Protein–RNA interactions for Protein: P47082

AVT1, Vacuolar amino acid transporter 1, yeastyeast

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AVT1P47082 YML009W-BYML009W-B 477 nt22.5■■□□□ 1.19
AVT1P47082 NSR1YGR159C 1245 nt22.21■■□□□ 1.15
AVT1P47082 NOP1YDL014W 984 nt21.86■■□□□ 1.09
AVT1P47082 YKL036CYKL036C 393 nt20.37■□□□□ 0.85
AVT1P47082 MDJ1YFL016C 1536 nt19.65■□□□□ 0.74
AVT1P47082 Q0297Q0297 156 nt19.26■□□□□ 0.67
AVT1P47082 SRX1YKL086W 384 nt19.17■□□□□ 0.66
AVT1P47082 YJL027CYJL027C 417 nt19.04■□□□□ 0.64
AVT1P47082 SCS3YGL126W 1143 nt18.66■□□□□ 0.58
AVT1P47082 YCR051WYCR051W 669 nt18.18■□□□□ 0.5
AVT1P47082 YOL085CYOL085C 342 nt17.67■□□□□ 0.42
AVT1P47082 DBP2YNL112W 1641 nt17.49■□□□□ 0.39
AVT1P47082 PKP1YIL042C 1185 nt17.41■□□□□ 0.38
AVT1P47082 TRN1tP(UGG)A 72 nt17.28■□□□□ 0.36
AVT1P47082 SUF9tP(UGG)F 72 nt17.28■□□□□ 0.36
AVT1P47082 SUF8tP(UGG)H 72 nt17.28■□□□□ 0.36
AVT1P47082 tP(UGG)LtP(UGG)L 72 nt17.28■□□□□ 0.36
AVT1P47082 SUF7tP(UGG)M 72 nt17.28■□□□□ 0.36
AVT1P47082 tP(UGG)N1tP(UGG)N1 72 nt17.28■□□□□ 0.36
AVT1P47082 tP(UGG)N2tP(UGG)N2 72 nt17.28■□□□□ 0.36
AVT1P47082 tP(UGG)O1tP(UGG)O1 72 nt17.28■□□□□ 0.36
AVT1P47082 SUF11tP(UGG)O2 72 nt17.28■□□□□ 0.36
AVT1P47082 RPP1BYDL130W 321 nt17.27■□□□□ 0.36
AVT1P47082 CCC1YLR220W 969 nt17.07■□□□□ 0.32
AVT1P47082 ATS1YAL020C 1002 nt16.71■□□□□ 0.27
AVT1P47082 YBR190WYBR190W 312 nt16.66■□□□□ 0.26
AVT1P47082 SCJ1YMR214W 1134 nt16.65■□□□□ 0.26
AVT1P47082 PET122YER153C 765 nt16.52■□□□□ 0.24
AVT1P47082 tP(UGG)O3tP(UGG)O3 72 nt16.38■□□□□ 0.21
AVT1P47082 RVS167YDR388W 1449 nt16.34■□□□□ 0.21
AVT1P47082 SCR1SCR1 522 nt16.29■□□□□ 0.2
AVT1P47082 RTC3YHR087W 336 nt16.27■□□□□ 0.2
AVT1P47082 RRN5YLR141W 1092 nt16.05■□□□□ 0.16
AVT1P47082 SHR5YOL110W 714 nt15.85■□□□□ 0.13
AVT1P47082 YDJ1YNL064C 1230 nt15.82■□□□□ 0.12
AVT1P47082 YER088W-BYER088W-B 147 nt15.74■□□□□ 0.11
AVT1P47082 RSB1YOR049C 1065 nt15.73■□□□□ 0.11
AVT1P47082 PST2YDR032C 597 nt15.47■□□□□ 0.07
AVT1P47082 GAR1YHR089C 618 nt15.46■□□□□ 0.07
AVT1P47082 DEP1YAL013W 1218 nt15.38■□□□□ 0.05
AVT1P47082 URN1YPR152C 1398 nt15.33■□□□□ 0.04
AVT1P47082 YNL208WYNL208W 600 nt15.11■□□□□ 0.01
AVT1P47082 PUT4YOR348C 1884 nt15.08■□□□□ 0
AVT1P47082 OPI9YLR338W 858 nt15.07■□□□□ 0
AVT1P47082 RPN10YHR200W 807 nt15.06■□□□□ 0
AVT1P47082 SAH1YER043C 1350 nt14.97□□□□□ -0.01
AVT1P47082 TIR1YER011W 765 nt14.93□□□□□ -0.02
AVT1P47082 YKL097CYKL097C 411 nt14.89□□□□□ -0.03
AVT1P47082 ARE1YCR048W 1833 nt14.86□□□□□ -0.03
AVT1P47082 SHU1YHL006C 453 nt14.83□□□□□ -0.04
AVT1P47082 SSA1YAL005C 1929 nt14.77□□□□□ -0.04
AVT1P47082 SRB2YHR041C 633 nt14.64□□□□□ -0.07
AVT1P47082 YHR049C-AYHR049C-A 297 nt14.63□□□□□ -0.07
AVT1P47082 YJR018WYJR018W 363 nt14.62□□□□□ -0.07
AVT1P47082 PUN1YLR414C 792 nt14.61□□□□□ -0.07
AVT1P47082 POA1YBR022W 534 nt14.59□□□□□ -0.07
AVT1P47082 YJR120WYJR120W 351 nt14.55□□□□□ -0.08
AVT1P47082 YAL037C-BYAL037C-B 975 nt14.55□□□□□ -0.08
AVT1P47082 PTC2YER089C 1395 nt14.44□□□□□ -0.1
AVT1P47082 YOR139CYOR139C 393 nt14.35□□□□□ -0.11
AVT1P47082 WWM1YFL010C 636 nt14.33□□□□□ -0.12
AVT1P47082 RPP2BYDR382W 333 nt14.31□□□□□ -0.12
AVT1P47082 BUD23YCR047C 828 nt14.27□□□□□ -0.13
AVT1P47082 BSC6YOL137W 1494 nt14.25□□□□□ -0.13
AVT1P47082 HOM6YJR139C 1080 nt14.25□□□□□ -0.13
AVT1P47082 MNP1YGL068W 585 nt14.23□□□□□ -0.13
AVT1P47082 SSA3YBL075C 1950 nt14.22□□□□□ -0.13
AVT1P47082 YGR021WYGR021W 873 nt14.22□□□□□ -0.13
AVT1P47082 NAB2YGL122C 1578 nt14.2□□□□□ -0.14
AVT1P47082 BDH2YAL061W 1254 nt14.11□□□□□ -0.15
AVT1P47082 NPL3YDR432W 1245 nt14.1□□□□□ -0.15
AVT1P47082 FIS1YIL065C 468 nt14.09□□□□□ -0.15
AVT1P47082 DAL1YIR027C 1383 nt14.06□□□□□ -0.16
AVT1P47082 YFL021C-AYFL021C-A 855 nt14.05□□□□□ -0.16
AVT1P47082 INM2YDR287W 879 nt14.04□□□□□ -0.16
AVT1P47082 RKM5YLR137W 1104 nt14.03□□□□□ -0.16
AVT1P47082 FPR4YLR449W 1179 nt14.01□□□□□ -0.17
AVT1P47082 YOL037CYOL037C 354 nt13.98□□□□□ -0.17
AVT1P47082 YBL100CYBL100C 315 nt13.97□□□□□ -0.17
AVT1P47082 PHO4YFR034C 939 nt13.95□□□□□ -0.18
AVT1P47082 LSM3YLR438C-A 270 nt13.93□□□□□ -0.18
AVT1P47082 FUN26YAL022C 1554 nt13.83□□□□□ -0.2
AVT1P47082 TRM9YML014W 840 nt13.78□□□□□ -0.2
AVT1P47082 tM(CAU)CtM(CAU)C 72 nt13.76□□□□□ -0.21
AVT1P47082 IMT4tM(CAU)E 72 nt13.76□□□□□ -0.21
AVT1P47082 IMT3tM(CAU)J3 72 nt13.76□□□□□ -0.21
AVT1P47082 IMT1tM(CAU)O1 72 nt13.76□□□□□ -0.21
AVT1P47082 IMT2tM(CAU)P 72 nt13.76□□□□□ -0.21
AVT1P47082 CCT6YDR188W 1641 nt13.68□□□□□ -0.22
AVT1P47082 YLR281CYLR281C 468 nt13.68□□□□□ -0.22
AVT1P47082 YPS1YLR120C 1710 nt13.63□□□□□ -0.23
AVT1P47082 WHI5YOR083W 888 nt13.61□□□□□ -0.23
AVT1P47082 PUS2YGL063W 1113 nt13.58□□□□□ -0.24
AVT1P47082 YDR095CYDR095C 411 nt13.57□□□□□ -0.24
AVT1P47082 SPT5YML010W 3192 nt13.55□□□□□ -0.24
AVT1P47082 ALF1YNL148C 765 nt13.54□□□□□ -0.24
AVT1P47082 SUF2tP(AGG)C 72 nt13.48□□□□□ -0.25
AVT1P47082 SUF10tP(AGG)N 72 nt13.48□□□□□ -0.25
AVT1P47082 YLR154C-GYLR154C-G 150 nt13.47□□□□□ -0.25
AVT1P47082 YHR165W-AYHR165W-A 312 nt13.42□□□□□ -0.26
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms