Protein–RNA interactions for Protein: Q08919

TRE1, Uncharacterized protein TRE1, yeastyeast

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRE1Q08919 YML009W-BYML009W-B 477 nt21.65■■□□□ 1.06
TRE1Q08919 NSR1YGR159C 1245 nt21.46■■□□□ 1.03
TRE1Q08919 NOP1YDL014W 984 nt21.05■□□□□ 0.96
TRE1Q08919 YKL036CYKL036C 393 nt19.49■□□□□ 0.71
TRE1Q08919 MDJ1YFL016C 1536 nt19.02■□□□□ 0.64
TRE1Q08919 Q0297Q0297 156 nt18.44■□□□□ 0.54
TRE1Q08919 SRX1YKL086W 384 nt18.4■□□□□ 0.54
TRE1Q08919 YJL027CYJL027C 417 nt18.21■□□□□ 0.51
TRE1Q08919 SCS3YGL126W 1143 nt17.75■□□□□ 0.43
TRE1Q08919 YCR051WYCR051W 669 nt17.49■□□□□ 0.39
TRE1Q08919 YOL085CYOL085C 342 nt16.89■□□□□ 0.29
TRE1Q08919 DBP2YNL112W 1641 nt16.85■□□□□ 0.29
TRE1Q08919 PKP1YIL042C 1185 nt16.66■□□□□ 0.26
TRE1Q08919 TRN1tP(UGG)A 72 nt16.6■□□□□ 0.25
TRE1Q08919 SUF9tP(UGG)F 72 nt16.6■□□□□ 0.25
TRE1Q08919 SUF8tP(UGG)H 72 nt16.6■□□□□ 0.25
TRE1Q08919 tP(UGG)LtP(UGG)L 72 nt16.6■□□□□ 0.25
TRE1Q08919 SUF7tP(UGG)M 72 nt16.6■□□□□ 0.25
TRE1Q08919 tP(UGG)N1tP(UGG)N1 72 nt16.6■□□□□ 0.25
TRE1Q08919 tP(UGG)N2tP(UGG)N2 72 nt16.6■□□□□ 0.25
TRE1Q08919 tP(UGG)O1tP(UGG)O1 72 nt16.6■□□□□ 0.25
TRE1Q08919 SUF11tP(UGG)O2 72 nt16.6■□□□□ 0.25
TRE1Q08919 RPP1BYDL130W 321 nt16.56■□□□□ 0.24
TRE1Q08919 CCC1YLR220W 969 nt16.48■□□□□ 0.23
TRE1Q08919 YBR190WYBR190W 312 nt16.19■□□□□ 0.18
TRE1Q08919 ATS1YAL020C 1002 nt15.9■□□□□ 0.14
TRE1Q08919 RTC3YHR087W 336 nt15.86■□□□□ 0.13
TRE1Q08919 PET122YER153C 765 nt15.83■□□□□ 0.12
TRE1Q08919 RVS167YDR388W 1449 nt15.83■□□□□ 0.12
TRE1Q08919 SCJ1YMR214W 1134 nt15.77■□□□□ 0.12
TRE1Q08919 tP(UGG)O3tP(UGG)O3 72 nt15.74■□□□□ 0.11
TRE1Q08919 SCR1SCR1 522 nt15.66■□□□□ 0.1
TRE1Q08919 RRN5YLR141W 1092 nt15.4■□□□□ 0.06
TRE1Q08919 SHR5YOL110W 714 nt15.3■□□□□ 0.04
TRE1Q08919 YDJ1YNL064C 1230 nt15.22■□□□□ 0.03
TRE1Q08919 YER088W-BYER088W-B 147 nt15.08■□□□□ 0
TRE1Q08919 RSB1YOR049C 1065 nt15.08■□□□□ 0
TRE1Q08919 GAR1YHR089C 618 nt14.9□□□□□ -0.02
TRE1Q08919 DEP1YAL013W 1218 nt14.89□□□□□ -0.03
TRE1Q08919 URN1YPR152C 1398 nt14.86□□□□□ -0.03
TRE1Q08919 PUT4YOR348C 1884 nt14.76□□□□□ -0.05
TRE1Q08919 PST2YDR032C 597 nt14.73□□□□□ -0.05
TRE1Q08919 YNL208WYNL208W 600 nt14.63□□□□□ -0.07
TRE1Q08919 RPN10YHR200W 807 nt14.62□□□□□ -0.07
TRE1Q08919 OPI9YLR338W 858 nt14.62□□□□□ -0.07
TRE1Q08919 SAH1YER043C 1350 nt14.54□□□□□ -0.08
TRE1Q08919 SSA3YBL075C 1950 nt14.51□□□□□ -0.09
TRE1Q08919 ARE1YCR048W 1833 nt14.41□□□□□ -0.1
TRE1Q08919 TIR1YER011W 765 nt14.38□□□□□ -0.11
TRE1Q08919 POA1YBR022W 534 nt14.29□□□□□ -0.12
TRE1Q08919 YHR049C-AYHR049C-A 297 nt14.23□□□□□ -0.13
TRE1Q08919 SSA1YAL005C 1929 nt14.2□□□□□ -0.14
TRE1Q08919 PUN1YLR414C 792 nt14.19□□□□□ -0.14
TRE1Q08919 YJR018WYJR018W 363 nt14.18□□□□□ -0.14
TRE1Q08919 YKL097CYKL097C 411 nt14.16□□□□□ -0.14
TRE1Q08919 SHU1YHL006C 453 nt14.12□□□□□ -0.15
TRE1Q08919 PTC2YER089C 1395 nt14.03□□□□□ -0.16
TRE1Q08919 BSC6YOL137W 1494 nt14.03□□□□□ -0.16
TRE1Q08919 SRB2YHR041C 633 nt13.99□□□□□ -0.17
TRE1Q08919 YJR120WYJR120W 351 nt13.97□□□□□ -0.17
TRE1Q08919 BUD23YCR047C 828 nt13.93□□□□□ -0.18
TRE1Q08919 YAL037C-BYAL037C-B 975 nt13.93□□□□□ -0.18
TRE1Q08919 RPP2BYDR382W 333 nt13.89□□□□□ -0.19
TRE1Q08919 NAB2YGL122C 1578 nt13.81□□□□□ -0.2
TRE1Q08919 WWM1YFL010C 636 nt13.77□□□□□ -0.21
TRE1Q08919 INM2YDR287W 879 nt13.67□□□□□ -0.22
TRE1Q08919 YGR021WYGR021W 873 nt13.66□□□□□ -0.22
TRE1Q08919 FPR4YLR449W 1179 nt13.66□□□□□ -0.22
TRE1Q08919 DAL1YIR027C 1383 nt13.64□□□□□ -0.23
TRE1Q08919 HOM6YJR139C 1080 nt13.64□□□□□ -0.23
TRE1Q08919 BDH2YAL061W 1254 nt13.63□□□□□ -0.23
TRE1Q08919 FIS1YIL065C 468 nt13.61□□□□□ -0.23
TRE1Q08919 YOR139CYOR139C 393 nt13.6□□□□□ -0.23
TRE1Q08919 MNP1YGL068W 585 nt13.59□□□□□ -0.23
TRE1Q08919 SPT5YML010W 3192 nt13.59□□□□□ -0.23
TRE1Q08919 YBL100CYBL100C 315 nt13.53□□□□□ -0.24
TRE1Q08919 YFL021C-AYFL021C-A 855 nt13.52□□□□□ -0.25
TRE1Q08919 PHO4YFR034C 939 nt13.51□□□□□ -0.25
TRE1Q08919 NPL3YDR432W 1245 nt13.46□□□□□ -0.25
TRE1Q08919 LSM3YLR438C-A 270 nt13.45□□□□□ -0.26
TRE1Q08919 RKM5YLR137W 1104 nt13.44□□□□□ -0.26
TRE1Q08919 FUN26YAL022C 1554 nt13.39□□□□□ -0.27
TRE1Q08919 TRM9YML014W 840 nt13.38□□□□□ -0.27
TRE1Q08919 YOL037CYOL037C 354 nt13.35□□□□□ -0.27
TRE1Q08919 SSA4YER103W 1929 nt13.23□□□□□ -0.29
TRE1Q08919 YPS1YLR120C 1710 nt13.23□□□□□ -0.29
TRE1Q08919 CCT6YDR188W 1641 nt13.21□□□□□ -0.29
TRE1Q08919 ALF1YNL148C 765 nt13.19□□□□□ -0.3
TRE1Q08919 MEP2YNL142W 1500 nt13.18□□□□□ -0.3
TRE1Q08919 YDR095CYDR095C 411 nt13.16□□□□□ -0.3
TRE1Q08919 YHR165W-AYHR165W-A 312 nt13.1□□□□□ -0.31
TRE1Q08919 SUF2tP(AGG)C 72 nt13.09□□□□□ -0.31
TRE1Q08919 SUF10tP(AGG)N 72 nt13.09□□□□□ -0.31
TRE1Q08919 tM(CAU)CtM(CAU)C 72 nt13.08□□□□□ -0.32
TRE1Q08919 IMT4tM(CAU)E 72 nt13.08□□□□□ -0.32
TRE1Q08919 IMT3tM(CAU)J3 72 nt13.08□□□□□ -0.32
TRE1Q08919 IMT1tM(CAU)O1 72 nt13.08□□□□□ -0.32
TRE1Q08919 IMT2tM(CAU)P 72 nt13.08□□□□□ -0.32
TRE1Q08919 YLR281CYLR281C 468 nt13.07□□□□□ -0.32
TRE1Q08919 WHI5YOR083W 888 nt13.03□□□□□ -0.32
Retrieved 100 of 7,029 protein–RNA pairs in 10.3 ms