Protein–RNA interactions for Protein: P43635

CIT3, Citrate synthase 3, mitochondrial, yeastyeast

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIT3P43635 YML009W-BYML009W-B 477 nt23.07■■□□□ 1.28
CIT3P43635 NSR1YGR159C 1245 nt22.82■■□□□ 1.24
CIT3P43635 NOP1YDL014W 984 nt22.36■■□□□ 1.17
CIT3P43635 YKL036CYKL036C 393 nt20.75■□□□□ 0.91
CIT3P43635 MDJ1YFL016C 1536 nt20.3■□□□□ 0.84
CIT3P43635 Q0297Q0297 156 nt19.65■□□□□ 0.74
CIT3P43635 SRX1YKL086W 384 nt19.6■□□□□ 0.73
CIT3P43635 YJL027CYJL027C 417 nt19.39■□□□□ 0.69
CIT3P43635 SCS3YGL126W 1143 nt18.96■□□□□ 0.63
CIT3P43635 YCR051WYCR051W 669 nt18.6■□□□□ 0.57
CIT3P43635 DBP2YNL112W 1641 nt18.01■□□□□ 0.47
CIT3P43635 YOL085CYOL085C 342 nt18■□□□□ 0.47
CIT3P43635 PKP1YIL042C 1185 nt17.76■□□□□ 0.43
CIT3P43635 TRN1tP(UGG)A 72 nt17.72■□□□□ 0.43
CIT3P43635 SUF9tP(UGG)F 72 nt17.72■□□□□ 0.43
CIT3P43635 SUF8tP(UGG)H 72 nt17.72■□□□□ 0.43
CIT3P43635 tP(UGG)LtP(UGG)L 72 nt17.72■□□□□ 0.43
CIT3P43635 SUF7tP(UGG)M 72 nt17.72■□□□□ 0.43
CIT3P43635 tP(UGG)N1tP(UGG)N1 72 nt17.72■□□□□ 0.43
CIT3P43635 tP(UGG)N2tP(UGG)N2 72 nt17.72■□□□□ 0.43
CIT3P43635 tP(UGG)O1tP(UGG)O1 72 nt17.72■□□□□ 0.43
CIT3P43635 SUF11tP(UGG)O2 72 nt17.72■□□□□ 0.43
CIT3P43635 RPP1BYDL130W 321 nt17.63■□□□□ 0.41
CIT3P43635 CCC1YLR220W 969 nt17.54■□□□□ 0.4
CIT3P43635 YBR190WYBR190W 312 nt17.21■□□□□ 0.35
CIT3P43635 ATS1YAL020C 1002 nt16.95■□□□□ 0.3
CIT3P43635 PET122YER153C 765 nt16.89■□□□□ 0.29
CIT3P43635 SCJ1YMR214W 1134 nt16.88■□□□□ 0.29
CIT3P43635 RTC3YHR087W 336 nt16.84■□□□□ 0.29
CIT3P43635 RVS167YDR388W 1449 nt16.81■□□□□ 0.28
CIT3P43635 tP(UGG)O3tP(UGG)O3 72 nt16.78■□□□□ 0.28
CIT3P43635 SCR1SCR1 522 nt16.63■□□□□ 0.25
CIT3P43635 RRN5YLR141W 1092 nt16.4■□□□□ 0.22
CIT3P43635 SHR5YOL110W 714 nt16.29■□□□□ 0.2
CIT3P43635 YDJ1YNL064C 1230 nt16.19■□□□□ 0.18
CIT3P43635 YER088W-BYER088W-B 147 nt16.08■□□□□ 0.16
CIT3P43635 RSB1YOR049C 1065 nt16.05■□□□□ 0.16
CIT3P43635 GAR1YHR089C 618 nt15.86■□□□□ 0.13
CIT3P43635 DEP1YAL013W 1218 nt15.86■□□□□ 0.13
CIT3P43635 URN1YPR152C 1398 nt15.82■□□□□ 0.12
CIT3P43635 PST2YDR032C 597 nt15.71■□□□□ 0.11
CIT3P43635 PUT4YOR348C 1884 nt15.64■□□□□ 0.09
CIT3P43635 OPI9YLR338W 858 nt15.56■□□□□ 0.08
CIT3P43635 YNL208WYNL208W 600 nt15.55■□□□□ 0.08
CIT3P43635 RPN10YHR200W 807 nt15.51■□□□□ 0.07
CIT3P43635 SAH1YER043C 1350 nt15.48■□□□□ 0.07
CIT3P43635 ARE1YCR048W 1833 nt15.39■□□□□ 0.05
CIT3P43635 TIR1YER011W 765 nt15.31■□□□□ 0.04
CIT3P43635 YHR049C-AYHR049C-A 297 nt15.18■□□□□ 0.02
CIT3P43635 SSA1YAL005C 1929 nt15.16■□□□□ 0.02
CIT3P43635 POA1YBR022W 534 nt15.15■□□□□ 0.02
CIT3P43635 SHU1YHL006C 453 nt15.08■□□□□ 0
CIT3P43635 YJR018WYJR018W 363 nt15.08■□□□□ 0
CIT3P43635 YKL097CYKL097C 411 nt15.08■□□□□ 0
CIT3P43635 PUN1YLR414C 792 nt15.08■□□□□ 0
CIT3P43635 SRB2YHR041C 633 nt15.01□□□□□ -0.01
CIT3P43635 YJR120WYJR120W 351 nt14.97□□□□□ -0.01
CIT3P43635 PTC2YER089C 1395 nt14.93□□□□□ -0.02
CIT3P43635 YAL037C-BYAL037C-B 975 nt14.85□□□□□ -0.03
CIT3P43635 BSC6YOL137W 1494 nt14.82□□□□□ -0.04
CIT3P43635 BUD23YCR047C 828 nt14.81□□□□□ -0.04
CIT3P43635 RPP2BYDR382W 333 nt14.74□□□□□ -0.05
CIT3P43635 WWM1YFL010C 636 nt14.69□□□□□ -0.06
CIT3P43635 NAB2YGL122C 1578 nt14.68□□□□□ -0.06
CIT3P43635 FIS1YIL065C 468 nt14.57□□□□□ -0.08
CIT3P43635 SSA3YBL075C 1950 nt14.56□□□□□ -0.08
CIT3P43635 HOM6YJR139C 1080 nt14.56□□□□□ -0.08
CIT3P43635 MNP1YGL068W 585 nt14.55□□□□□ -0.08
CIT3P43635 YOR139CYOR139C 393 nt14.55□□□□□ -0.08
CIT3P43635 YGR021WYGR021W 873 nt14.54□□□□□ -0.08
CIT3P43635 DAL1YIR027C 1383 nt14.52□□□□□ -0.08
CIT3P43635 BDH2YAL061W 1254 nt14.5□□□□□ -0.09
CIT3P43635 FPR4YLR449W 1179 nt14.5□□□□□ -0.09
CIT3P43635 INM2YDR287W 879 nt14.48□□□□□ -0.09
CIT3P43635 PHO4YFR034C 939 nt14.41□□□□□ -0.1
CIT3P43635 YBL100CYBL100C 315 nt14.41□□□□□ -0.1
CIT3P43635 YFL021C-AYFL021C-A 855 nt14.39□□□□□ -0.11
CIT3P43635 RKM5YLR137W 1104 nt14.34□□□□□ -0.11
CIT3P43635 NPL3YDR432W 1245 nt14.32□□□□□ -0.12
CIT3P43635 LSM3YLR438C-A 270 nt14.29□□□□□ -0.12
CIT3P43635 FUN26YAL022C 1554 nt14.25□□□□□ -0.13
CIT3P43635 YOL037CYOL037C 354 nt14.23□□□□□ -0.13
CIT3P43635 TRM9YML014W 840 nt14.19□□□□□ -0.14
CIT3P43635 YPS1YLR120C 1710 nt14.1□□□□□ -0.15
CIT3P43635 SPT5YML010W 3192 nt14.1□□□□□ -0.15
CIT3P43635 CCT6YDR188W 1641 nt14.08□□□□□ -0.16
CIT3P43635 YDR095CYDR095C 411 nt14.03□□□□□ -0.16
CIT3P43635 ALF1YNL148C 765 nt13.98□□□□□ -0.17
CIT3P43635 tM(CAU)CtM(CAU)C 72 nt13.95□□□□□ -0.18
CIT3P43635 IMT4tM(CAU)E 72 nt13.95□□□□□ -0.18
CIT3P43635 IMT3tM(CAU)J3 72 nt13.95□□□□□ -0.18
CIT3P43635 IMT1tM(CAU)O1 72 nt13.95□□□□□ -0.18
CIT3P43635 IMT2tM(CAU)P 72 nt13.95□□□□□ -0.18
CIT3P43635 YLR281CYLR281C 468 nt13.93□□□□□ -0.18
CIT3P43635 YHR165W-AYHR165W-A 312 nt13.92□□□□□ -0.18
CIT3P43635 SUF2tP(AGG)C 72 nt13.89□□□□□ -0.19
CIT3P43635 SUF10tP(AGG)N 72 nt13.89□□□□□ -0.19
CIT3P43635 WHI5YOR083W 888 nt13.89□□□□□ -0.19
CIT3P43635 MEP2YNL142W 1500 nt13.88□□□□□ -0.19
CIT3P43635 PUS2YGL063W 1113 nt13.82□□□□□ -0.2
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms