RNA–Protein interactions for RNA: YNL112W

DBP2, Transcript of ATP-dependent RNA helicase of the DEAD-box protein family, yeast

Gene DBP2, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP2	YNL112W	VPS1	P21576	704 aa	Known RBP	18.29	■□□□□ 0.52
DBP2	YNL112W	SRM1	P21827	482 aa		18.29	■□□□□ 0.52
DBP2	YNL112W	CHS3	P29465	1165 aa		18.29	■□□□□ 0.52
DBP2	YNL112W	BMH2	P34730	273 aa	Known RBP	18.29	■□□□□ 0.52
DBP2	YNL112W	TIM50	Q02776	476 aa		18.29	■□□□□ 0.52
DBP2	YNL112W	CDC6	P09119	513 aa		18.28	■□□□□ 0.52
DBP2	YNL112W	RNR3	P21672	869 aa	Known RBP	18.28	■□□□□ 0.52
DBP2	YNL112W	YBL028C	P38202	106 aa		18.28	■□□□□ 0.52
DBP2	YNL112W	THS1	P04801	734 aa	Known RBP	18.27	■□□□□ 0.52
DBP2	YNL112W	CBP1	P07252	654 aa		18.27	■□□□□ 0.52
DBP2	YNL112W	CBP3	P21560	335 aa		18.27	■□□□□ 0.52
DBP2	YNL112W	KNS1	P32350	737 aa	Predicted RBP	18.27	■□□□□ 0.52
DBP2	YNL112W	DID4	P36108	232 aa		18.27	■□□□□ 0.52
DBP2	YNL112W	AIM7	Q12156	149 aa		18.27	■□□□□ 0.52
DBP2	YNL112W	ALG2	P43636	503 aa		18.27	■□□□□ 0.51
DBP2	YNL112W	PMA1	P05030	918 aa	Known RBP	18.26	■□□□□ 0.51
DBP2	YNL112W	KEL1	P38853	1164 aa	Known RBP	18.26	■□□□□ 0.51
DBP2	YNL112W	PCI8	P40512	444 aa		18.26	■□□□□ 0.51
DBP2	YNL112W	PIL1	P53252	339 aa	Known RBP	18.26	■□□□□ 0.51
DBP2	YNL112W	MYO1	P08964	1928 aa		18.26	■□□□□ 0.51
DBP2	YNL112W	YLR278C	Q05854	1341 aa		18.26	■□□□□ 0.51
DBP2	YNL112W	RPL8B	P29453	256 aa	Known RBP	18.25	■□□□□ 0.51
DBP2	YNL112W	CCT5	P40413	562 aa	Known RBP	18.25	■□□□□ 0.51
DBP2	YNL112W	SKG3	Q06315	1026 aa		18.25	■□□□□ 0.51
DBP2	YNL112W	DCS2	Q12123	353 aa		18.25	■□□□□ 0.51
DBP2	YNL112W	MET6	P05694	767 aa	Known RBP	18.24	■□□□□ 0.51
DBP2	YNL112W	KIN1	P13185	1064 aa		18.24	■□□□□ 0.51
DBP2	YNL112W	RXT2	P38255	430 aa		18.24	■□□□□ 0.51
DBP2	YNL112W	SRP54	P20424	541 aa	Known RBP	18.23	■□□□□ 0.51
DBP2	YNL112W	RAD53	P22216	821 aa		18.23	■□□□□ 0.51
DBP2	YNL112W	RPN12	P32496	274 aa		18.23	■□□□□ 0.51
DBP2	YNL112W	ELM1	P32801	640 aa		18.23	■□□□□ 0.51
DBP2	YNL112W	KRE33	P53914	1056 aa	Known RBP	18.23	■□□□□ 0.51
DBP2	YNL112W	VPS30	Q02948	557 aa		18.23	■□□□□ 0.51
DBP2	YNL112W	AIM44	Q99299	758 aa		18.23	■□□□□ 0.51
DBP2	YNL112W	TUB2	P02557	457 aa	Known RBP	18.23	■□□□□ 0.51
DBP2	YNL112W	RSM25	P40496	264 aa		18.23	■□□□□ 0.51
DBP2	YNL112W	FOL1	P53848	824 aa		18.22	■□□□□ 0.51
DBP2	YNL112W	AAD16	Q02895	342 aa		18.22	■□□□□ 0.51
DBP2	YNL112W	PGI1	P12709	554 aa	Known RBP	18.21	■□□□□ 0.51
DBP2	YNL112W	SPB4	P25808	606 aa	Predicted RBP	18.21	■□□□□ 0.51
DBP2	YNL112W	EMP47	P43555	445 aa		18.21	■□□□□ 0.51
DBP2	YNL112W	YDR341C	Q05506	607 aa	Known RBP	18.21	■□□□□ 0.51
DBP2	YNL112W	STI1	P15705	589 aa	Known RBP RIP-Chip data	18.2	■□□□□ 0.5	not detected
DBP2	YNL112W	SAM2	P19358	384 aa	Known RBP	18.2	■□□□□ 0.5
DBP2	YNL112W	RTG2	P32608	588 aa	Known RBP	18.2	■□□□□ 0.5
DBP2	YNL112W	SPT21	P35209	758 aa		18.2	■□□□□ 0.5
DBP2	YNL112W	CST26	P38226	397 aa		18.2	■□□□□ 0.5
DBP2	YNL112W	GDE1	Q02979	1223 aa		18.2	■□□□□ 0.5
DBP2	YNL112W	LAP2	Q10740	671 aa		18.2	■□□□□ 0.5
DBP2	YNL112W	GET3	Q12154	354 aa	Known RBP	18.2	■□□□□ 0.5
DBP2	YNL112W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	18.2	■□□□□ 0.5	not detected
DBP2	YNL112W	NUC1	P08466	329 aa		18.19	■□□□□ 0.5
DBP2	YNL112W	NIT1	P40447	199 aa		18.19	■□□□□ 0.5
DBP2	YNL112W	GIS4	Q04233	774 aa		18.19	■□□□□ 0.5
DBP2	YNL112W	RGP1	P16664	663 aa		18.18	■□□□□ 0.5
DBP2	YNL112W	CIT1	P00890	479 aa		18.17	■□□□□ 0.5
DBP2	YNL112W	MDM1	Q01846	1127 aa		18.17	■□□□□ 0.5
DBP2	YNL112W	DSE3	Q08729	430 aa		18.17	■□□□□ 0.5
DBP2	YNL112W	DDP1	Q99321	188 aa	Known RBP	18.17	■□□□□ 0.5
DBP2	YNL112W	TRS33	Q99394	268 aa		18.17	■□□□□ 0.5
DBP2	YNL112W	RSC1	P53236	928 aa		18.16	■□□□□ 0.5
DBP2	YNL112W	TUS1	Q06412	1307 aa		18.16	■□□□□ 0.5
DBP2	YNL112W	HXK1	P04806	485 aa	Known RBP	18.16	■□□□□ 0.5
DBP2	YNL112W	VMS1	Q04311	632 aa	Known RBP	18.15	■□□□□ 0.5
DBP2	YNL112W	SUE1	Q06524	206 aa		18.15	■□□□□ 0.5
DBP2	YNL112W	CSC1	Q06538	782 aa		18.15	■□□□□ 0.5
DBP2	YNL112W	MCM4	P30665	933 aa	Known RBP	18.14	■□□□□ 0.49
DBP2	YNL112W	RKM3	P38222	552 aa		18.14	■□□□□ 0.49
DBP2	YNL112W	UBP9	P39967	754 aa		18.14	■□□□□ 0.49
DBP2	YNL112W	SNU71	P53207	620 aa	Known RBP	18.14	■□□□□ 0.49
DBP2	YNL112W	URA1	P28272	314 aa	Predicted RBP	18.13	■□□□□ 0.49
DBP2	YNL112W	YGL138C	P53122	345 aa		18.13	■□□□□ 0.49
DBP2	YNL112W	GPA1	P08539	472 aa		18.12	■□□□□ 0.49
DBP2	YNL112W	KRS1	P15180	591 aa	Known RBP	18.12	■□□□□ 0.49
DBP2	YNL112W	YER130C	P39959	443 aa		18.12	■□□□□ 0.49
DBP2	YNL112W	PUS5	Q06244	254 aa		18.12	■□□□□ 0.49
DBP2	YNL112W	CLF1	Q12309	687 aa	Predicted RBP	18.12	■□□□□ 0.49
DBP2	YNL112W	PTC5	Q12511	572 aa		18.12	■□□□□ 0.49
DBP2	YNL112W	TOM71	P38825	639 aa	Known RBP	18.12	■□□□□ 0.49
DBP2	YNL112W	RFT1	P38206	574 aa	Predicted RBP	18.11	■□□□□ 0.49
DBP2	YNL112W	NPR3	P38742	1146 aa		18.11	■□□□□ 0.49
DBP2	YNL112W	NAF1	P53919	492 aa	Known RBP	18.11	■□□□□ 0.49
DBP2	YNL112W	VPS45	P38932	577 aa		18.1	■□□□□ 0.49
DBP2	YNL112W	ASE1	P50275	885 aa		18.1	■□□□□ 0.49
DBP2	YNL112W	EIS1	Q05050	843 aa	Known RBP	18.1	■□□□□ 0.49
DBP2	YNL112W	SMD2	Q06217	110 aa	Known RBP	18.1	■□□□□ 0.49
DBP2	YNL112W	CSR2	Q12734	1121 aa		18.1	■□□□□ 0.49
DBP2	YNL112W	TIF4631	P39935	952 aa	Known RBP	18.09	■□□□□ 0.49
DBP2	YNL112W	YPT11	P48559	417 aa		18.09	■□□□□ 0.49
DBP2	YNL112W	SSL2	Q00578	843 aa		18.09	■□□□□ 0.49
DBP2	YNL112W	CEX1	Q12453	761 aa		18.09	■□□□□ 0.49
DBP2	YNL112W	MAK11	P20484	414 aa	Known RBP	18.08	■□□□□ 0.48
DBP2	YNL112W	TPS3	P38426	1054 aa	Known RBP	18.08	■□□□□ 0.48
DBP2	YNL112W	ACA1	P39970	489 aa		18.08	■□□□□ 0.48
DBP2	YNL112W	SGD1	Q06132	899 aa		18.08	■□□□□ 0.48
DBP2	YNL112W	ETT1	Q08421	412 aa	Known RBP	18.08	■□□□□ 0.48
DBP2	YNL112W	NBL1	Q3E7Y6	73 aa		18.08	■□□□□ 0.48
DBP2	YNL112W	ASF1	P32447	279 aa		18.07	■□□□□ 0.48
DBP2	YNL112W	LCD1	Q04377	747 aa		18.07	■□□□□ 0.48

Retrieved 100 of 5,963 RNA–protein pairs in 70.6 ms