RNA–Protein interactions for RNA: YOL123W

HRP1, Transcript of Subunit of cleavage factor I, yeastyeast

Gene HRP1, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRP1YOL123W FAP1P53971 965 aa12.18□□□□□ -0.46
HRP1YOL123W PRY3P47033 881 aa11.57□□□□□ -0.56
HRP1YOL123W DRS1P32892 752 aaKnown RBP11.56□□□□□ -0.56
HRP1YOL123W MTC1P47018 478 aaKnown RBP11.44□□□□□ -0.58
HRP1YOL123W YCK3P39962 524 aa10.87□□□□□ -0.67
HRP1YOL123W HAA1Q12753 694 aaKnown RBP10.72□□□□□ -0.69
HRP1YOL123W AAD16Q02895 342 aa10.41□□□□□ -0.74
HRP1YOL123W BFR2Q06631 534 aaKnown RBP10.19□□□□□ -0.78
HRP1YOL123W PRI1P10363 409 aa10.15□□□□□ -0.79
HRP1YOL123W TFA1P36100 482 aa10.02□□□□□ -0.81
HRP1YOL123W DIP2Q12220 943 aaPredicted RBP9.82□□□□□ -0.84
HRP1YOL123W BUD31P25337 157 aaPredicted RBP9.81□□□□□ -0.84
HRP1YOL123W AVT3P36062 692 aa9.69□□□□□ -0.86
HRP1YOL123W SGS1P35187 1447 aa9.51□□□□□ -0.89
HRP1YOL123W TSR3Q12094 313 aaKnown RBP9.45□□□□□ -0.9
HRP1YOL123W YGL015CP33199 130 aa9.44□□□□□ -0.9
HRP1YOL123W INO80P53115 1489 aa9.35□□□□□ -0.91
HRP1YOL123W ISW2Q08773 1120 aa9.32□□□□□ -0.92
HRP1YOL123W RSE1Q04693 1361 aaKnown RBP9.26□□□□□ -0.93
HRP1YOL123W RQC2Q12532 1038 aaKnown RBP9.22□□□□□ -0.93
HRP1YOL123W TCB3Q03640 1545 aaKnown RBP9.21□□□□□ -0.94
HRP1YOL123W RPG1P38249 964 aaKnown RBP9.16□□□□□ -0.94
HRP1YOL123W SPA2P23201 1466 aaKnown RBP9.16□□□□□ -0.94
HRP1YOL123W TY1B-DR4Q07793 1604 aa9.12□□□□□ -0.95
HRP1YOL123W SSN2P38931 1420 aa9.11□□□□□ -0.95
HRP1YOL123W SIS1P25294 352 aaKnown RBP9.09□□□□□ -0.95
HRP1YOL123W MRPL32P25348 183 aa9.09□□□□□ -0.95
HRP1YOL123W MON2P48563 1636 aaPredicted RBP9.03□□□□□ -0.96
HRP1YOL123W HSL1P34244 1518 aa8.93□□□□□ -0.98
HRP1YOL123W RPL17AP05740 184 aaKnown RBP8.9□□□□□ -0.99
HRP1YOL123W RPL17BP46990 184 aaKnown RBP8.9□□□□□ -0.99
HRP1YOL123W SPT6P23615 1451 aaKnown RBP8.89□□□□□ -0.99
HRP1YOL123W SWR1Q05471 1514 aa8.87□□□□□ -0.99
HRP1YOL123W REB1P21538 810 aa8.8□□□□□ -1
HRP1YOL123W HIR3P47171 1648 aa8.77□□□□□ -1.01
HRP1YOL123W XRN1P22147 1528 aaKnown RBP8.7□□□□□ -1.02
HRP1YOL123W REV3P14284 1504 aa8.61□□□□□ -1.03
HRP1YOL123W KOG1P38873 1557 aa8.57□□□□□ -1.04
HRP1YOL123W THO2P53552 1597 aaKnown RBP8.57□□□□□ -1.04
HRP1YOL123W SIN3P22579 1536 aa8.57□□□□□ -1.04
HRP1YOL123W DNA2P38859 1522 aa8.57□□□□□ -1.04
HRP1YOL123W SPT21P35209 758 aa8.56□□□□□ -1.04
HRP1YOL123W SSK2P53599 1579 aa8.52□□□□□ -1.05
HRP1YOL123W UBP9P39967 754 aa8.51□□□□□ -1.05
HRP1YOL123W DMA1P38823 416 aa8.51□□□□□ -1.05
HRP1YOL123W RIM101P33400 625 aa8.46□□□□□ -1.06
HRP1YOL123W ESP1Q03018 1630 aa8.45□□□□□ -1.06
HRP1YOL123W TAF2P23255 1407 aa8.45□□□□□ -1.06
HRP1YOL123W BUD4P47136 1447 aa8.45□□□□□ -1.06
HRP1YOL123W MYO2P19524 1574 aaKnown RBP8.42□□□□□ -1.06
HRP1YOL123W ATG2P53855 1592 aa8.4□□□□□ -1.06
HRP1YOL123W ECM5Q03214 1411 aa8.38□□□□□ -1.07
HRP1YOL123W TAF7Q05021 590 aa8.34□□□□□ -1.07
HRP1YOL123W PTP3P40048 928 aa8.33□□□□□ -1.08
HRP1YOL123W SKI3P17883 1432 aaKnown RBP8.31□□□□□ -1.08
HRP1YOL123W PEP1P32319 1579 aa8.31□□□□□ -1.08
HRP1YOL123W MDS3P53094 1487 aa8.29□□□□□ -1.08
HRP1YOL123W YPK9Q12697 1472 aa8.29□□□□□ -1.08
HRP1YOL123W UBP10P53874 792 aaPredicted RBP8.28□□□□□ -1.08
HRP1YOL123W YKR023WP36119 530 aaKnown RBP8.27□□□□□ -1.09
HRP1YOL123W POL1P13382 1468 aa8.27□□□□□ -1.09
HRP1YOL123W CHD1P32657 1468 aa8.24□□□□□ -1.09
HRP1YOL123W STU1P38198 1513 aa8.23□□□□□ -1.09
HRP1YOL123W SCC2Q04002 1493 aa8.22□□□□□ -1.09
HRP1YOL123W MAP2P38174 421 aaKnown RBP8.21□□□□□ -1.09
HRP1YOL123W MMS22Q06164 1454 aa8.2□□□□□ -1.1
HRP1YOL123W RKR1Q04781 1562 aa8.19□□□□□ -1.1
HRP1YOL123W OXP1P28273 1286 aa8.19□□□□□ -1.1
HRP1YOL123W CDC27P38042 758 aa8.18□□□□□ -1.1
HRP1YOL123W RPO31P04051 1460 aa8.17□□□□□ -1.1
HRP1YOL123W YTA7P40340 1379 aa8.16□□□□□ -1.1
HRP1YOL123W YOR1P53049 1477 aa8.15□□□□□ -1.1
HRP1YOL123W BPT1P14772 1559 aa8.14□□□□□ -1.11
HRP1YOL123W SSP1P38871 571 aa8.14□□□□□ -1.11
HRP1YOL123W UFD4P33202 1483 aa8.13□□□□□ -1.11
HRP1YOL123W TY2B-LR1P0C2J3 1770 aa8.12□□□□□ -1.11
HRP1YOL123W TY2B-FP0CX63 1770 aa8.12□□□□□ -1.11
HRP1YOL123W TY2B-GR2P0CX64 1770 aa8.12□□□□□ -1.11
HRP1YOL123W TY2B-CP25384 1770 aa8.12□□□□□ -1.11
HRP1YOL123W TY2B-DR2Q03494 1770 aa8.12□□□□□ -1.11
HRP1YOL123W TY1B-DR1Q03855 1755 aa8.12□□□□□ -1.11
HRP1YOL123W TY2B-DR3Q07791 1770 aaKnown RBP8.12□□□□□ -1.11
HRP1YOL123W TY2B-OR1Q12113 1770 aa8.12□□□□□ -1.11
HRP1YOL123W TY2B-DR1Q12472 1770 aa8.12□□□□□ -1.11
HRP1YOL123W TY2B-OR2Q12501 1770 aa8.12□□□□□ -1.11
HRP1YOL123W YIL055CP40523 627 aaKnown RBP8.12□□□□□ -1.11
HRP1YOL123W TOP2P06786 1428 aaKnown RBP8.12□□□□□ -1.11
HRP1YOL123W YCF1P39109 1515 aaKnown RBP8.11□□□□□ -1.11
HRP1YOL123W TFC8Q12308 588 aa8.11□□□□□ -1.11
HRP1YOL123W HOP09932 586 aa8.1□□□□□ -1.11
HRP1YOL123W MYO4P32492 1471 aa8.09□□□□□ -1.11
HRP1YOL123W LEO1P38439 464 aa8.09□□□□□ -1.11
HRP1YOL123W YAH1Q12184 172 aaKnown RBP8.09□□□□□ -1.11
HRP1YOL123W SMC4Q12267 1418 aa8.09□□□□□ -1.11
HRP1YOL123W TY1B-DR3Q99231 1755 aa8.08□□□□□ -1.12
HRP1YOL123W TY2B-BQ12491 1770 aa8.05□□□□□ -1.12
HRP1YOL123W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
HRP1YOL123W DCD1P06773 312 aa8.02□□□□□ -1.13
HRP1YOL123W SAS10Q12136 610 aaPredicted RBP8□□□□□ -1.13
HRP1YOL123W TY1B-HO13535 1793 aa8□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms