Protein–RNA interactions for Protein: P48015

GCV1, Aminomethyltransferase, mitochondrial, yeastyeast

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GCV1P48015 YML009W-BYML009W-B 477 nt19.93■□□□□ 0.78
GCV1P48015 NSR1YGR159C 1245 nt19.76■□□□□ 0.75
GCV1P48015 NOP1YDL014W 984 nt19.34■□□□□ 0.69
GCV1P48015 YKL036CYKL036C 393 nt17.9■□□□□ 0.46
GCV1P48015 MDJ1YFL016C 1536 nt17.57■□□□□ 0.4
GCV1P48015 Q0297Q0297 156 nt16.97■□□□□ 0.31
GCV1P48015 SRX1YKL086W 384 nt16.93■□□□□ 0.3
GCV1P48015 YJL027CYJL027C 417 nt16.71■□□□□ 0.27
GCV1P48015 SCS3YGL126W 1143 nt16.32■□□□□ 0.2
GCV1P48015 YCR051WYCR051W 669 nt16.05■□□□□ 0.16
GCV1P48015 DBP2YNL112W 1641 nt15.55■□□□□ 0.08
GCV1P48015 YOL085CYOL085C 342 nt15.51■□□□□ 0.07
GCV1P48015 TRN1tP(UGG)A 72 nt15.32■□□□□ 0.04
GCV1P48015 SUF9tP(UGG)F 72 nt15.32■□□□□ 0.04
GCV1P48015 SUF8tP(UGG)H 72 nt15.32■□□□□ 0.04
GCV1P48015 tP(UGG)LtP(UGG)L 72 nt15.32■□□□□ 0.04
GCV1P48015 SUF7tP(UGG)M 72 nt15.32■□□□□ 0.04
GCV1P48015 tP(UGG)N1tP(UGG)N1 72 nt15.32■□□□□ 0.04
GCV1P48015 tP(UGG)N2tP(UGG)N2 72 nt15.32■□□□□ 0.04
GCV1P48015 tP(UGG)O1tP(UGG)O1 72 nt15.32■□□□□ 0.04
GCV1P48015 SUF11tP(UGG)O2 72 nt15.32■□□□□ 0.04
GCV1P48015 PKP1YIL042C 1185 nt15.28■□□□□ 0.04
GCV1P48015 RPP1BYDL130W 321 nt15.22■□□□□ 0.03
GCV1P48015 CCC1YLR220W 969 nt15.13■□□□□ 0.01
GCV1P48015 YBR190WYBR190W 312 nt14.94□□□□□ -0.02
GCV1P48015 RTC3YHR087W 336 nt14.59□□□□□ -0.07
GCV1P48015 ATS1YAL020C 1002 nt14.59□□□□□ -0.07
GCV1P48015 SCJ1YMR214W 1134 nt14.58□□□□□ -0.08
GCV1P48015 RVS167YDR388W 1449 nt14.58□□□□□ -0.08
GCV1P48015 PET122YER153C 765 nt14.56□□□□□ -0.08
GCV1P48015 tP(UGG)O3tP(UGG)O3 72 nt14.48□□□□□ -0.09
GCV1P48015 SCR1SCR1 522 nt14.37□□□□□ -0.11
GCV1P48015 RRN5YLR141W 1092 nt14.13□□□□□ -0.15
GCV1P48015 SHR5YOL110W 714 nt14.1□□□□□ -0.15
GCV1P48015 YDJ1YNL064C 1230 nt14.01□□□□□ -0.17
GCV1P48015 YER088W-BYER088W-B 147 nt13.86□□□□□ -0.19
GCV1P48015 RSB1YOR049C 1065 nt13.84□□□□□ -0.19
GCV1P48015 DEP1YAL013W 1218 nt13.7□□□□□ -0.22
GCV1P48015 URN1YPR152C 1398 nt13.7□□□□□ -0.22
GCV1P48015 GAR1YHR089C 618 nt13.69□□□□□ -0.22
GCV1P48015 SSA3YBL075C 1950 nt13.6□□□□□ -0.23
GCV1P48015 PUT4YOR348C 1884 nt13.57□□□□□ -0.24
GCV1P48015 PST2YDR032C 597 nt13.51□□□□□ -0.25
GCV1P48015 OPI9YLR338W 858 nt13.49□□□□□ -0.25
GCV1P48015 RPN10YHR200W 807 nt13.47□□□□□ -0.25
GCV1P48015 YNL208WYNL208W 600 nt13.47□□□□□ -0.25
GCV1P48015 SAH1YER043C 1350 nt13.41□□□□□ -0.26
GCV1P48015 ARE1YCR048W 1833 nt13.33□□□□□ -0.28
GCV1P48015 TIR1YER011W 765 nt13.23□□□□□ -0.29
