00000539399 ATAD2BQ9ULI0 1458 aa48.67■■■■■ 5.38
TM7SF3-207ENST00000539399 SMARCA2P51531 1590 aa48.56■■■■■ 5.36
TM7SF3-207ENST00000539399 BAZ1AQ9NRL2 1556 aaPredicted RBP48.49■■■■■ 5.35
TM7SF3-207ENST00000539399 HMGXB3Q12766 1538 aa48.48■■■■■ 5.35
TM7SF3-207ENST00000539399 PEG3Q9GZU2 1588 aa48.24■■■■■ 5.31
TM7SF3-207ENST00000539399 BAZ1BQ9UIG0 1483 aaKnown RBP48.23■■■■■ 5.31
TM7SF3-207ENST00000539399 MROH2BQ7Z745 1585 aa48.17■■■■■ 5.3
TM7SF3-207ENST00000539399 ERCC6Q03468 1493 aa48.12■■■■■ 5.29
TM7SF3-207ENST00000539399 NESP48681 1621 aa48.01■■■■■ 5.28
TM7SF3-207ENST00000539399 CUX2O14529 1486 aa47.97■■■■■ 5.27
TM7SF3-207ENST00000539399 LAMC3Q9Y6N6 1575 aa47.69■■■■■ 5.22
TM7SF3-207ENST00000539399 WIZO95785 1651 aa47.65■■■■■ 5.22
TM7SF3-207ENST00000539399 DNAJC5Q9H3Z4 198 aa47.65■■■■■ 5.22
TM7SF3-207ENST00000539399 THOC2Q8NI27 1593 aaKnown RBP47.51■■■■■ 5.2
TM7SF3-207ENST00000539399 KIF21AQ7Z4S6 1674 aa47.48■■■■■ 5.19
TM7SF3-207ENST00000539399 PDS5BQ9NTI5 1447 aa47.34■■■■■ 5.17
TM7SF3-207ENST00000539399 CADPSQ9ULU8 1353 aa47.29■■■■■ 5.16
TM7SF3-207ENST00000539399 RSF1Q96T23 1441 aaPredicted RBP47.22■■■■■ 5.15
TM7SF3-207ENST00000539399 TOP2AP11388 1531 aaKnown RBP47.02■■■■■ 5.12
TM7SF3-207ENST00000539399 MRC2Q9UBG0 1479 aa46.97■■■■■ 5.11
TM7SF3-207ENST00000539399 WDR62O43379 1518 aa46.87■■■■■ 5.09
TM7SF3-207ENST00000539399 CFTRP13569 1480 aa46.82■■■■■ 5.09
TM7SF3-207ENST00000539399 CEP164Q9UPV0 1460 aa46.82■■■■■ 5.09
TM7SF3-207ENST00000539399 FANCD2Q9BXW9 1451 aa46.8■■■■■ 5.08
TM7SF3-207ENST00000539399 PRDM2Q13029 1718 aa46.53■■■■■ 5.04
TM7SF3-207ENST00000539399 CCDC88BA6NC98 1476 aa46.46■■■■■ 5.03
TM7SF3-207ENST00000539399 URB2Q14146 1524 aaKnown RBP46.43■■■■■ 5.02
TM7SF3-207ENST00000539399 TOPBP1Q92547 1522 aa45.95■■■■■ 4.95
TM7SF3-207ENST00000539399 IFT140Q96RY7 1462 aa45.87■■■■■ 4.93
TM7SF3-207ENST00000539399 ZNF608Q9ULD9 1512 aaPredicted RBP45.82■■■■■ 4.92
TM7SF3-207ENST00000539399 DNMBPQ6XZF7 1577 aa45.81■■■■■ 4.92
TM7SF3-207ENST00000539399 ABCC8Q09428 1581 aa45.8■■■■■ 4.92
TM7SF3-207ENST00000539399 OSCARQ8IYS5 282 aa45.75■■■■■ 4.91
TM7SF3-207ENST00000539399 TRIM41Q8WV44 630 aa45.67■■■■■ 4.9
TM7SF3-207ENST00000539399 EIF4G3O43432 1585 aaKnown RBP45.61■■■■■ 4.89
TM7SF3-207ENST00000539399 TARBP1Q13395 1621 aaKnown RBP45.57■■■■■ 4.89
TM7SF3-207ENST00000539399 POLA1P09884 1462 aaPredicted RBP45.49■■■■■ 4.87
TM7SF3-207ENST00000539399 AQRO60306 1485 aaKnown RBP eCLIP45.4■■■■■ 4.86
TM7SF3-207ENST00000539399 RAD54L2Q9Y4B4 1467 aa45.32■■■■■ 4.85
TM7SF3-207ENST00000539399 CHD1O14646 1710 aa45.29■■■■■ 4.84
TM7SF3-207ENST00000539399 RIMBP3CA6NJZ7 1639 aa45.26■■■■■ 4.84
TM7SF3-207ENST00000539399 RIMBP3BA6NNM3 1639 aa45.26■■■■■ 4.84
TM7SF3-207ENST00000539399 RIMBP3Q9UFD9 1639 aa45.26■■■■■ 4.84
TM7SF3-207ENST00000539399 CUX1P39880 1505 aa45.26■■■■■ 4.84
TM7SF3-207ENST00000539399 SUPT5HO00267 1087 aaKnown RBP45.25■■■■■ 4.83
TM7SF3-207ENST00000539399 SOGA1O94964 1423 aa45.25■■■■■ 4.83
TM7SF3-207ENST00000539399 FGD5Q6ZNL6 1462 aa45.24■■■■■ 4.83
TM7SF3-207ENST00000539399 TDRD9Q8NDG6 1382 aaKnown RBP45.14■■■■■ 4.82
TM7SF3-207ENST00000539399 ARHGEF11O15085 1522 aa45.11■■■■■ 4.81
TM7SF3-207ENST00000539399 WDR97A6NE52 1622 aa45.08■■■■■ 4.81
TM7SF3-207ENST00000539399 FBLN2P98095 1184 aa45.01■■■■■ 4.8
TM7SF3-207ENST00000539399 SNAPC4Q5SXM2 1469 aa44.96■■■■■ 4.79
TM7SF3-207ENST00000539399 GRIN2BQ13224 1484 aa44.85■■■■■ 4.77
TM7SF3-207ENST00000539399 MAGI1Q96QZ7 1491 aaPredicted RBP44.83■■■■■ 4.77
TM7SF3-207ENST00000539399 PBRM1Q86U86 1689 aa44.8■■■■■ 4.76
TM7SF3-207ENST00000539399 GAPVD1Q14C86 1478 aa44.72■■■■■ 4.75
TM7SF3-207ENST00000539399 ABCA10Q8WWZ4 1543 aa44.72■■■■■ 4.75
TM7SF3-207ENST00000539399 CHMP7Q8WUX9 453 aaPredicted RBP44.7■■■■■ 4.75
TM7SF3-207ENST00000539399 ABCA5Q8WWZ7 1642 aa44.7■■■■■ 4.75
TM7SF3-207ENST00000539399 CLASP1Q7Z460 1538 aa44.7■■■■■ 4.75
TM7SF3-207ENST00000539399 CYB5RLQ6IPT4 315 aa44.69■■■■■ 4.74
TM7SF3-207ENST00000539399 SYNJ2O15056 1496 aa44.68■■■■■ 4.74
TM7SF3-207ENST00000539399 ARAP1Q96P48 1450 aa44.68■■■■■ 4.74
TM7SF3-207ENST00000539399 SYNJ1O43426 1573 aa44.67■■■■■ 4.74
TM7SF3-207ENST00000539399 BIVM-ERCC5R4GMW8 1640 aa44.62■■■■■ 4.73
TM7SF3-207ENST00000539399 TOP2BQ02880 1626 aa44.6■■■■■ 4.73
TM7SF3-207ENST00000539399 WRNQ14191 1432 aaPredicted RBP eCLIP44.56■■■■■ 4.72
TM7SF3-207ENST00000539399 ADAMTS12P58397 1594 aa44.34■■■■■ 4.69
TM7SF3-207ENST00000539399 GRIN2AQ12879 1464 aa44.29■■■■■ 4.68
TM7SF3-207ENST00000539399 ERICH3Q5RHP9 1530 aa44.17■■■■■ 4.66
TM7SF3-207ENST00000539399 CEP170Q5SW79 1584 aa44.17■■■■■ 4.66
TM7SF3-207ENST00000539399 FHAD1B1AJZ9 1412 aa44.15■■■■■ 4.66
TM7SF3-207ENST00000539399 TRHP20396 242 aaPredicted RBP44.12■■■■■ 4.65
TM7SF3-207ENST00000539399 NUP160Q12769 1436 aa44.12■■■■■ 4.65
TM7SF3-207ENST00000539399 ERCC6L2Q5T890 1561 aa44.05■■■■■ 4.64
TM7SF3-207ENST00000539399 SHROOM2Q13796 1616 aa43.97■■■■■ 4.63
TM7SF3-207ENST00000539399 RUSC2Q8N2Y8 1516 aa43.72■■■■■ 4.59
TM7SF3-207ENST00000539399 PRG4Q92954 1404 aaPredicted RBP43.67■■■■■ 4.58
TM7SF3-207ENST00000539399 KIF27Q86VH2 1401 aa43.65■■■■■ 4.58
TM7SF3-207ENST00000539399 CUL7Q14999 1698 aa43.62■■■■■ 4.57
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms