RNA–Protein interactions for RNA: YGR058W

PEF1, Transcript of Penta-EF-hand protein, yeastyeast

Gene PEF1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEF1YGR058W BRE4Q07660 1125 aa6.56□□□□□ -1.36
PEF1YGR058W SPO74P45819 413 aa6.55□□□□□ -1.36
PEF1YGR058W DOT1Q04089 582 aaKnown RBP6.55□□□□□ -1.36
PEF1YGR058W MAG2Q06436 670 aaKnown RBP6.55□□□□□ -1.36
PEF1YGR058W UGA4P32837 571 aa6.54□□□□□ -1.36
PEF1YGR058W SSF1P38789 453 aaPredicted RBP6.54□□□□□ -1.36
PEF1YGR058W NUT1P53114 1132 aa6.54□□□□□ -1.36
PEF1YGR058W EAR1Q03212 550 aa6.54□□□□□ -1.36
PEF1YGR058W TOS4Q06266 489 aa6.54□□□□□ -1.36
PEF1YGR058W PUB1P32588 453 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
PEF1YGR058W FAR11P53917 953 aa6.53□□□□□ -1.36
PEF1YGR058W MSH6Q03834 1242 aa6.53□□□□□ -1.36
PEF1YGR058W YOR223WQ12015 292 aa6.53□□□□□ -1.36
PEF1YGR058W PRP5P21372 849 aaPredicted RBP6.52□□□□□ -1.37
PEF1YGR058W MCM5P29496 775 aaKnown RBP6.52□□□□□ -1.37
PEF1YGR058W YHL050CP38721 697 aa6.52□□□□□ -1.37
PEF1YGR058W YHR219WP38900 624 aa6.52□□□□□ -1.37
PEF1YGR058W AVT1P47082 602 aa6.52□□□□□ -1.37
PEF1YGR058W YIG1Q08956 461 aa6.52□□□□□ -1.37
PEF1YGR058W YAF9P53930 226 aa6.51□□□□□ -1.37
PEF1YGR058W SAP155P43612 1002 aa6.49□□□□□ -1.37
PEF1YGR058W UTP22P53254 1237 aaPredicted RBP6.49□□□□□ -1.37
PEF1YGR058W MSB1P21339 1137 aaKnown RBP6.48□□□□□ -1.37
PEF1YGR058W LRG1P35688 1017 aa6.48□□□□□ -1.37
PEF1YGR058W REI1P38344 393 aaPredicted RBP6.48□□□□□ -1.37
PEF1YGR058W NMD3P38861 518 aaKnown RBP6.48□□□□□ -1.37
PEF1YGR058W SLS1P42900 643 aa6.48□□□□□ -1.37
PEF1YGR058W GCV1P48015 400 aa6.48□□□□□ -1.37
PEF1YGR058W ELA1P53861 379 aaPredicted RBP6.48□□□□□ -1.37
PEF1YGR058W NOC3Q07896 663 aaPredicted RBP6.48□□□□□ -1.37
PEF1YGR058W MSH4P40965 878 aaPredicted RBP6.47□□□□□ -1.37
PEF1YGR058W MEC3Q02574 474 aa6.47□□□□□ -1.37
PEF1YGR058W MMM1P41800 426 aa6.46□□□□□ -1.38
PEF1YGR058W YGR045CP53229 120 aa6.46□□□□□ -1.38
PEF1YGR058W WHI5Q12416 295 aa6.46□□□□□ -1.38
PEF1YGR058W RPS4AP0CX35 261 aaKnown RBP6.45□□□□□ -1.38
PEF1YGR058W RPS4BP0CX36 261 aaKnown RBP6.45□□□□□ -1.38
PEF1YGR058W EXO5P38289 585 aa6.45□□□□□ -1.38
PEF1YGR058W SAM37P50110 327 aa6.45□□□□□ -1.38
PEF1YGR058W PMT7Q06644 662 aa6.45□□□□□ -1.38
PEF1YGR058W MET4P32389 672 aa6.44□□□□□ -1.38
PEF1YGR058W NEM1P38757 446 aa6.44□□□□□ -1.38
PEF1YGR058W RNQ1P25367 405 aa6.43□□□□□ -1.38
PEF1YGR058W STM1P39015 273 aaKnown RBP6.43□□□□□ -1.38
PEF1YGR058W RCM1P53972 490 aa6.43□□□□□ -1.38
PEF1YGR058W POL12P38121 705 aaPredicted RBP6.42□□□□□ -1.38
PEF1YGR058W PPX1P38698 397 aa6.42□□□□□ -1.38
PEF1YGR058W CIC1P38779 376 aaKnown RBP6.42□□□□□ -1.38
PEF1YGR058W OYE3P41816 400 aaPredicted RBP6.42□□□□□ -1.38
PEF1YGR058W MSC6Q08818 692 aaKnown RBP6.42□□□□□ -1.38
PEF1YGR058W PHO4P07270 312 aaKnown RBP6.41□□□□□ -1.38
PEF1YGR058W SEG2P34250 1132 aa6.41□□□□□ -1.38
PEF1YGR058W CIT3P43635 486 aa6.41□□□□□ -1.38
PEF1YGR058W DAL4Q04895 635 aa6.41□□□□□ -1.38
PEF1YGR058W RVS167P39743 482 aaKnown RBP6.4□□□□□ -1.38
PEF1YGR058W PEX13P80667 386 aa6.4□□□□□ -1.38
PEF1YGR058W YCS4Q06156 1176 aa6.4□□□□□ -1.38
PEF1YGR058W NFS1P25374 497 aa6.39□□□□□ -1.39
PEF1YGR058W PRP40P33203 583 aaKnown RBP6.39□□□□□ -1.39
PEF1YGR058W THI12P42883 340 aa6.39□□□□□ -1.39
PEF1YGR058W THI5P43534 340 aa6.39□□□□□ -1.39
PEF1YGR058W DAK2P43550 591 aa6.39□□□□□ -1.39
PEF1YGR058W THI11P47183 340 aa6.39□□□□□ -1.39
PEF1YGR058W THI13Q07748 340 aa6.39□□□□□ -1.39
PEF1YGR058W YLL054CQ12244 843 aa6.39□□□□□ -1.39
PEF1YGR058W IPL1P38991 367 aa6.38□□□□□ -1.39
PEF1YGR058W ALT1P52893 592 aa6.38□□□□□ -1.39
PEF1YGR058W YNR063WP53749 607 aa6.38□□□□□ -1.39
PEF1YGR058W AVO1Q08236 1176 aa6.38□□□□□ -1.39
PEF1YGR058W YVC1Q12324 675 aa6.38□□□□□ -1.39
PEF1YGR058W HEM13P11353 328 aaKnown RBP6.37□□□□□ -1.39
PEF1YGR058W MSH3P25336 1018 aa6.37□□□□□ -1.39
PEF1YGR058W GCD6P32501 712 aaKnown RBP6.37□□□□□ -1.39
PEF1YGR058W FAA3P39002 694 aa6.37□□□□□ -1.39
PEF1YGR058W IRC24P40580 263 aa6.37□□□□□ -1.39
PEF1YGR058W SEN54Q02825 467 aaPredicted RBP6.37□□□□□ -1.39
PEF1YGR058W SSY1Q03770 852 aa6.37□□□□□ -1.39
PEF1YGR058W HSP78P33416 811 aa6.36□□□□□ -1.39
PEF1YGR058W VPS35P34110 944 aa6.36□□□□□ -1.39
PEF1YGR058W YKL077WP36081 392 aa6.36□□□□□ -1.39
PEF1YGR058W ULP1Q02724 621 aa6.36□□□□□ -1.39
PEF1YGR058W PEX7P39108 375 aa6.35□□□□□ -1.39
PEF1YGR058W UTP5Q04177 643 aaKnown RBP6.35□□□□□ -1.39
PEF1YGR058W DFG16Q99234 619 aa6.35□□□□□ -1.39
PEF1YGR058W SEC20P28791 383 aa6.34□□□□□ -1.39
PEF1YGR058W SMY2P32909 740 aaKnown RBP6.34□□□□□ -1.39
PEF1YGR058W XKS1P42826 600 aa6.34□□□□□ -1.39
PEF1YGR058W PRO1P32264 428 aa6.33□□□□□ -1.4
PEF1YGR058W RSM26P47141 266 aa6.33□□□□□ -1.4
PEF1YGR058W NOG1Q02892 647 aaKnown RBP6.33□□□□□ -1.4
PEF1YGR058W TPP1Q03796 238 aa6.33□□□□□ -1.4
PEF1YGR058W ARL1P38116 183 aaKnown RBP6.32□□□□□ -1.4
PEF1YGR058W PTC7P38797 343 aa6.32□□□□□ -1.4
PEF1YGR058W PEX28P38848 579 aa6.32□□□□□ -1.4
PEF1YGR058W SHU2P38957 223 aa6.32□□□□□ -1.4
PEF1YGR058W YAR028WP39548 234 aa6.32□□□□□ -1.4
PEF1YGR058W GTS1P40956 396 aa6.32□□□□□ -1.4
PEF1YGR058W TRE1Q08919 783 aa6.32□□□□□ -1.4
PEF1YGR058W RPT1P33299 467 aaKnown RBP6.31□□□□□ -1.4
PEF1YGR058W YLR257WQ06146 321 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms