Protein–RNA interactions for Protein: P42826

XKS1, Xylulose kinase, yeastyeast

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XKS1P42826 YML009W-BYML009W-B 477 nt26.84■■□□□ 1.89
XKS1P42826 NOP1YDL014W 984 nt26.24■■□□□ 1.79
XKS1P42826 NSR1YGR159C 1245 nt26.16■■□□□ 1.78
XKS1P42826 YKL036CYKL036C 393 nt24.75■■□□□ 1.55
XKS1P42826 YJL027CYJL027C 417 nt23.21■■□□□ 1.31
XKS1P42826 Q0297Q0297 156 nt23.18■■□□□ 1.3
XKS1P42826 SRX1YKL086W 384 nt22.96■■□□□ 1.27
XKS1P42826 SCS3YGL126W 1143 nt22.83■■□□□ 1.25
XKS1P42826 MDJ1YFL016C 1536 nt22.8■■□□□ 1.24
XKS1P42826 YCR051WYCR051W 669 nt21.85■■□□□ 1.09
XKS1P42826 YOL085CYOL085C 342 nt21.45■■□□□ 1.02
XKS1P42826 PKP1YIL042C 1185 nt21.1■□□□□ 0.97
XKS1P42826 SCJ1YMR214W 1134 nt20.82■□□□□ 0.92
XKS1P42826 RPP1BYDL130W 321 nt20.8■□□□□ 0.92
XKS1P42826 ATS1YAL020C 1002 nt20.55■□□□□ 0.88
XKS1P42826 TRN1tP(UGG)A 72 nt20.47■□□□□ 0.87
XKS1P42826 SUF9tP(UGG)F 72 nt20.47■□□□□ 0.87
XKS1P42826 SUF8tP(UGG)H 72 nt20.47■□□□□ 0.87
XKS1P42826 tP(UGG)LtP(UGG)L 72 nt20.47■□□□□ 0.87
XKS1P42826 SUF7tP(UGG)M 72 nt20.47■□□□□ 0.87
XKS1P42826 tP(UGG)N1tP(UGG)N1 72 nt20.47■□□□□ 0.87
XKS1P42826 tP(UGG)N2tP(UGG)N2 72 nt20.47■□□□□ 0.87
XKS1P42826 tP(UGG)O1tP(UGG)O1 72 nt20.47■□□□□ 0.87
XKS1P42826 SUF11tP(UGG)O2 72 nt20.47■□□□□ 0.87
XKS1P42826 DBP2YNL112W 1641 nt20.38■□□□□ 0.85
XKS1P42826 CCC1YLR220W 969 nt20.29■□□□□ 0.84
XKS1P42826 PET122YER153C 765 nt19.85■□□□□ 0.77
XKS1P42826 SCR1SCR1 522 nt19.72■□□□□ 0.75
XKS1P42826 tP(UGG)O3tP(UGG)O3 72 nt19.54■□□□□ 0.72
XKS1P42826 RRN5YLR141W 1092 nt19.33■□□□□ 0.68
XKS1P42826 YBR190WYBR190W 312 nt19.24■□□□□ 0.67
XKS1P42826 RVS167YDR388W 1449 nt19.21■□□□□ 0.67
XKS1P42826 RSB1YOR049C 1065 nt19.08■□□□□ 0.64
XKS1P42826 RTC3YHR087W 336 nt19■□□□□ 0.63
XKS1P42826 PST2YDR032C 597 nt18.95■□□□□ 0.62
XKS1P42826 YER088W-BYER088W-B 147 nt18.95■□□□□ 0.62
XKS1P42826 YDJ1YNL064C 1230 nt18.87■□□□□ 0.61
XKS1P42826 SHR5YOL110W 714 nt18.7■□□□□ 0.58
XKS1P42826 YKL097CYKL097C 411 nt18.47■□□□□ 0.55
XKS1P42826 GAR1YHR089C 618 nt18.41■□□□□ 0.54
XKS1P42826 SHU1YHL006C 453 nt18.08■□□□□ 0.48
XKS1P42826 DEP1YAL013W 1218 nt18.05■□□□□ 0.48
XKS1P42826 URN1YPR152C 1398 nt17.87■□□□□ 0.45
XKS1P42826 YNL208WYNL208W 600 nt17.76■□□□□ 0.43
XKS1P42826 TIR1YER011W 765 nt17.75■□□□□ 0.43
XKS1P42826 YOR139CYOR139C 393 nt17.68■□□□□ 0.42
XKS1P42826 RPN10YHR200W 807 nt17.67■□□□□ 0.42
XKS1P42826 YAL037C-BYAL037C-B 975 nt17.66■□□□□ 0.42
XKS1P42826 OPI9YLR338W 858 nt17.48■□□□□ 0.39
XKS1P42826 SSA1YAL005C 1929 nt17.45■□□□□ 0.38
XKS1P42826 NPL3YDR432W 1245 nt17.35■□□□□ 0.37
XKS1P42826 SRB2YHR041C 633 nt17.33■□□□□ 0.36
XKS1P42826 SAH1YER043C 1350 nt17.27■□□□□ 0.35
XKS1P42826 MNP1YGL068W 585 nt17.14■□□□□ 0.33
XKS1P42826 HOM6YJR139C 1080 nt17.1■□□□□ 0.33
XKS1P42826 WWM1YFL010C 636 nt17.09■□□□□ 0.33
XKS1P42826 PUT4YOR348C 1884 nt17.08■□□□□ 0.33
XKS1P42826 YGR021WYGR021W 873 nt17.08■□□□□ 0.32
XKS1P42826 YJR018WYJR018W 363 nt17.07■□□□□ 0.32
XKS1P42826 YJR120WYJR120W 351 nt16.99■□□□□ 0.31
XKS1P42826 YOL037CYOL037C 354 nt16.99■□□□□ 0.31
XKS1P42826 PUN1YLR414C 792 nt16.96■□□□□ 0.31
XKS1P42826 ARE1YCR048W 1833 nt16.95■□□□□ 0.3
XKS1P42826 tM(CAU)CtM(CAU)C 72 nt16.93■□□□□ 0.3
XKS1P42826 IMT4tM(CAU)E 72 nt16.93■□□□□ 0.3
XKS1P42826 IMT3tM(CAU)J3 72 nt16.93■□□□□ 0.3
XKS1P42826 IMT1tM(CAU)O1 72 nt16.93■□□□□ 0.3
XKS1P42826 IMT2tM(CAU)P 72 nt16.93■□□□□ 0.3
XKS1P42826 RKM5YLR137W 1104 nt16.85■□□□□ 0.29
XKS1P42826 RPP2BYDR382W 333 nt16.83■□□□□ 0.28
XKS1P42826 YFL021C-AYFL021C-A 855 nt16.76■□□□□ 0.27
XKS1P42826 YHR049C-AYHR049C-A 297 nt16.74■□□□□ 0.27
XKS1P42826 SSA3YBL075C 1950 nt16.71■□□□□ 0.27
XKS1P42826 PTC2YER089C 1395 nt16.69■□□□□ 0.26
XKS1P42826 PUS2YGL063W 1113 nt16.62■□□□□ 0.25
XKS1P42826 POA1YBR022W 534 nt16.62■□□□□ 0.25
XKS1P42826 BDH2YAL061W 1254 nt16.61■□□□□ 0.25
XKS1P42826 YLR281CYLR281C 468 nt16.59■□□□□ 0.25
XKS1P42826 MOT3YMR070W 1473 nt16.49■□□□□ 0.23
XKS1P42826 LSM3YLR438C-A 270 nt16.49■□□□□ 0.23
XKS1P42826 WHI5YOR083W 888 nt16.46■□□□□ 0.23
XKS1P42826 BUD23YCR047C 828 nt16.39■□□□□ 0.21
XKS1P42826 NAB2YGL122C 1578 nt16.36■□□□□ 0.21
XKS1P42826 INM2YDR287W 879 nt16.36■□□□□ 0.21
XKS1P42826 YBL100CYBL100C 315 nt16.33■□□□□ 0.2
XKS1P42826 FPR4YLR449W 1179 nt16.28■□□□□ 0.2
XKS1P42826 DAL1YIR027C 1383 nt16.27■□□□□ 0.2
XKS1P42826 FIS1YIL065C 468 nt16.25■□□□□ 0.19
XKS1P42826 YPR011CYPR011C 981 nt16.24■□□□□ 0.19
XKS1P42826 FMP45YDL222C 930 nt16.21■□□□□ 0.19
XKS1P42826 TRM9YML014W 840 nt16.2■□□□□ 0.18
XKS1P42826 BSC6YOL137W 1494 nt16.17■□□□□ 0.18
XKS1P42826 YLR236CYLR236C 324 nt16.16■□□□□ 0.18
XKS1P42826 DSK2YMR276W 1122 nt16.16■□□□□ 0.18
XKS1P42826 FUN26YAL022C 1554 nt16.16■□□□□ 0.18
XKS1P42826 PHO4YFR034C 939 nt16.14■□□□□ 0.17
XKS1P42826 YLR154C-GYLR154C-G 150 nt16.06■□□□□ 0.16
XKS1P42826 YCH1YGR203W 447 nt16.05■□□□□ 0.16
XKS1P42826 IMP2'YIL154C 1041 nt16.02■□□□□ 0.16
XKS1P42826 CCT6YDR188W 1641 nt16.01■□□□□ 0.15
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms