Protein–RNA interactions for Protein: P38344

REI1, Cytoplasmic 60S subunit biogenesis factor REI1, yeastyeast

Predicted RBP Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
REI1P38344 NSR1YGR159C 1245 nt21.5■■□□□ 1.03
REI1P38344 YML009W-BYML009W-B 477 nt21.16■□□□□ 0.98
REI1P38344 NOP1YDL014W 984 nt20.34■□□□□ 0.85
REI1P38344 MDJ1YFL016C 1536 nt19.59■□□□□ 0.73
REI1P38344 YKL036CYKL036C 393 nt18.3■□□□□ 0.52
REI1P38344 YJL027CYJL027C 417 nt18■□□□□ 0.47
REI1P38344 SRX1YKL086W 384 nt17.81■□□□□ 0.44
REI1P38344 Q0297Q0297 156 nt17.68■□□□□ 0.42
REI1P38344 DBP2YNL112W 1641 nt17.17■□□□□ 0.34
REI1P38344 YBR190WYBR190W 312 nt16.83■□□□□ 0.28
REI1P38344 YCR051WYCR051W 669 nt16.82■□□□□ 0.28
REI1P38344 TRN1tP(UGG)A 72 nt16.42■□□□□ 0.22
REI1P38344 SUF9tP(UGG)F 72 nt16.42■□□□□ 0.22
REI1P38344 SUF8tP(UGG)H 72 nt16.42■□□□□ 0.22
REI1P38344 tP(UGG)LtP(UGG)L 72 nt16.42■□□□□ 0.22
REI1P38344 SUF7tP(UGG)M 72 nt16.42■□□□□ 0.22
REI1P38344 tP(UGG)N1tP(UGG)N1 72 nt16.42■□□□□ 0.22
REI1P38344 tP(UGG)N2tP(UGG)N2 72 nt16.42■□□□□ 0.22
REI1P38344 tP(UGG)O1tP(UGG)O1 72 nt16.42■□□□□ 0.22
REI1P38344 SUF11tP(UGG)O2 72 nt16.42■□□□□ 0.22
REI1P38344 SCS3YGL126W 1143 nt16.41■□□□□ 0.22
REI1P38344 RTC3YHR087W 336 nt16.39■□□□□ 0.21
REI1P38344 CCC1YLR220W 969 nt16.22■□□□□ 0.19
REI1P38344 SSA3YBL075C 1950 nt15.97■□□□□ 0.15
REI1P38344 RVS167YDR388W 1449 nt15.94■□□□□ 0.14
REI1P38344 YOL085CYOL085C 342 nt15.89■□□□□ 0.13
REI1P38344 RPP1BYDL130W 321 nt15.85■□□□□ 0.13
REI1P38344 SCJ1YMR214W 1134 nt15.81■□□□□ 0.12
REI1P38344 PUT4YOR348C 1884 nt15.73■□□□□ 0.11
REI1P38344 PKP1YIL042C 1185 nt15.7■□□□□ 0.1
REI1P38344 tP(UGG)O3tP(UGG)O3 72 nt15.35■□□□□ 0.05
REI1P38344 SHR5YOL110W 714 nt15.29■□□□□ 0.04
REI1P38344 ARE1YCR048W 1833 nt15.29■□□□□ 0.04
REI1P38344 PET122YER153C 765 nt15.22■□□□□ 0.03
REI1P38344 URN1YPR152C 1398 nt15.19■□□□□ 0.02
REI1P38344 POA1YBR022W 534 nt15.16■□□□□ 0.02
REI1P38344 SAH1YER043C 1350 nt15.13■□□□□ 0.01
REI1P38344 OPI9YLR338W 858 nt15.08■□□□□ 0
REI1P38344 YHR049C-AYHR049C-A 297 nt15.05■□□□□ -0
REI1P38344 DEP1YAL013W 1218 nt15.02■□□□□ -0
REI1P38344 BSC6YOL137W 1494 nt14.94□□□□□ -0.02
REI1P38344 SCR1SCR1 522 nt14.87□□□□□ -0.03
REI1P38344 YDJ1YNL064C 1230 nt14.86□□□□□ -0.03
REI1P38344 RPN10YHR200W 807 nt14.8□□□□□ -0.04
REI1P38344 YNL208WYNL208W 600 nt14.73□□□□□ -0.05
REI1P38344 SPT5YML010W 3192 nt14.73□□□□□ -0.05
REI1P38344 RRN5YLR141W 1092 nt14.72□□□□□ -0.05
REI1P38344 BUD23YCR047C 828 nt14.64□□□□□ -0.07
REI1P38344 PUN1YLR414C 792 nt14.61□□□□□ -0.07
REI1P38344 GAR1YHR089C 618 nt14.59□□□□□ -0.07
REI1P38344 PTC2YER089C 1395 nt14.54□□□□□ -0.08
REI1P38344 ATS1YAL020C 1002 nt14.52□□□□□ -0.09
REI1P38344 YJR018WYJR018W 363 nt14.45□□□□□ -0.1
REI1P38344 YER088W-BYER088W-B 147 nt14.44□□□□□ -0.1
REI1P38344 NAB2YGL122C 1578 nt14.43□□□□□ -0.1
REI1P38344 SSA4YER103W 1929 nt14.39□□□□□ -0.11
REI1P38344 RSB1YOR049C 1065 nt14.23□□□□□ -0.13
REI1P38344 FIS1YIL065C 468 nt14.2□□□□□ -0.14
REI1P38344 YJR120WYJR120W 351 nt14.18□□□□□ -0.14
REI1P38344 TIR1YER011W 765 nt14.14□□□□□ -0.15
REI1P38344 DAL1YIR027C 1383 nt14.13□□□□□ -0.15
REI1P38344 SSA1YAL005C 1929 nt14.11□□□□□ -0.15
REI1P38344 MEP2YNL142W 1500 nt14.09□□□□□ -0.15
REI1P38344 FPR4YLR449W 1179 nt14.06□□□□□ -0.16
REI1P38344 PHO4YFR034C 939 nt14.01□□□□□ -0.17
REI1P38344 INM2YDR287W 879 nt14□□□□□ -0.17
REI1P38344 RPP2BYDR382W 333 nt13.98□□□□□ -0.17
REI1P38344 YPS1YLR120C 1710 nt13.95□□□□□ -0.18
REI1P38344 BDF1YLR399C 2061 nt13.92□□□□□ -0.18
REI1P38344 DCW1YKL046C 1350 nt13.86□□□□□ -0.19
REI1P38344 SRB2YHR041C 633 nt13.81□□□□□ -0.2
REI1P38344 YHR165W-AYHR165W-A 312 nt13.78□□□□□ -0.2
REI1P38344 YBL100CYBL100C 315 nt13.78□□□□□ -0.2
REI1P38344 YDR095CYDR095C 411 nt13.77□□□□□ -0.21
REI1P38344 TAT1YBR069C 1860 nt13.72□□□□□ -0.21
REI1P38344 BDH2YAL061W 1254 nt13.66□□□□□ -0.22
REI1P38344 EMI2YDR516C 1503 nt13.65□□□□□ -0.22
REI1P38344 FUN26YAL022C 1554 nt13.61□□□□□ -0.23
REI1P38344 YBR220CYBR220C 1683 nt13.59□□□□□ -0.23
REI1P38344 PST2YDR032C 597 nt13.57□□□□□ -0.24
REI1P38344 YMR090WYMR090W 684 nt13.55□□□□□ -0.24
REI1P38344 PTP1YDL230W 1008 nt13.54□□□□□ -0.24
REI1P38344 CAC2YML102W 1407 nt13.52□□□□□ -0.25
REI1P38344 YDL221WYDL221W 552 nt13.51□□□□□ -0.25
REI1P38344 ALF1YNL148C 765 nt13.49□□□□□ -0.25
REI1P38344 RPP2AYOL039W 321 nt13.49□□□□□ -0.25
REI1P38344 TRM9YML014W 840 nt13.46□□□□□ -0.25
REI1P38344 SDH1YKL148C 1923 nt13.45□□□□□ -0.26
REI1P38344 WWM1YFL010C 636 nt13.44□□□□□ -0.26
REI1P38344 CCT6YDR188W 1641 nt13.39□□□□□ -0.27
REI1P38344 LSM3YLR438C-A 270 nt13.38□□□□□ -0.27
REI1P38344 SIS1YNL007C 1059 nt13.36□□□□□ -0.27
REI1P38344 IRC15YPL017C 1500 nt13.32□□□□□ -0.28
REI1P38344 SCC4YER147C 1875 nt13.29□□□□□ -0.28
REI1P38344 SUF2tP(AGG)C 72 nt13.27□□□□□ -0.29
REI1P38344 SUF10tP(AGG)N 72 nt13.27□□□□□ -0.29
REI1P38344 GIS3YLR094C 1509 nt13.23□□□□□ -0.29
REI1P38344 YFL021C-AYFL021C-A 855 nt13.22□□□□□ -0.29
REI1P38344 Q0182Q0182 405 nt13.2□□□□□ -0.3
REI1P38344 ART5YGR068C 1761 nt13.2□□□□□ -0.3
Retrieved 100 of 7,029 protein–RNA pairs in 55.4 ms