GCV1P48015 Q0182Q0182 405 nt13.22□□□□□ -0.29
GCV1P48015 YHR049C-AYHR049C-A 297 nt13.17□□□□□ -0.3
GCV1P48015 POA1YBR022W 534 nt13.13□□□□□ -0.31
GCV1P48015 PUN1YLR414C 792 nt13.1□□□□□ -0.31
GCV1P48015 SSA1YAL005C 1929 nt13.08□□□□□ -0.32
GCV1P48015 YJR018WYJR018W 363 nt13.06□□□□□ -0.32
GCV1P48015 YKL097CYKL097C 411 nt12.98□□□□□ -0.33
GCV1P48015 MOT3YMR070W 1473 nt12.97□□□□□ -0.33
GCV1P48015 SHU1YHL006C 453 nt12.97□□□□□ -0.33
GCV1P48015 YJR120WYJR120W 351 nt12.93□□□□□ -0.34
GCV1P48015 PTC2YER089C 1395 nt12.93□□□□□ -0.34
GCV1P48015 SRB2YHR041C 633 nt12.91□□□□□ -0.34
GCV1P48015 BSC6YOL137W 1494 nt12.85□□□□□ -0.35
GCV1P48015 BUD23YCR047C 828 nt12.84□□□□□ -0.35
GCV1P48015 RPP2BYDR382W 333 nt12.78□□□□□ -0.36
GCV1P48015 YAL037C-BYAL037C-B 975 nt12.75□□□□□ -0.37
GCV1P48015 NAB2YGL122C 1578 nt12.74□□□□□ -0.37
GCV1P48015 WWM1YFL010C 636 nt12.66□□□□□ -0.38
GCV1P48015 FIS1YIL065C 468 nt12.63□□□□□ -0.39
GCV1P48015 DAL1YIR027C 1383 nt12.6□□□□□ -0.39
GCV1P48015 YGR021WYGR021W 873 nt12.58□□□□□ -0.4
GCV1P48015 INM2YDR287W 879 nt12.57□□□□□ -0.4
GCV1P48015 HOM6YJR139C 1080 nt12.56□□□□□ -0.4
GCV1P48015 BDH2YAL061W 1254 nt12.56□□□□□ -0.4
GCV1P48015 FPR4YLR449W 1179 nt12.55□□□□□ -0.4
GCV1P48015 MNP1YGL068W 585 nt12.52□□□□□ -0.41
GCV1P48015 PHO4YFR034C 939 nt12.49□□□□□ -0.41
GCV1P48015 YOR139CYOR139C 393 nt12.49□□□□□ -0.41
GCV1P48015 YBL100CYBL100C 315 nt12.48□□□□□ -0.41
GCV1P48015 YFL021C-AYFL021C-A 855 nt12.45□□□□□ -0.42
GCV1P48015 RKM5YLR137W 1104 nt12.38□□□□□ -0.43
GCV1P48015 LSM3YLR438C-A 270 nt12.38□□□□□ -0.43
GCV1P48015 NPL3YDR432W 1245 nt12.34□□□□□ -0.43
GCV1P48015 FUN26YAL022C 1554 nt12.34□□□□□ -0.43
GCV1P48015 YOL037CYOL037C 354 nt12.3□□□□□ -0.44
GCV1P48015 TRM9YML014W 840 nt12.28□□□□□ -0.44
GCV1P48015 YPS1YLR120C 1710 nt12.23□□□□□ -0.45
GCV1P48015 SPT5YML010W 3192 nt12.22□□□□□ -0.45
GCV1P48015 CCT6YDR188W 1641 nt12.19□□□□□ -0.46
GCV1P48015 YDR095CYDR095C 411 nt12.18□□□□□ -0.46
GCV1P48015 ALF1YNL148C 765 nt12.13□□□□□ -0.47
GCV1P48015 SSA4YER103W 1929 nt12.13□□□□□ -0.47
GCV1P48015 YHR165W-AYHR165W-A 312 nt12.08□□□□□ -0.48
GCV1P48015 SUF2tP(AGG)C 72 nt12.06□□□□□ -0.48
GCV1P48015 SUF10tP(AGG)N 72 nt12.06□□□□□ -0.48
GCV1P48015 MEP2YNL142W 1500 nt12.06□□□□□ -0.48
GCV1P48015 YLR281CYLR281C 468 nt12.01□□□□□ -0.49
GCV1P48015 tM(CAU)CtM(CAU)C 72 nt11.99□□□□□ -0.49
GCV1P48015 IMT4tM(CAU)E 72 nt11.99□□□□□ -0.49
GCV1P48015 IMT3tM(CAU)J3 72 nt11.99□□□□□ -0.49
GCV1P48015 IMT1tM(CAU)O1 72 nt11.99□□□□□ -0.49
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms