RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W YLR225CQ05948 407 aaKnown RBP7.81□□□□□ -1.16
LSC1YOR142W SGD1Q06132 899 aa7.81□□□□□ -1.16
LSC1YOR142W CFT2Q12102 859 aaPredicted RBP7.81□□□□□ -1.16
LSC1YOR142W PGA3Q12746 312 aaKnown RBP7.81□□□□□ -1.16
LSC1YOR142W ERG12P07277 443 aa7.8□□□□□ -1.16
LSC1YOR142W RIT1P23796 513 aa7.8□□□□□ -1.16
LSC1YOR142W ANP1P32629 500 aa7.8□□□□□ -1.16
LSC1YOR142W MCD4P36051 919 aa7.8□□□□□ -1.16
LSC1YOR142W VPS8P39702 1274 aa7.8□□□□□ -1.16
LSC1YOR142W VAB2P40003 282 aa7.8□□□□□ -1.16
LSC1YOR142W UBX5Q06682 500 aa7.8□□□□□ -1.16
LSC1YOR142W SUB2Q07478 446 aaKnown RBP7.8□□□□□ -1.16
LSC1YOR142W SSF2Q12153 453 aaPredicted RBP7.8□□□□□ -1.16
LSC1YOR142W CDC60P26637 1090 aaKnown RBP7.79□□□□□ -1.16
LSC1YOR142W CIC1P38779 376 aaKnown RBP7.79□□□□□ -1.16
LSC1YOR142W CRG1P38892 291 aaRIP-Chip data7.79□□□□□ -1.16not detected
LSC1YOR142W SPN1Q06505 410 aaPredicted RBP7.79□□□□□ -1.16
LSC1YOR142W IMP2'P32351 346 aa7.78□□□□□ -1.16
LSC1YOR142W RER2P35196 286 aa7.78□□□□□ -1.16
LSC1YOR142W DLD1P32891 587 aa7.77□□□□□ -1.17
LSC1YOR142W UBP9P39967 754 aa7.77□□□□□ -1.17
LSC1YOR142W CSM2P40465 213 aa7.77□□□□□ -1.17
LSC1YOR142W VPS30Q02948 557 aa7.77□□□□□ -1.17
LSC1YOR142W SRS2P12954 1174 aa7.76□□□□□ -1.17
LSC1YOR142W SDH2P21801 266 aa7.76□□□□□ -1.17
LSC1YOR142W PER1P25625 357 aa7.76□□□□□ -1.17
LSC1YOR142W PEP3P27801 918 aa7.76□□□□□ -1.17
LSC1YOR142W SLX5P32828 619 aaKnown RBP7.76□□□□□ -1.17
LSC1YOR142W PAM1P37304 830 aaKnown RBP7.76□□□□□ -1.17
LSC1YOR142W FOL1P53848 824 aa7.76□□□□□ -1.17
LSC1YOR142W TFC6Q06339 672 aa7.76□□□□□ -1.17
LSC1YOR142W NUC1P08466 329 aa7.75□□□□□ -1.17
LSC1YOR142W RAD18P10862 487 aa7.75□□□□□ -1.17
LSC1YOR142W SRP54P20424 541 aaKnown RBP7.75□□□□□ -1.17
LSC1YOR142W MAK31P23059 88 aa7.75□□□□□ -1.17
LSC1YOR142W PHO88P38264 188 aaPredicted RBP7.75□□□□□ -1.17
LSC1YOR142W ATG1P53104 897 aa7.75□□□□□ -1.17
LSC1YOR142W SOL4P53315 255 aa7.75□□□□□ -1.17
LSC1YOR142W RPT6Q01939 405 aaKnown RBP7.75□□□□□ -1.17
LSC1YOR142W MYO5Q04439 1219 aaKnown RBP7.75□□□□□ -1.17
LSC1YOR142W SUE1Q06524 206 aa7.75□□□□□ -1.17
LSC1YOR142W PIB1Q06651 286 aa7.75□□□□□ -1.17
LSC1YOR142W SAM1P10659 382 aaKnown RBP7.74□□□□□ -1.17
LSC1YOR142W VMA2P16140 517 aaKnown RBP7.74□□□□□ -1.17
LSC1YOR142W DIT2P21595 489 aa7.74□□□□□ -1.17
LSC1YOR142W RPL8BP29453 256 aaKnown RBP7.74□□□□□ -1.17
LSC1YOR142W EUG1P32474 517 aa7.74□□□□□ -1.17
LSC1YOR142W AIM9P40053 627 aaKnown RBP7.74□□□□□ -1.17
LSC1YOR142W TMA64Q04600 565 aaKnown RBP7.74□□□□□ -1.17
LSC1YOR142W TY3A-GQ12173 290 aa7.74□□□□□ -1.17
LSC1YOR142W TY3A-IQ99219 290 aa7.74□□□□□ -1.17
LSC1YOR142W PKC1P24583 1151 aa7.73□□□□□ -1.17
LSC1YOR142W UTR4P32626 227 aa7.73□□□□□ -1.17
LSC1YOR142W NDT80P38830 627 aa7.73□□□□□ -1.17
LSC1YOR142W SSP1P38871 571 aa7.73□□□□□ -1.17
LSC1YOR142W ECM23Q02710 187 aa7.73□□□□□ -1.17
LSC1YOR142W DUS4Q06063 367 aa7.73□□□□□ -1.17
LSC1YOR142W EST2Q06163 884 aa7.73□□□□□ -1.17
LSC1YOR142W FKS1P38631 1876 aaKnown RBP7.72□□□□□ -1.17
LSC1YOR142W TRL1P09880 827 aaKnown RBP7.72□□□□□ -1.17
LSC1YOR142W TGL1P34163 548 aa7.72□□□□□ -1.17
LSC1YOR142W SHP1P34223 423 aa7.72□□□□□ -1.17
LSC1YOR142W VPS45P38932 577 aa7.72□□□□□ -1.17
LSC1YOR142W PSF2P40359 213 aa7.72□□□□□ -1.17
LSC1YOR142W ALD6P54115 500 aaKnown RBP7.72□□□□□ -1.17
LSC1YOR142W ESF1Q06344 628 aaKnown RBP7.72□□□□□ -1.17
LSC1YOR142W UTP4Q06679 776 aaKnown RBP7.72□□□□□ -1.17
LSC1YOR142W TPM1P17536 199 aaKnown RBP7.71□□□□□ -1.18
LSC1YOR142W PES4P39684 611 aa7.71□□□□□ -1.18
LSC1YOR142W GPB2P39717 880 aa7.71□□□□□ -1.18
LSC1YOR142W VID28P40547 921 aa7.71□□□□□ -1.18
LSC1YOR142W ULP1Q02724 621 aa7.71□□□□□ -1.18
LSC1YOR142W YOR111WQ99210 232 aa7.71□□□□□ -1.18
LSC1YOR142W MOT1P32333 1867 aa7.7□□□□□ -1.18
LSC1YOR142W PHR1P05066 565 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
LSC1YOR142W MDM1Q01846 1127 aa7.7□□□□□ -1.18
LSC1YOR142W DUS3Q06053 668 aaKnown RBP7.7□□□□□ -1.18
LSC1YOR142W DSE3Q08729 430 aa7.7□□□□□ -1.18
LSC1YOR142W PRE10P21242 288 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
LSC1YOR142W PAH1P32567 862 aa7.69□□□□□ -1.18
LSC1YOR142W AKR1P39010 764 aa7.69□□□□□ -1.18
LSC1YOR142W CTR1P49573 406 aa7.69□□□□□ -1.18
LSC1YOR142W BRE5P53741 515 aaKnown RBP7.69□□□□□ -1.18
LSC1YOR142W BUL2Q03758 920 aaKnown RBP7.69□□□□□ -1.18
LSC1YOR142W SPH1Q06160 661 aa7.69□□□□□ -1.18
LSC1YOR142W CSC1Q06538 782 aa7.69□□□□□ -1.18
LSC1YOR142W CLF1Q12309 687 aaPredicted RBP7.69□□□□□ -1.18
LSC1YOR142W RPC31P17890 251 aa7.68□□□□□ -1.18
LSC1YOR142W RNR3P21672 869 aaKnown RBP7.68□□□□□ -1.18
LSC1YOR142W SRP40P32583 406 aaPredicted RBP7.68□□□□□ -1.18
LSC1YOR142W FBP26P32604 452 aa7.68□□□□□ -1.18
LSC1YOR142W YKR018CP36114 725 aa7.68□□□□□ -1.18
LSC1YOR142W SPO22P40511 975 aa7.68□□□□□ -1.18
LSC1YOR142W KRI1P42846 591 aaKnown RBP7.68□□□□□ -1.18
LSC1YOR142W ALG2P43636 503 aa7.68□□□□□ -1.18
LSC1YOR142W YGR125WP53273 1036 aa7.68□□□□□ -1.18
LSC1YOR142W ICL2Q12031 575 aa7.68□□□□□ -1.18
LSC1YOR142W MCR1P36060 302 aaKnown RBP7.67□□□□□ -1.18
LSC1YOR142W VPS29P38759 282 aa7.67□□□□□ -1.18
LSC1YOR142W AFG3P39925 761 aa7.67□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 75.6 ms